BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	585,842	A→G	V97A (GTG→GCG)	envY ←	envelope protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	585,842	0	A	G	100.0%	474.0 / NA	152	V97A (GTG→GCG)	envY	envelope protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (72/80); total (72/80)

Only 100 of 159 total aligned reads displayed.

ACAATACGGTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACACTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAAACAAC  >  NC_000913/585753‑585931

aCAATACGGTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCtt                                                                                        <  2:4671978/93‑1 (MQ=255)

 cAATACGGTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTc                                                                                       >  1:2066512/1‑93 (MQ=255)

  aaTACGGTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTcc                                                                                      >  1:2703525/1‑93 (MQ=255)

  aaTACGGTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTcc                                                                                      <  1:2469430/93‑1 (MQ=255)

   aTACGGTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCg                                                                                     <  2:3807433/93‑1 (MQ=255)

       ggTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTATCCGGAACGCTTCCGgtgt                                                                                 >  1:4241181/1‑93 (MQ=255)

       ggTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTACACGGAACGCTTCCGgtgt                                                                                 >  1:2349055/1‑93 (MQ=255)

        gTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTa                                                                                >  1:1131308/1‑93 (MQ=255)

        gTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTa                                                                                >  1:686961/1‑93 (MQ=255)

        gTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTa                                                                                >  2:3787863/1‑93 (MQ=255)

        gTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTa                                                                                >  2:4047170/1‑93 (MQ=255)

            aaaGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGc                                                                            >  2:3288858/1‑93 (MQ=255)

            aaaGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGc                                                                            <  1:3772734/93‑1 (MQ=255)

            aaaGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGc                                                                            <  2:1559102/93‑1 (MQ=255)

            aaaGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGc                                                                            >  1:1303131/1‑93 (MQ=255)

             aaGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCt                                                                           >  1:4344863/1‑93 (MQ=255)

               gCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTAt                                                                         >  1:3778597/1‑93 (MQ=255)

               gCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTAt                                                                         <  2:2973823/93‑1 (MQ=255)

                  aTGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGAc                                                                      >  1:4634714/1‑93 (MQ=255)

                    gcgcgcGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACaa                                                                    <  2:4623372/93‑1 (MQ=255)

                      gcgcgTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGc                                                                  <  1:1181185/93‑1 (MQ=255)

                       cgcgTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCg                                                                 >  2:353799/1‑93 (MQ=255)

                        gcgTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGa                                                                >  2:2605263/1‑93 (MQ=255)

                         cgTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGAt                                                               <  1:4034523/93‑1 (MQ=255)

                           tCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATaa                                                             >  1:4674514/1‑93 (MQ=255)

                           tCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATaa                                                             >  2:66758/1‑93 (MQ=255)

                            cAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAAc                                                            <  2:27070/93‑1 (MQ=255)

                             aaCTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAAcc                                                           <  2:1317935/93‑1 (MQ=255)

                              aCTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCg                                                          >  2:4150485/1‑93 (MQ=255)

                               cTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCgg                                                         >  2:1075122/1‑93 (MQ=255)

                               cTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCgg                                                         <  2:1406513/93‑1 (MQ=255)

                               cTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCgg                                                         >  2:345255/1‑93 (MQ=255)

                               cTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCgg                                                         >  1:3081964/1‑93 (MQ=255)

                                tCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCggg                                                        <  2:2783505/93‑1 (MQ=255)

                                tCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCggg                                                        <  1:3146680/93‑1 (MQ=255)

                                tCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCggg                                                        <  2:2638903/93‑1 (MQ=255)

                                  cGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGt                                                      >  2:563880/1‑93 (MQ=255)

                                  cGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGt                                                      >  2:2474554/1‑93 (MQ=255)

                                    cTTCGCAGGGACTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGGTg                                                    >  1:4164141/1‑93 (MQ=255)

                                     ttCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGc                                                   >  2:443116/1‑93 (MQ=255)

                                     ttCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGc                                                   <  1:2387227/93‑1 (MQ=255)

                                        gCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAg                                                >  2:1045270/1‑93 (MQ=255)

                                         cAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGc                                               <  2:4419169/93‑1 (MQ=255)

                                         cAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGc                                               <  1:19082/93‑1 (MQ=255)

                                          aGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGcc                                              >  2:3662716/1‑93 (MQ=255)

                                           gggTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCcg                                             <  1:3315695/93‑1 (MQ=255)

                                           gggTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCcg                                             >  1:4103956/1‑93 (MQ=255)

                                            ggTCTGCTGGGTTGCTGCTTGCTGTGTTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCcgc                                            <  1:2565753/93‑1 (MQ=255)

                                            ggTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCcgc                                            <  1:2998669/93‑1 (MQ=255)

                                             gTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCcgcg                                           <  2:2530540/93‑1 (MQ=255)

                                             gTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCcgcg                                           >  1:1004959/1‑93 (MQ=255)

                                             gTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCcgcg                                           >  1:3595982/1‑93 (MQ=255)

                                              tCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGa                                          >  2:1756397/1‑93 (MQ=255)

                                              tCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGa                                          <  2:4541926/93‑1 (MQ=255)

                                               ctgctgGGTGGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCGGCCGCGAc                                         <  1:2902653/93‑1 (MQ=255)

                                                tgctgGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGAcc                                        >  2:681824/1‑93 (MQ=255)

                                                tgctgGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGAcc                                        <  2:759473/93‑1 (MQ=255)

                                                 gctgGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCa                                       <  2:2431982/93‑1 (MQ=255)

                                                  ctgGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAg                                      <  2:718969/93‑1 (MQ=255)

                                                   tgGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAgg                                     >  1:3742128/1‑93 (MQ=255)

                                                   tgGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAgg                                     <  2:170153/93‑1 (MQ=255)

                                                        tgctgcTTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCttt                                <  2:4117076/93‑1 (MQ=255)

                                                         gctgctTGTGGTGGTTGGCGGCTAGCGAGAGCGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTa                               <  2:2734591/93‑1 (MQ=255)

                                                          ctgctTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTac                              >  1:971064/1‑93 (MQ=255)

                                                          ctgctTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTac                              >  1:1758074/1‑93 (MQ=255)

                                                          ctgctTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTac                              <  2:1554761/93‑1 (MQ=255)

                                                          ctgctTGCTGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTac                              <  1:1460855/93‑1 (MQ=255)

                                                            gcttgctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTacac                            >  2:2345892/1‑93 (MQ=255)

                                                            gcttgctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTacac                            >  2:3101498/1‑93 (MQ=255)

                                                            gcttgctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTacac                            >  1:136542/1‑93 (MQ=255)

                                                              ttgctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACCGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAg                          <  2:503475/93‑1 (MQ=255)

                                                               tgctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAgg                         <  2:1494685/93‑1 (MQ=255)

                                                               tgctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAgg                         <  1:4131180/93‑1 (MQ=255)

                                                                gctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGt                        >  2:3703471/1‑93 (MQ=255)

                                                                 ctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGtt                       <  1:991971/93‑1 (MQ=255)

                                                                 ctGTGGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGtt                       <  1:4596243/93‑1 (MQ=255)

                                                                  tgtgGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTa                      <  2:446804/93‑1 (MQ=255)

                                                                   gtgGTTGGAGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTaa                     <  1:731664/93‑1 (MQ=255)

                                                                    tgGTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAg                    <  1:1045614/93‑1 (MQ=255)

                                                                     ggTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGt                   >  1:141057/1‑93 (MQ=255)

                                                                     ggTTGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGt                   <  2:1668720/93‑1 (MQ=255)

                                                                      gTTGCCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGtt                  <  1:4362144/93‑1 (MQ=255)

                                                                       ttGGCGGCTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTc                 <  1:3735476/93‑1 (MQ=255)

                                                                         ggcggcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCtt               <  1:2736482/93‑1 (MQ=255)

                                                                          gcggcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGTTTAAGTTCTTa              <  1:591537/93‑1 (MQ=255)

                                                                          gcggcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTa              <  2:3065738/93‑1 (MQ=255)

                                                                          gcggcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTa              >  2:882906/1‑93 (MQ=255)

                                                                            ggcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTAtt            >  2:1674235/1‑93 (MQ=255)

                                                                            ggcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTAtt            <  1:2443457/93‑1 (MQ=255)

                                                                            ggcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTAtt            <  2:2778515/93‑1 (MQ=255)

                                                                             gcTAGCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTAttt           >  1:2775698/1‑93 (MQ=255)

                                                                              cTAGCAGGAACGCTTCCGGGGGACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTa          <  1:4252576/93‑1 (MQ=255)

                                                                                 gCCGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTaaaa       <  1:1495436/93‑1 (MQ=255)

                                                                                  gcGGAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTAGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTaaaaa      <  1:4683295/92‑1 (MQ=255)

                                                                                    ggAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAaaca    >  2:1158766/1‑93 (MQ=255)

                                                                                    ggAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAaaca    >  1:2696389/1‑93 (MQ=255)

                                                                                    ggAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAaaca    >  1:2148398/1‑93 (MQ=255)

                                                                                     gAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAaacaa   >  2:2488136/1‑93 (MQ=255)

                                                                                     gAACGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAaacaa   >  2:3206634/1‑93 (MQ=255)

                                                                                      aaCGCTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAaacaac  <  1:1545318/93‑1 (MQ=255)

ACAATACGGTAAAAAGCAATGCGCGCGTCAACTCCGCTTCGCAGGGTCTGCTGGGTTGCTGCTTGCTGTGGTTGGCGGCTAGCCGGAACACTTCCGGTGTACGGCTATGACAAGCGATAACCGGGGTTGCCAGCCGCGACCAGGGCTTTACACAGGTTAAGTTCTTATTTAAAAACAAC  >  NC_000913/585753‑585931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`