BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	578,967	T→C	intergenic (‑108/‑136)	ybcV ← / → ybcW	putative envelope protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	578,967	0	T	C	100.0%	591.4 / NA	186	intergenic (‑108/‑136)	ybcV/ybcW	putative envelope protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (97/89); total (97/89)

Only 100 of 195 total aligned reads displayed.

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

cAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAgcgc                                                                                         <  2:974105/93‑1 (MQ=255)

cAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAgcgc                                                                                         <  1:2208133/93‑1 (MQ=255)

 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        >  2:653810/1‑93 (MQ=255)

 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        >  2:2667409/1‑93 (MQ=255)

 aaTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGcgcg                                                                                        <  2:1816878/93‑1 (MQ=255)

      ggTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCct                                                                                   <  2:3528304/93‑1 (MQ=255)

      ggTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCct                                                                                   >  1:292163/1‑93 (MQ=255)

       gTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctg                                                                                  >  2:325155/1‑93 (MQ=255)

       gTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctg                                                                                  >  1:1838967/1‑93 (MQ=255)

        tCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgc                                                                                 <  2:4366750/93‑1 (MQ=255)

        gcTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgc                                                                                 <  1:2856616/92‑1 (MQ=255)

          tGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgctg                                                                               >  1:3832063/1‑93 (MQ=255)

           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              >  2:2198114/1‑93 (MQ=255)

           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              >  2:2260332/1‑93 (MQ=255)

            aCCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGc                                                                             <  1:4614640/93‑1 (MQ=255)

            aCCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGc                                                                             >  1:4605074/1‑93 (MQ=255)

             ccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCa                                                                            <  1:963687/93‑1 (MQ=255)

             ccTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCa                                                                            >  1:1025415/1‑93 (MQ=255)

               tctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAtt                                                                          >  2:1444062/1‑93 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACCAAGCGCGGTCCTGCTGGCATTc                                                                         >  2:2354922/1‑93 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         >  2:2989362/1‑93 (MQ=255)

                 tttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCt                                                                        >  1:2647621/1‑93 (MQ=255)

                  ttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTg                                                                       <  1:707976/93‑1 (MQ=255)

                   tgtgTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTgg                                                                      >  2:4464135/1‑93 (MQ=255)

                   tgtgTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAAC‑AAGCGCGGGCCTGCTGGCATTCTGGa                                                                     >  2:1786737/1‑93 (MQ=255)

                    gtgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     >  1:2895085/1‑93 (MQ=255)

                    gtgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     >  2:1697597/1‑93 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  2:3447986/93‑1 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  2:4216678/93‑1 (MQ=255)

                      gtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAgg                                                                   >  1:4444033/1‑93 (MQ=255)

                           gttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAAt                                                              >  1:397461/1‑93 (MQ=255)

                              gatgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACa                                                           >  2:395415/1‑93 (MQ=255)

                              gatgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACa                                                           >  1:2342746/1‑93 (MQ=255)

                               atgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACaa                                                          <  2:108425/93‑1 (MQ=255)

                                tgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                         <  1:371952/93‑1 (MQ=255)

                                tgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCGGCTGGCATTCTGGAGGGAAAGACAAc                                                         <  2:262322/93‑1 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        <  2:3596214/93‑1 (MQ=255)

                                     tATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACa                                                    >  1:1737636/1‑93 (MQ=255)

                                     tATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACa                                                    <  2:4259927/93‑1 (MQ=255)

                                       tGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGa                                                  >  1:2286951/1‑93 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 >  2:2141999/1‑93 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 <  1:1380337/93‑1 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 <  2:1025111/93‑1 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 >  2:2494033/1‑93 (MQ=255)

                                         tCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatg                                                >  2:1985528/1‑93 (MQ=255)

                                            aaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtat                                             <  2:2507677/93‑1 (MQ=255)

                                              tatTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtatgt                                           <  2:1974336/93‑1 (MQ=255)

                                               atTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGAtgtatgta                                          >  2:3370912/1‑93 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  2:4316300/93‑1 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  1:835885/93‑1 (MQ=255)

                                                ttAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTaa                                         <  2:4586228/93‑1 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        <  1:4135615/93‑1 (MQ=255)

                                                   ggAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGc                                      >  1:3601760/1‑93 (MQ=255)

                                                     aaTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCa                                    >  1:1007783/1‑93 (MQ=255)

                                                      aTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCaa                                   >  1:4105972/1‑93 (MQ=255)

                                                      aTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCaa                                   <  1:480049/93‑1 (MQ=255)

                                                       tGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAAc                                  >  1:3211919/1‑93 (MQ=255)

                                                       tGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAAc                                  >  1:1615601/1‑93 (MQ=255)

                                                         ttttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGt                                >  2:1417698/1‑93 (MQ=255)

                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          >  1:314734/1‑93 (MQ=255)

                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          <  1:4277340/93‑1 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         <  1:3941025/93‑1 (MQ=255)

                                                                  aaTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAcc                       >  2:2715674/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  1:4179359/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      >  1:270956/1‑93 (MQ=255)

                                                                   aTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      <  2:1587319/93‑1 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     >  1:619228/1‑93 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     >  2:567036/1‑93 (MQ=255)

                                                                      gTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCa                   >  1:1634368/1‑93 (MQ=255)

                                                                      gTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCa                   <  1:2964532/93‑1 (MQ=255)

                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  2:3716185/1‑93 (MQ=255)

                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  <  2:2873378/93‑1 (MQ=255)

                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  <  1:2109054/93‑1 (MQ=255)

                                                                        aTTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 >  1:1682795/1‑93 (MQ=255)

                                                                        aTTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 >  2:2691390/1‑93 (MQ=255)

                                                                        aTTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 >  2:4344484/1‑93 (MQ=255)

                                                                         ttGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATAc                >  1:1095942/1‑93 (MQ=255)

                                                                          tGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACa               <  2:840393/93‑1 (MQ=255)

                                                                          tGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACa               >  2:2553035/1‑93 (MQ=255)

                                                                          tGGTCGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACa               <  2:1526835/93‑1 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  2:4054252/93‑1 (MQ=255)

                                                                               gCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAg          >  2:1561696/1‑93 (MQ=255)

                                                                                cGTAACAAAGCGCGGTCGTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGa         <  2:2936385/93‑1 (MQ=255)

                                                                                 gTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAATCGTCAGATGGTTGTATGGCCAACGTGCTCAAACCTTCATACAGAATGag        >  1:4684153/1‑92 (MQ=255)

                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       >  1:4497372/1‑93 (MQ=255)

                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       <  1:2530436/93‑1 (MQ=255)

                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       <  1:3864863/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  2:3636957/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  1:3463829/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  1:2983361/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  2:2027594/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  2:2116465/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      >  1:1969669/1‑93 (MQ=255)

                                                                                    aCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttta     >  1:3580653/1‑92 (MQ=255)

                                                                                    aCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTg     <  2:3871780/93‑1 (MQ=255)

                                                                                     cAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGa    >  1:2047317/1‑93 (MQ=255)

                                                                                     cAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGa    >  1:851856/1‑93 (MQ=255)

                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   <  2:4682201/93‑1 (MQ=255)

                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   <  1:4597806/93‑1 (MQ=255)

                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTTAAg  <  2:1892548/93‑1 (MQ=255)

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`