BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	652,748	A→G	T431A (ACC→GCC)	citA →	putative sensor‑type protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	652,748	0	A	G	100.0%	474.0 / NA	150	T431A (ACC→GCC)	citA	putative sensor‑type protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (73/77); total (73/77)

Only 100 of 153 total aligned reads displayed.

GTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCACCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAATTA  >  NC_000913/652659‑652837

gTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCg                                                                                        >  1:3789322/1‑93 (MQ=255)

gTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGGCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCg                                                                                        <  1:3492633/93‑1 (MQ=255)

  aaaGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAg                                                                                      <  1:3789134/93‑1 (MQ=255)

  aaaGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAg                                                                                      <  2:1744788/93‑1 (MQ=255)

   aaGTGCAGCGCGCCCGTGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGt                                                                                     <  1:4428251/93‑1 (MQ=255)

   aaGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGt                                                                                     <  1:1099949/93‑1 (MQ=255)

   aaGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGt                                                                                     <  2:3451297/93‑1 (MQ=255)

       gCAGCTCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGc                                                                                 <  2:377059/93‑1 (MQ=255)

       gCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGc                                                                                 <  2:2913514/93‑1 (MQ=255)

           cgcgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGcc                                                                             <  2:1750489/93‑1 (MQ=255)

            gcgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCa                                                                            <  1:4619613/93‑1 (MQ=255)

            gcgcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCa                                                                            <  1:4044199/93‑1 (MQ=255)

              gcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCAtt                                                                          >  2:3510821/1‑93 (MQ=255)

              gcCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCAtt                                                                          >  1:2677897/1‑93 (MQ=255)

               cccGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATtg                                                                         <  1:1476642/93‑1 (MQ=255)

                ccGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATtgt                                                                        <  1:1819204/93‑1 (MQ=255)

                ccGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATtgt                                                                        <  1:1053661/93‑1 (MQ=255)

                 cGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATtgtg                                                                       <  1:751640/93‑1 (MQ=255)

                  gggAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTgg                                                                      <  2:1099869/93‑1 (MQ=255)

                  gggAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTgg                                                                      <  2:2531734/93‑1 (MQ=255)

                  gggAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTgg                                                                      <  1:2825994/93‑1 (MQ=255)

                  gggAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTgg                                                                      >  2:1664506/1‑93 (MQ=255)

                  gggAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGAAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTgg                                                                      <  2:690560/93‑1 (MQ=255)

                    gAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGc                                                                    >  2:2008300/1‑93 (MQ=255)

                    gAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGc                                                                    >  2:1275580/1‑93 (MQ=255)

                     aaCTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCa                                                                   >  1:2780178/1‑93 (MQ=255)

                       cTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAAt                                                                 >  1:1753342/1‑93 (MQ=255)

                           ggCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTAc                                                             >  2:646899/1‑93 (MQ=255)

                            gCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACt                                                            <  2:451740/93‑1 (MQ=255)

                             cTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACtt                                                           >  2:4207928/1‑93 (MQ=255)

                             cTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACtt                                                           <  2:2393076/93‑1 (MQ=255)

                               aaaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGa                                                         <  1:4299210/93‑1 (MQ=255)

                               aaaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGa                                                         <  2:3736355/93‑1 (MQ=255)

                               aaaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGa                                                         <  1:2590721/93‑1 (MQ=255)

                               aaaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGa                                                         >  1:219036/1‑93 (MQ=255)

                               aaaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGa                                                         <  1:249872/93‑1 (MQ=255)

                                aaaaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGAt                                                        >  2:4191037/1‑93 (MQ=255)

                                  aaTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATaa                                                      >  1:2373644/1‑93 (MQ=255)

                                   aTGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAAc                                                     <  1:1548863/93‑1 (MQ=255)

                                    tGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACg                                                    >  1:227590/1‑93 (MQ=255)

                                    tGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACg                                                    >  1:2777466/1‑93 (MQ=255)

                                    tGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACg                                                    >  2:813694/1‑93 (MQ=255)

                                     gATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGc                                                   >  2:4030743/1‑93 (MQ=255)

                                      aTCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGcc                                                  <  1:2485822/93‑1 (MQ=255)

                                      aTCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGcc                                                  >  2:463294/1‑93 (MQ=255)

                                      aTCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGcc                                                  <  1:4420972/93‑1 (MQ=255)

                                       tCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCt                                                 <  1:3635456/93‑1 (MQ=255)

                                         aTTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTc                                               <  2:1637651/93‑1 (MQ=255)

                                         aTTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTc                                               >  2:2562026/1‑93 (MQ=255)

                                             tCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAag                                           <  1:3905648/93‑1 (MQ=255)

                                              ccccGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagc                                          <  2:3179810/93‑1 (MQ=255)

                                              ccccGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagc                                          >  1:3263476/1‑93 (MQ=255)

                                              ccccGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTCCGAagc                                          >  2:3048532/1‑93 (MQ=255)

                                               cccGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagcc                                         <  2:4644836/93‑1 (MQ=255)

                                                ccGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagcca                                        >  1:1945668/1‑93 (MQ=255)

                                                ccGCTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagcca                                        <  1:215709/93‑1 (MQ=255)

                                                 cGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccag                                       >  1:261396/1‑93 (MQ=255)

                                                 cGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccag                                       <  1:1173446/93‑1 (MQ=255)

                                                  ggTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAagccagc                                      >  2:3336742/1‑93 (MQ=255)

                                                    tAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCt                                    <  2:3963247/93‑1 (MQ=255)

                                                    tAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCt                                    >  2:2618612/1‑93 (MQ=255)

                                                      gCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGc                                  >  2:4445042/1‑93 (MQ=255)

                                                      gCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGc                                  >  2:1931414/1‑93 (MQ=255)

                                                      gCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGc                                  >  1:2336803/1‑93 (MQ=255)

                                                        cAGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGt                                >  2:2083905/1‑93 (MQ=255)

                                                         aGCTTTCGTAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTa                               >  2:4578310/1‑93 (MQ=255)

                                                         aGCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTa                               >  1:2185037/1‑93 (MQ=255)

                                                          gCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAg                              >  2:1861362/1‑93 (MQ=255)

                                                          gCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAg                              <  1:1280816/93‑1 (MQ=255)

                                                          gCTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAg                              >  1:3505768/1‑93 (MQ=255)

                                                           cTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGc                             <  1:3156242/93‑1 (MQ=255)

                                                           cTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGc                             <  2:2414790/93‑1 (MQ=255)

                                                           cTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGc                             >  2:2546017/1‑93 (MQ=255)

                                                           cTTTCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGc                             >  2:1478146/1‑93 (MQ=255)

                                                             ttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGa                           >  1:1848473/1‑93 (MQ=255)

                                                             ttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGa                           <  1:655124/93‑1 (MQ=255)

                                                             ttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGa                           <  2:3226344/93‑1 (MQ=255)

                                                             ttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGa                           >  1:925037/1‑93 (MQ=255)

                                                             ttCGCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACCTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGa                           >  1:451816/1‑93 (MQ=255)

                                                                gCAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGGAGCGATGa                        <  2:4556336/93‑1 (MQ=255)

                                                                 cAACTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGaa                       >  1:698873/1‑93 (MQ=255)

                                                                  aaCTGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAg                      >  1:4291004/1‑93 (MQ=255)

                                                                     tGCCGCCAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGaa                   <  1:2399145/93‑1 (MQ=255)

                                                                      gccgccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGaaa                  <  2:1061834/93‑1 (MQ=255)

                                                                         gccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACaa               <  2:1226545/93‑1 (MQ=255)

                                                                          ccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAg              <  1:3866637/93‑1 (MQ=255)

                                                                          ccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAg              >  1:1731779/1‑93 (MQ=255)

                                                                          ccAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAg              >  2:2043312/1‑93 (MQ=255)

                                                                           cAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGa             >  2:1973844/1‑93 (MQ=255)

                                                                           cAGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGa             >  1:283246/1‑93 (MQ=255)

                                                                            agtaCTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGAt            <  2:1855046/90‑1 (MQ=255)

                                                                            aGGACTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGAt            <  1:946426/93‑1 (MQ=255)

                                                                               aCTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGt         <  1:432903/93‑1 (MQ=255)

                                                                                cTGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGtt        <  1:4093797/93‑1 (MQ=255)

                                                                                 tGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTg       <  2:272827/93‑1 (MQ=255)

                                                                                 tGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTg       <  1:4196917/93‑1 (MQ=255)

                                                                                 tGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTg       >  1:2748080/1‑93 (MQ=255)

                                                                                 tGGATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTg       <  2:1466768/93‑1 (MQ=255)

                                                                                  ggATAGCGCCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGa      >  1:2446314/1‑93 (MQ=255)

                                                                                     tAGCGCCGATTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAatt   <  2:279189/93‑1 (MQ=255)

GTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCACCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAATTA  >  NC_000913/652659‑652837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`