BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	592,232	C→T	R57Q (CGA→CAA)	nfrB ←	NfrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	592,232	0	C	T	100.0%	569.5 / NA	156	R57Q (CGA→CAA)	nfrB	NfrB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (76/80); total (76/80)

Only 100 of 164 total aligned reads displayed.

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

atatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGCTTATACAGTTCGCGGTAACTCATTtgc                                                                                         >  2:4440064/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  2:2533974/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  1:620148/1‑93 (MQ=255)

  atTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCgg                                                                                       <  2:2234034/93‑1 (MQ=255)

   ttGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCggg                                                                                      >  1:2831890/1‑93 (MQ=255)

     gCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTa                                                                                    <  2:1240459/93‑1 (MQ=255)

     gCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTa                                                                                    <  2:2503644/93‑1 (MQ=255)

      ccGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAg                                                                                   <  2:4092139/93‑1 (MQ=255)

        gATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcg                                                                                 <  2:193178/93‑1 (MQ=255)

         aTGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcgg                                                                                >  1:2437919/1‑93 (MQ=255)

            aCGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGa                                                                             <  1:3410540/93‑1 (MQ=255)

              gCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATa                                                                           <  2:3848645/93‑1 (MQ=255)

                 cGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAac                                                                        <  1:3569430/93‑1 (MQ=255)

                  gTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAaca                                                                       <  2:2348238/93‑1 (MQ=255)

                  gTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAaca                                                                       >  1:378998/1‑93 (MQ=255)

                  gTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAaca                                                                       >  2:607290/1‑93 (MQ=255)

                  gTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAaca                                                                       <  1:354764/93‑1 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      >  2:1496058/1‑93 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      >  1:4584875/1‑93 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      >  2:2668898/1‑93 (MQ=255)

                     tCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTc                                                                    <  2:2846704/93‑1 (MQ=255)

                     tCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTc                                                                    <  1:672388/93‑1 (MQ=255)

                      cATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCa                                                                   <  2:4224283/93‑1 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 <  1:2970791/93‑1 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 <  2:2047214/93‑1 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 >  2:330132/1‑93 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 <  2:4462760/93‑1 (MQ=255)

                         tCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACt                                                                >  2:3469127/1‑93 (MQ=255)

                          ccACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACtt                                                               >  1:2949802/1‑93 (MQ=255)

                          ccACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACtt                                                               <  1:976623/93‑1 (MQ=255)

                          ccACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACtt                                                               <  2:3245704/93‑1 (MQ=255)

                            aCGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTTGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             >  1:1743310/1‑93 (MQ=255)

                            aCGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             <  2:1592468/93‑1 (MQ=255)

                            aCGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             >  2:3450081/1‑93 (MQ=255)

                              gCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGt                                                           <  1:3700592/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    <  1:1054725/93‑1 (MQ=255)

                                     ccATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgc                                                    <  2:1704016/93‑1 (MQ=255)

                                      cATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcg                                                   >  1:3921338/1‑93 (MQ=255)

                                       aTAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcgg                                                  >  2:1647694/1‑93 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 >  1:4183973/1‑93 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 >  1:1801706/1‑93 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGt                                               >  1:685471/1‑93 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGt                                               >  1:1630818/1‑93 (MQ=255)

                                          aTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCAATAAACACTCACCTTGCGTTTAATGCGGCGt                                               <  2:2532072/93‑1 (MQ=255)

                                           tCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTa                                              <  2:2686446/93‑1 (MQ=255)

                                            cGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAc                                             >  2:4052897/1‑93 (MQ=255)

                                             gCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAcc                                            >  1:1276081/1‑93 (MQ=255)

                                              cTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAccc                                           <  2:1720408/93‑1 (MQ=255)

                                              cTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAccc                                           >  1:1042757/1‑93 (MQ=255)

                                              cTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAccc                                           <  2:1454338/93‑1 (MQ=255)

                                              cTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTGTAATGCGGCGTAccc                                           >  1:3118072/1‑93 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          <  2:1885930/93‑1 (MQ=255)

                                                aaCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCAGCGTACCCAg                                         >  2:4077177/1‑93 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        <  1:1889007/93‑1 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        <  1:2206715/93‑1 (MQ=255)

                                                  cGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTa                                       <  2:4164059/93‑1 (MQ=255)

                                                  cGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGATTAATGCGGCGTACCAAGTa                                       >  1:3110563/1‑93 (MQ=255)

                                                   ggTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAg                                      >  2:59739/1‑93 (MQ=255)

                                                    gTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAga                                     <  1:3373197/93‑1 (MQ=255)

                                                     tttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgac                                    >  1:1245062/1‑93 (MQ=255)

                                                     tttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgac                                    <  1:1656947/93‑1 (MQ=255)

                                                     tttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCAGCGTACCCAGTAgac                                    <  1:2681310/93‑1 (MQ=255)

                                                      ttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgacg                                   >  2:512508/1‑93 (MQ=255)

                                                      ttttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACATGCGTTTAATGCGGCGTACCCAGTAgacg                                   >  2:908294/1‑93 (MQ=255)

                                                       tttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgacga                                  >  2:3285664/1‑93 (MQ=255)

                                                          cATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACAt                               >  1:824722/1‑93 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATc                              >  2:3748917/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACAtaa                             >  2:688303/1‑91 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCa                             >  2:431491/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCa                             >  1:2209692/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTCTAATGCGGCGTACCCAGTAGACGACATCa                             >  1:2522278/1‑93 (MQ=255)

                                                              tGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAAt                           >  2:769651/1‑93 (MQ=255)

                                                              tGGTTTATACACTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAGCTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAAt                           <  2:961893/93‑1 (MQ=255)

                                                                gTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaa                         >  2:1574152/1‑93 (MQ=255)

                                                                gTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaa                         >  1:4548996/1‑93 (MQ=255)

                                                                gTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaa                         >  2:3164908/1‑93 (MQ=255)

                                                                  ttATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaa                       >  1:3597989/1‑93 (MQ=255)

                                                                   tataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaa                      <  2:2189280/93‑1 (MQ=255)

                                                                    ataCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaa                     >  2:1959215/1‑93 (MQ=255)

                                                                     taCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaaa                    >  1:254278/1‑93 (MQ=255)

                                                                       cAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAAta                  >  2:1013408/1‑92 (MQ=255)

                                                                        aGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCg                 >  2:2621452/1‑93 (MQ=255)

                                                                         gTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGt                >  1:168987/1‑93 (MQ=255)

                                                                         gTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTCTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGt                <  1:3301430/93‑1 (MQ=255)

                                                                          ttCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTc               >  1:4017694/1‑93 (MQ=255)

                                                                          gtCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACGCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTc               <  2:234351/92‑1 (MQ=255)

                                                                           tCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTcc              <  1:1646822/93‑1 (MQ=255)

                                                                            cgcgGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCa             <  1:4189189/93‑1 (MQ=255)

                                                                            cgcgGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCa             <  1:3909803/93‑1 (MQ=255)

                                                                             gcgGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAg            <  2:387881/93‑1 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          >  1:2850921/1‑93 (MQ=255)

                                                                                gTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGccc         <  1:3774959/93‑1 (MQ=255)

                                                                                   aCTCATTTGCGGGTAGCGGCGATAAACGCTCAACTTGCGTTTATTGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCt      <  2:4621432/93‑1 (MQ=255)

                                                                                   aCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCt      <  1:473537/93‑1 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    >  2:3020275/1‑93 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    <  2:4600170/93‑1 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    <  1:523914/93‑1 (MQ=255)

                                                                                      cATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgat   >  2:4617148/1‑93 (MQ=255)

                                                                                      cATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgat   >  1:242319/1‑93 (MQ=255)

                                                                                       aTTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgatg  <  1:428029/93‑1 (MQ=255)

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`