BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	619,925	T→C	T163A (ACC→GCC)	fepG ←	FepG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	619,925	0	T	C	98.7%	465.7 / ‑3.5	150	T163A (ACC→GCC)	fepG	FepG
Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (69/79); total (69/81)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01

Only 100 of 151 total aligned reads displayed.

TTTTTGCCCACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGTATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGAGCAGCCAGA  >  NC_000913/619835‑620014

tttttGCCCACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCAt                                                                                         <  1:2575351/93‑1 (MQ=255)

tttttGCCCACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCAt                                                                                         <  2:354047/93‑1 (MQ=255)

 ttttGCCCACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCAtt                                                                                        >  2:4673915/1‑93 (MQ=255)

      cccACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAgg                                                                                   <  2:2693222/93‑1 (MQ=255)

       ccACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGc                                                                                  <  2:3818375/93‑1 (MQ=255)

       ccACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGc                                                                                  <  2:254494/93‑1 (MQ=255)

       ccACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGc                                                                                  <  2:1080449/93‑1 (MQ=255)

       ccACGTCAGGCCGTTGAGCGATCCCGGATTCCACAAACCTGCTGTTAGCGGCGTTTCTAAAGACGCTGTCAGCAACAGCCAGGCATTAAAGGc                                                                                  >  2:23982/1‑93 (MQ=255)

        cACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGcc                                                                                 >  2:2786430/1‑93 (MQ=255)

        cACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGcc                                                                                 >  1:2188852/1‑93 (MQ=255)

        cACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGcc                                                                                 >  2:2247992/1‑93 (MQ=255)

           gTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGccacc                                                                              <  2:4492476/93‑1 (MQ=255)

               ggCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCa                                                                          >  1:3776400/1‑93 (MQ=255)

                 ccGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATg                                                                        >  2:3185975/1‑93 (MQ=255)

                 ccGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATg                                                                        <  1:1977242/93‑1 (MQ=255)

                 ccGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATg                                                                        <  1:4199479/93‑1 (MQ=255)

                  cGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATgg                                                                       <  1:2626898/93‑1 (MQ=255)

                  cGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATgg                                                                       <  1:2285646/93‑1 (MQ=255)

                   gTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCGTGgc                                                                      >  1:1248951/1‑93 (MQ=255)

                   gTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGgc                                                                      <  1:4517660/93‑1 (MQ=255)

                   gTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGgc                                                                      >  2:3924872/1‑93 (MQ=255)

                     tGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGgcgc                                                                    <  2:2124258/93‑1 (MQ=255)

                      gAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGcgcg                                                                   >  1:4581672/1‑93 (MQ=255)

                        gCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGaa                                                                 >  2:212736/1‑93 (MQ=255)

                        gCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGaa                                                                 <  1:2852044/93‑1 (MQ=255)

                        gCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGaa                                                                 >  2:4254403/1‑93 (MQ=255)

                        gCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGaa                                                                 <  1:3313188/93‑1 (MQ=255)

                        gCGATCCGCCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGaa                                                                 <  2:1664262/93‑1 (MQ=255)

                          gATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACg                                                               >  1:915395/1‑93 (MQ=255)

                             ccGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccg                                                            <  1:4162141/93‑1 (MQ=255)

                              cGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccga                                                           <  2:3588256/93‑1 (MQ=255)

                               ggCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgat                                                          >  2:1634252/1‑93 (MQ=255)

                               ggCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgat                                                          >  2:971651/1‑93 (MQ=255)

                                gCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgata                                                         <  1:2457567/93‑1 (MQ=255)

                                gCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgata                                                         >  2:351701/1‑93 (MQ=255)

                                 cATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGTATTAAAGGCCACCAGCATGGCGCGAACGccgatac                                                        <  1:3674442/93‑1 (MQ=255)

                                 cATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgatac                                                        <  2:808158/93‑1 (MQ=255)

                                  aTTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgatacc                                                       >  2:422685/1‑93 (MQ=255)

                                  aTTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgatacc                                                       >  1:4582152/1‑93 (MQ=255)

                                   ttCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgataccg                                                      >  1:4315146/1‑93 (MQ=255)

                                   ttCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgataccg                                                      >  2:461084/1‑93 (MQ=255)

                                    tCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgataccga                                                     <  2:2562258/93‑1 (MQ=255)

                                    tCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGccgataccga                                                     <  2:4048991/93‑1 (MQ=255)

                                       acaAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGataa                                                  <  1:4294936/93‑1 (MQ=255)

                                       acaAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGataa                                                  <  2:622033/93‑1 (MQ=255)

                                       acaAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGataa                                                  <  2:1252233/93‑1 (MQ=255)

                                         aaaCCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGataata                                                >  2:849145/1‑93 (MQ=255)

                                         aaaCCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGataata                                                <  1:1837105/93‑1 (MQ=255)

                                            ccTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATc                                             <  1:795585/93‑1 (MQ=255)

                                            ccTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATc                                             <  1:3674956/93‑1 (MQ=255)

                                             ctgctgTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCa                                            >  2:4442466/1‑93 (MQ=255)

                                              tgctgTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCaa                                           >  2:489336/1‑93 (MQ=255)

                                                ctgTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAAcc                                         <  2:4067715/93‑1 (MQ=255)

                                                ctgTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAAcc                                         <  1:2407158/93‑1 (MQ=255)

                                                 tgTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCg                                        >  2:3131629/1‑93 (MQ=255)

                                                 tgTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCg                                        >  2:2202173/1‑93 (MQ=255)

                                                  gTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGa                                       <  1:359416/93‑1 (MQ=255)

                                                    tAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGaaa                                     >  1:4552901/1‑93 (MQ=255)

                                                    tAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGaaa                                     <  1:3869715/93‑1 (MQ=255)

                                                     aGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAg                                    <  1:4618471/93‑1 (MQ=255)

                                                       cgcCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGgt                                  >  2:2731049/1‑93 (MQ=255)

                                                        gcCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGgtg                                 >  1:3555589/1‑93 (MQ=255)

                                                          cGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTc                               <  2:4408339/93‑1 (MQ=255)

                                                          cGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTc                               <  2:2036094/93‑1 (MQ=255)

                                                          cGTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTc                               <  1:2215468/93‑1 (MQ=255)

                                                           gTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCg                              <  2:1876609/93‑1 (MQ=255)

                                                           gTTTCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCg                              >  2:1469987/1‑93 (MQ=255)

                                                            tttCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGa                             >  1:1967717/1‑93 (MQ=255)

                                                            tttCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGa                             >  1:1851243/1‑93 (MQ=255)

                                                            tttCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGa                             >  1:3151579/1‑93 (MQ=255)

                                                             ttCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGAt                            >  2:2326132/1‑93 (MQ=255)

                                                             ttCTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGAt                            <  1:1248821/93‑1 (MQ=255)

                                                              tCTGAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATg                           >  2:1100133/1‑93 (MQ=255)

                                                               cTAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGc                          >  1:963575/1‑93 (MQ=255)

                                                                tAAAGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGcc                         >  1:1496942/1‑93 (MQ=255)

                                                                  aaGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATTCCGATAATAATCAACCGAAAGGTGTCGATGCCGt                       <  1:1417686/93‑1 (MQ=255)

                                                                  aaGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGt                       <  2:221670/93‑1 (MQ=255)

                                                                  aaGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGt                       >  2:3386952/1‑93 (MQ=255)

                                                                   aGACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGtt                      >  2:2980775/1‑93 (MQ=255)

                                                                    gACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTg                     <  2:1427671/93‑1 (MQ=255)

                                                                    gACGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTg                     <  2:331449/93‑1 (MQ=255)

                                                                     aCGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTTGATGCCGTTgc                    >  2:1387332/1‑93 (MQ=255)

                                                                     aCGCTTTCAGCAACAGCCAGGCATTAAAGGCCAACAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTgc                    <  1:1007396/93‑1 (MQ=255)

                                                                     aCGCGTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTgc                    <  2:3654440/93‑1 (MQ=255)

                                                                      cGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTgcg                   >  1:1034468/1‑93 (MQ=255)

                                                                      cGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTgcg                   >  1:3800053/1‑93 (MQ=255)

                                                                      cGCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTgcg                   >  2:2422196/1‑93 (MQ=255)

                                                                       gCTTTCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTgcgc                  >  1:2647677/1‑93 (MQ=255)

                                                                         tttCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCa                >  1:772844/1‑93 (MQ=255)

                                                                         tttCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCa                <  2:2025841/93‑1 (MQ=255)

                                                                           tCAGCAACAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAgg              <  2:590859/93‑1 (MQ=255)

                                                                                aaCAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGagc         <  1:3310407/93‑1 (MQ=255)

                                                                                 aCAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGagca        <  2:1844346/93‑1 (MQ=255)

                                                                                 aCAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGagca        <  1:2966623/93‑1 (MQ=255)

                                                                                  cAGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGagcag       <  1:4042748/93‑1 (MQ=255)

                                                                                   aGCCAGGTATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGagcagc      <  2:1492725/93‑1 (MQ=255)

                                                                                   aGCCAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGagcagc      >  2:4453391/1‑93 (MQ=255)

                                                                                      cAGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGAGCAGCCAg   >  2:4613280/1‑93 (MQ=255)

                                                                                       aGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGAGCAGCCAGa  <  1:4626211/93‑1 (MQ=255)

                                                                                       aGGCATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGAGCAGCCAGa  <  1:3226940/93‑1 (MQ=255)

TTTTTGCCCACGTCAGGCCGTTGAGCGATCCGGCATTCCACAAACCTGCTGTTAGCGCCGTTTCTAAAGACGCTTTCAGCAACAGCCAGGTATTAAAGGCCACCAGCATGGCGCGAACGCCGATACCGATAATAATCAACCGAAAGGTGTCGATGCCGTTGCGCCAGGCGAGCAGCCAGA  >  NC_000913/619835‑620014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`