BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	595,469	A→G	Q216R (CAG→CGG)	ylcB →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	595,469	0	A	G	100.0%	544.3 / NA	174	Q216R (CAG→CGG)	ylcB	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/72); total (102/72)

Only 100 of 179 total aligned reads displayed.

GAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595381‑595558

gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       <  2:3276071/93‑1 (MQ=255)

gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       <  1:1587543/93‑1 (MQ=255)

gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       >  1:1607201/1‑93 (MQ=255)

     aaCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCgg                                                                                  >  2:267815/1‑93 (MQ=255)

      aCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCggg                                                                                 >  2:1153268/1‑93 (MQ=255)

      aCGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCggg                                                                                 >  1:2666616/1‑93 (MQ=255)

        gCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCggggg                                                                               >  2:2462925/1‑92 (MQ=255)

        gCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGt                                                                               <  1:2791281/93‑1 (MQ=255)

        gCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGt                                                                               >  1:2038603/1‑93 (MQ=255)

          tGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGa                                                                             >  2:2802417/1‑93 (MQ=255)

           gCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGCGAt                                                                            >  2:202986/1‑93 (MQ=255)

             gTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAg                                                                          >  1:2111754/1‑93 (MQ=255)

              tAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGa                                                                         >  1:106409/1‑93 (MQ=255)

                    tCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAc                                                                   >  2:2116286/1‑93 (MQ=255)

                    tCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAc                                                                   >  1:1063327/1‑93 (MQ=255)

                      agcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAccc                                                                 <  2:2836225/93‑1 (MQ=255)

                       gcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCg                                                                >  2:3534525/1‑93 (MQ=255)

                       gcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAACCg                                                                >  2:2227419/1‑93 (MQ=255)

                         agTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCa                                                              <  1:3789122/93‑1 (MQ=255)

                         agTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCa                                                              <  1:1826498/93‑1 (MQ=255)

                           tCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGc                                                            >  1:118124/1‑93 (MQ=255)

                            cATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCg                                                           >  2:2901081/1‑93 (MQ=255)

                              tatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGAc                                                         >  2:4196153/1‑93 (MQ=255)

                              tatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGAc                                                         >  2:3781735/1‑93 (MQ=255)

                              tatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGAc                                                         >  1:346816/1‑93 (MQ=255)

                               atGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACa                                                        <  2:4025509/93‑1 (MQ=255)

                                tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       >  1:2823477/1‑93 (MQ=255)

                                tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       >  1:1134604/1‑93 (MQ=255)

                                 gCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATc                                                      >  1:4426768/1‑93 (MQ=255)

                                 gCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATc                                                      <  2:4423014/93‑1 (MQ=255)

                                   gTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGc                                                    >  2:2538230/1‑93 (MQ=255)

                                   gTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGc                                                    <  1:578569/93‑1 (MQ=255)

                                    tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCt                                                   >  1:276537/1‑93 (MQ=255)

                                    tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGGTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCt                                                   >  1:3951157/1‑93 (MQ=255)

                                     ttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTa                                                  >  1:4533875/1‑93 (MQ=255)

                                     ttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTa                                                  <  1:128542/93‑1 (MQ=255)

                                     ttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTa                                                  >  1:1479088/1‑93 (MQ=255)

                                       gTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTaaa                                                <  1:4245150/93‑1 (MQ=255)

                                       gTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTaaa                                                <  2:3438510/93‑1 (MQ=255)

                                        tCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAAc                                               <  1:1956334/93‑1 (MQ=255)

                                        tCGAAAAACAACTGTTGACAGATAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAAc                                               <  1:2185656/93‑1 (MQ=255)

                                          gAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGt                                             >  2:2161626/1‑93 (MQ=255)

                                          gAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGt                                             <  2:3665150/93‑1 (MQ=255)

                                           aaaaaCACTTGTTGACA‑GTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           <  2:2739825/93‑1 (MQ=255)

                                           aaaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTc                                            >  2:1025506/1‑93 (MQ=255)

                                            aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           >  1:1112582/1‑93 (MQ=255)

                                             aaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAg                                          <  2:1965517/93‑1 (MQ=255)

                                              aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         <  2:2642137/93‑1 (MQ=255)

                                              aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         <  1:3974519/93‑1 (MQ=255)

                                              aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         >  1:2011315/1‑93 (MQ=255)

                                              aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         >  2:4671189/1‑93 (MQ=255)

                                               acaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAGCCGCAGCGACATCGCTAAACGTCAggg                                        >  2:1119410/1‑93 (MQ=255)

                                               acaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggg                                        >  1:3348530/1‑93 (MQ=255)

                                                  acTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGa                                     >  1:4208216/1‑93 (MQ=255)

                                                  acTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGa                                     >  1:3084226/1‑93 (MQ=255)

                                                   cTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGaa                                    <  2:4384424/93‑1 (MQ=255)

                                                    tGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGCAc                                   >  1:704590/1‑93 (MQ=255)

                                                    tGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAAc                                   >  2:1805310/1‑93 (MQ=255)

                                                    tGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAAc                                   >  2:626750/1‑93 (MQ=255)

                                                    tGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAAc                                   <  1:3941327/93‑1 (MQ=255)

                                                      ttGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTg                                 >  2:1508893/1‑93 (MQ=255)

                                                      ttGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTg                                 <  1:729508/93‑1 (MQ=255)

                                                           aGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCa                            <  1:2306821/93‑1 (MQ=255)

                                                           aGGTAGCAGTAATGTTCTGGCGCCGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCa                            <  2:2193474/93‑1 (MQ=255)

                                                            ggcaGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGTAACTGGCGCAg                           >  2:3800602/4‑93 (MQ=255)

                                                            ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  1:863013/93‑1 (MQ=255)

                                                            ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  2:1844265/93‑1 (MQ=255)

                                                            ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  1:2992040/93‑1 (MQ=255)

                                                            ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  1:4066223/93‑1 (MQ=255)

                                                             gTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTCCCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAgg                          <  2:2692507/93‑1 (MQ=255)

                                                              tAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGc                         <  1:4644247/93‑1 (MQ=255)

                                                              tAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGGGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCGGGGGGAACTGGCGCAGGc                         >  1:3018890/1‑93 (MQ=255)

                                                               aGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCg                        >  1:3197038/1‑93 (MQ=255)

                                                                gCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGa                       >  1:354732/1‑93 (MQ=255)

                                                                gCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGa                       <  1:4021630/93‑1 (MQ=255)

                                                                gCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGa                       <  1:2924585/93‑1 (MQ=255)

                                                                 cAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaa                      <  2:3907410/93‑1 (MQ=255)

                                                                 cAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaa                      <  1:2449566/93‑1 (MQ=255)

                                                                  aGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaat                     >  1:949269/1‑93 (MQ=255)

                                                                    tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   <  2:1417144/93‑1 (MQ=255)

                                                                    tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGGGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   >  1:1167781/1‑93 (MQ=255)

                                                                      aTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATg                 <  1:4622228/93‑1 (MQ=255)

                                                                      aTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATg                 >  1:1242163/1‑93 (MQ=255)

                                                                      aTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATg                 >  2:3937655/1‑93 (MQ=255)

                                                                       tGTTCTGGTGCTGCAACGGGCTCACGGGGAGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGc                <  2:4559605/93‑1 (MQ=255)

                                                                        gTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCa               >  1:971588/1‑93 (MQ=255)

                                                                        gTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCa               >  1:81841/1‑93 (MQ=255)

                                                                         ttCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAt              >  1:32256/1‑93 (MQ=255)

                                                                         ttCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAt              >  1:3558183/1‑93 (MQ=255)

                                                                         ttCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAt              >  1:1779625/1‑93 (MQ=255)

                                                                          tCTGGCGCTGGAACGGGCTCGCGGGGCGATAGAAAGTACCCGCAACGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAtt             >  2:4307757/1‑93 (MQ=255)

                                                                            tGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGc           <  1:1967582/93‑1 (MQ=255)

                                                                              gcgcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCaa         <  1:4316601/93‑1 (MQ=255)

                                                                                 cTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCCTTGCAACTg      >  2:1172428/1‑93 (MQ=255)

                                                                                  tGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGt     >  2:3135589/1‑93 (MQ=255)

                                                                                   ggAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGtt    <  1:765938/93‑1 (MQ=255)

                                                                                   ggAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGtt    >  2:3843376/1‑93 (MQ=255)

                                                                                   ggAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGtt    >  1:52329/1‑93 (MQ=255)

                                                                                   ggAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGtt    <  1:3630734/93‑1 (MQ=255)

                                                                                   ggAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGAAACTGtt    >  1:260997/1‑93 (MQ=255)

GAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595381‑595558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`