BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	648,378	T→C	E139E (GAA→GAG)	citF ←	citrate lyase alpha chain

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	648,378	0	T	C	100.0%	422.0 / NA	135	E139E (GAA→GAG)	citF	citrate lyase alpha chain
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (69/66); total (69/66)

Only 100 of 143 total aligned reads displayed.

GGACGGGACGCCGAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGTTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCGAATGTG  >  NC_000913/648288‑648467

ggacgggacgCCGAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTc                                                                                         <  1:664904/93‑1 (MQ=255)

     ggacgCCGAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCca                                                                                    >  2:2493158/1‑93 (MQ=255)

     ggacgCCGAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCca                                                                                    <  2:1122542/93‑1 (MQ=255)

        cgCCGAGGAAAGCCACGTCGATATTCAGTCCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCcagca                                                                                 <  1:1782110/93‑1 (MQ=255)

         gCCGAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCcagcag                                                                                >  1:504023/1‑93 (MQ=255)

          ccGAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGa                                                                               <  1:1866660/93‑1 (MQ=255)

            gAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGAcc                                                                             >  2:4551000/1‑93 (MQ=255)

            gAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGAcc                                                                             <  1:1772920/93‑1 (MQ=255)

             aGGAAAGCCACGTCGATATTGAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCa                                                                            >  2:4034091/1‑93 (MQ=255)

             aGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCa                                                                            >  1:222701/1‑93 (MQ=255)

             aGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCa                                                                            >  2:1396315/1‑93 (MQ=255)

              ggAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCAc                                                                           <  2:1405265/93‑1 (MQ=255)

               gAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACg                                                                          >  1:4550332/1‑93 (MQ=255)

                aaaGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACgg                                                                         >  2:121076/1‑93 (MQ=255)

                aaaGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACgg                                                                         >  2:2156388/1‑93 (MQ=255)

                  aGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGga                                                                       >  1:3787723/1‑93 (MQ=255)

                      ccGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGAtc                                                                   <  1:3582871/92‑1 (MQ=255)

                      aCGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGCGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGAtc                                                                   >  2:2762797/1‑93 (MQ=255)

                        gTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGAtctc                                                                 >  1:545891/1‑93 (MQ=255)

                        gTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGAtctc                                                                 >  2:1123956/1‑93 (MQ=255)

                        gTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGAtctc                                                                 <  2:199055/93‑1 (MQ=255)

                        gTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGAtctc                                                                 <  2:4252380/93‑1 (MQ=255)

                        gTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGAtctc                                                                 >  2:1478944/1‑93 (MQ=255)

                         tCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGCTCTGCACCGGCTCTGCCAGCAGACCACGGGAGATctct                                                                >  1:4372828/1‑93 (MQ=255)

                         tCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATctct                                                                <  1:3380970/93‑1 (MQ=255)

                         tCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATctct                                                                >  2:3216049/1‑93 (MQ=255)

                          cGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCtt                                                               <  2:2654641/93‑1 (MQ=255)

                           gATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTc                                                              <  1:406014/93‑1 (MQ=255)

                            atatTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTcc                                                             <  1:2909012/93‑1 (MQ=255)

                            atatTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTcc                                                             <  2:2132282/93‑1 (MQ=255)

                              atTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGc                                                           <  1:1291572/93‑1 (MQ=255)

                                tCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCa                                                         >  2:3601617/1‑93 (MQ=255)

                                  aGTTCGCCGCTCTGTACCAGATGCACCCGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGt                                                       <  1:431758/93‑1 (MQ=255)

                                  aGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGt                                                       >  1:3512916/1‑93 (MQ=255)

                                   gtccgccgcTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTg                                                      <  2:2652007/90‑1 (MQ=255)

                                   ctccgccccTCTGAACAAGACGCACGCGCCGGCCGTGAGAGTGGAACTGCCCCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTg                                                      <  2:3297607/90‑1 (MQ=255)

                                      cgccgcTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGAc                                                   >  1:293023/1‑93 (MQ=255)

                                       gccgcTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGAcc                                                  >  2:2609649/1‑93 (MQ=255)

                                       gccgcTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGAcc                                                  >  2:3134214/1‑93 (MQ=255)

                                       gccgcTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGAcc                                                  <  2:2571580/93‑1 (MQ=255)

                                         cgcTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCAc                                                <  1:2787851/93‑1 (MQ=255)

                                         cactctGTACCAGATGCACACGCCCGCCGTGAGAGTGGATCTGCGCCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCAc                                                <  2:3632223/91‑1 (MQ=255)

                                          gcTCTGTACCAGATGCACACGAGCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACg                                               >  2:4437089/1‑93 (MQ=255)

                                            tctGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCa                                             >  1:944001/1‑93 (MQ=255)

                                            tctGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCa                                             <  1:3888884/93‑1 (MQ=255)

                                             ctGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAg                                            <  2:918662/93‑1 (MQ=255)

                                               gactcAGATGCACGCGTCCGCCGTTAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGc                                          <  1:697418/89‑1 (MQ=255)

                                               gTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGc                                          <  2:1451178/93‑1 (MQ=255)

                                               gTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGc                                          <  2:2009494/93‑1 (MQ=255)

                                               gTACCAGATGCACACGACCGCCGCGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGACCTCTTCCGCCAGTGGACCGCGCAGGc                                          >  1:2818559/1‑93 (MQ=255)

                                                tACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGcc                                         <  2:2804489/93‑1 (MQ=255)

                                                tACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGcc                                         <  1:1608415/93‑1 (MQ=255)

                                                  ccAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCgg                                       >  1:2985693/1‑93 (MQ=255)

                                                  ccAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCgg                                       >  1:4451370/1‑93 (MQ=255)

                                                   cAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGa                                      <  1:1063097/93‑1 (MQ=255)

                                                   cAGAGGCACACGACCGCCGTGAGAGTGGATCGGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGa                                      <  1:2029745/93‑1 (MQ=255)

                                                    aGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAg                                     <  1:180835/93‑1 (MQ=255)

                                                    aGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAg                                     <  1:1657218/93‑1 (MQ=255)

                                                     gATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAgg                                    >  1:3164058/1‑93 (MQ=255)

                                                     gATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAgg                                    >  2:1621024/1‑93 (MQ=255)

                                                     gATGCACACGACCGCCGCGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGGTCTCTTCCGCCAGTGGACCACGCAGGCCGGAgg                                    >  2:2480737/1‑93 (MQ=255)

                                                       tGCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGta                                  <  1:2485317/93‑1 (MQ=255)

                                                        gCACACGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGtat                                 >  2:3927899/1‑93 (MQ=255)

                                                         cacaCGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGtata                                <  1:1024740/93‑1 (MQ=255)

                                                          acacGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATaa                               >  2:1734182/1‑93 (MQ=255)

                                                          acacGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATaa                               >  2:4338381/1‑93 (MQ=255)

                                                             cgcccgccgTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATg                            <  1:1034529/90‑1 (MQ=255)

                                                             cGACCGCCGTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGAATAAATg                            >  2:427319/1‑93 (MQ=255)

                                                                ccgccgTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCgg                         >  2:2505303/1‑93 (MQ=255)

                                                                ccgccgTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCgg                         <  2:44225/93‑1 (MQ=255)

                                                                  gccgTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACCCAGGCCGGAGGTATAAATGCggga                       >  2:1705028/1‑92 (MQ=255)

                                                                   ccgTGAGAGTGGATCTGCACCGGCTGTGCCAGCAGACCACGGGAGATCTCTTCAGCCAGTGGA‑CACGGACGGCCGAGGGATTAATGCggggta                     >  2:1895386/1‑90 (MQ=255)

                                                                     gTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAAc                    <  1:1951382/93‑1 (MQ=255)

                                                                     gTGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAAc                    >  2:3105538/1‑93 (MQ=255)

                                                                      tGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAAcc                   <  1:4127040/93‑1 (MQ=255)

                                                                      tGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAAcc                   >  1:3650648/1‑93 (MQ=255)

                                                                      tGAGAGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAAcc                   <  2:2307807/93‑1 (MQ=255)

                                                                       gagaGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCa                  <  2:2992319/93‑1 (MQ=255)

                                                                       gagaGTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCa                  <  2:3514292/93‑1 (MQ=255)

                                                                         gagTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACg                >  2:4518661/1‑93 (MQ=255)

                                                                           gTGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGcc              >  1:2045825/1‑93 (MQ=255)

                                                                            tgcaTCTCCTCCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGccc             <  2:101038/90‑1 (MQ=255)

                                                                            tGGATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGccc             <  1:1895530/93‑1 (MQ=255)

                                                                             ggATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCt            <  1:1241164/93‑1 (MQ=255)

                                                                              gATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTg           >  1:4505980/1‑93 (MQ=255)

                                                                              gATCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTg           >  2:2603937/1‑93 (MQ=255)

                                                                               aTCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTgg          <  2:3621060/93‑1 (MQ=255)

                                                                                tCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGc         >  2:1225140/1‑93 (MQ=255)

                                                                                tCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGc         <  2:1267305/93‑1 (MQ=255)

                                                                                tCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGc         <  1:2651150/93‑1 (MQ=255)

                                                                                tCTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGc         >  1:228741/1‑93 (MQ=255)

                                                                                tCTGCACCGGCTCTGCCAACAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGc         <  2:959170/93‑1 (MQ=255)

                                                                                 cTGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCg        <  2:562160/93‑1 (MQ=255)

                                                                                 cTGCACCGGCTCAGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGGATAAATGCGGGTAACCACGCCCTGGCg        >  2:3188281/1‑93 (MQ=255)

                                                                                  tGCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGAATAAATGCGGGTAACCACGCCCTGGCGa       >  1:2200665/1‑93 (MQ=255)

                                                                                   gCACCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCGaa      <  1:976000/93‑1 (MQ=255)

                                                                                    gaCCGGCTCTGCCAGCAGACCACGGGAGATCTGTACCGCCAGTGGACGAGGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCGAAt     <  2:1871754/92‑1 (MQ=255)

                                                                                     aCCGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCGAAtg    >  2:622262/1‑93 (MQ=255)

                                                                                      ccGGCTCTGCCAGCAGACCACGGGAGACCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCGAAtgt   <  2:2476757/93‑1 (MQ=255)

                                                                                       cGGCTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCGAAtgtg  >  1:3600797/1‑93 (MQ=255)

GGACGGGACGCCGAGGAAAGCCACGTCGATATTCAGTTCGCCGCTCTGTACCAGATGCACACGACCGCCGTGAGAGTGGATCTGCACCGGTTCTGCCAGCAGACCACGGGAGATCTCTTCCGCCAGTGGACCACGCAGGCCGGAGGTATAAATGCGGGTAACCACGCCCTGGCGAATGTG  >  NC_000913/648288‑648467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`