BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	658,840	A→G	R200R (CGT→CGC)	lipA ←	lipoate synthesis

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	658,840	0	A	G	100.0%	497.1 / NA	155	R200R (CGT→CGC)	lipA	lipoate synthesis
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (80/75); total (80/75)

Only 100 of 167 total aligned reads displayed.

GGTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATACGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAATC  >  NC_000913/658750‑658929

ggTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGcg                                                                                         <  2:2396958/93‑1 (MQ=255)

 gTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATgcgc                                                                                        >  2:495651/1‑93 (MQ=255)

 gTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATgcgc                                                                                        >  2:4186838/1‑93 (MQ=255)

 gTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATgcgc                                                                                        <  2:188373/93‑1 (MQ=255)

 gTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATgcgc                                                                                        <  2:3556112/93‑1 (MQ=255)

  gcGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGcgcg                                                                                       <  1:1592779/92‑1 (MQ=255)

   cGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCgg                                                                                      <  1:3372680/93‑1 (MQ=255)

     ggATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTa                                                                                    <  1:2107279/93‑1 (MQ=255)

        tttCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGt                                                                                 >  1:3141938/1‑93 (MQ=255)

         ttCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGtt                                                                                >  1:2906289/1‑93 (MQ=255)

          tCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGttt                                                                               <  2:4001987/93‑1 (MQ=255)

              gATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCGGTACCTGACGGTAAATGCGCGGTACGTTTTCCa                                                                           <  1:2968651/93‑1 (MQ=255)

              gATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCa                                                                           <  2:3730787/93‑1 (MQ=255)

              gATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCa                                                                           >  1:522652/1‑93 (MQ=255)

               aTGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAg                                                                          <  1:3587/93‑1 (MQ=255)

               aTGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAg                                                                          <  2:2315486/93‑1 (MQ=255)

               aTGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAg                                                                          >  1:1314021/1‑93 (MQ=255)

                tGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAgg                                                                         >  1:3813515/1‑93 (MQ=255)

                tGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAgg                                                                         >  2:1504434/1‑93 (MQ=255)

                tGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAgg                                                                         >  1:1726087/1‑93 (MQ=255)

                 gcgcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGt                                                                        <  2:2773848/93‑1 (MQ=255)

                 gcgcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGt                                                                        <  1:3465655/93‑1 (MQ=255)

                   gcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTa                                                                      >  2:1555723/1‑93 (MQ=255)

                   gcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTa                                                                      >  2:3339124/1‑93 (MQ=255)

                   gcTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTa                                                                      <  2:1010962/93‑1 (MQ=255)

                    cttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTAt                                                                     <  1:454374/93‑1 (MQ=255)

                    cttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTAt                                                                     >  1:235117/1‑93 (MQ=255)

                    cttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTAt                                                                     >  2:265878/1‑93 (MQ=255)

                     ttcttTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATg                                                                    <  2:135349/93‑1 (MQ=255)

                       cttTAAAGCGTTCCAGCAGCTTCAGCCACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGt                                                                  <  1:1922694/93‑1 (MQ=255)

                        tttAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGtt                                                                 >  1:1830196/1‑93 (MQ=255)

                           aaaGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGac                                                              >  2:1633041/1‑92 (MQ=255)

                            aaGCGCTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAac                                                             >  2:2124455/1‑93 (MQ=255)

                             aGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAaca                                                            >  1:1399426/1‑93 (MQ=255)

                              gCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAacac                                                           >  1:417705/1‑93 (MQ=255)

                                gTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACAt                                                         >  1:2588141/1‑93 (MQ=255)

                                 ttCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACAtt                                                        >  1:3867922/1‑92 (MQ=255)

                                 ttCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATc                                                        <  2:1430784/93‑1 (MQ=255)

                                 ttCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATc                                                        <  1:1778838/93‑1 (MQ=255)

                                  tCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCt                                                       >  1:1130800/1‑93 (MQ=255)

                                   ccAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtg                                                      <  2:752008/93‑1 (MQ=255)

                                   ccAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtg                                                      <  1:2620533/93‑1 (MQ=255)

                                   ccAGCAGCTTCAGCGACCAGTTGCAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtg                                                      >  2:2616446/1‑93 (MQ=255)

                                    cagcagCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtgg                                                     <  2:4267696/93‑1 (MQ=255)

                                    cagcagCTGCAGCGACCAGATGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGGTATGGTTGAACACATCtgg                                                     >  2:4555775/1‑93 (MQ=255)

                                     agcagcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtggt                                                    <  1:4141067/93‑1 (MQ=255)

                                       cagcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCtggtgg                                                  <  2:3647870/93‑1 (MQ=255)

                                        agcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGc                                                 <  2:3731211/93‑1 (MQ=255)

                                        agcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGc                                                 >  1:2098072/1‑93 (MQ=255)

                                         gcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCg                                                >  1:4355735/1‑93 (MQ=255)

                                         gcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCg                                                >  1:4056780/1‑93 (MQ=255)

                                         gcTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCg                                                >  1:3194242/1‑93 (MQ=255)

                                          cTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGt                                               <  1:601936/93‑1 (MQ=255)

                                          cTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGt                                               >  1:2504644/1‑93 (MQ=255)

                                           ttCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGtt                                              <  1:3261436/93‑1 (MQ=255)

                                             cAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGc                                            <  2:3503997/93‑1 (MQ=255)

                                              aGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCa                                           >  2:29461/1‑93 (MQ=255)

                                              aGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCa                                           >  2:2193226/1‑93 (MQ=255)

                                              aGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCa                                           <  2:3118170/93‑1 (MQ=255)

                                                cGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGt                                         <  2:357189/93‑1 (MQ=255)

                                                agACCAGTTGTATTCTGCTCCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGt                                         <  1:909529/92‑1 (MQ=255)

                                                  aCCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCa                                       >  2:4124100/1‑93 (MQ=255)

                                                   ccAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAg                                      >  2:1153468/1‑93 (MQ=255)

                                                    cAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGa                                     >  1:86364/1‑93 (MQ=255)

                                                    cAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGa                                     >  2:388567/1‑93 (MQ=255)

                                                      gTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAat                                   >  1:3654829/1‑93 (MQ=255)

                                                       ttGTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAata                                  >  1:704695/1‑93 (MQ=255)

                                                        tGTAGTCTGCACCAGGCCGTCCCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAatat                                 <  2:2724611/93‑1 (MQ=255)

                                                         gTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATc                                <  1:3450389/93‑1 (MQ=255)

                                                         gTAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATc                                <  1:4636463/93‑1 (MQ=255)

                                                          tAATCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATcc                               <  1:1245953/93‑1 (MQ=255)

                                                            aTCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCag                             >  1:2585977/1‑93 (MQ=255)

                                                             tCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCaga                            >  2:4612627/1‑93 (MQ=255)

                                                             tCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCaga                            <  2:4250719/93‑1 (MQ=255)

                                                             tCTGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCaga                            <  1:1833463/93‑1 (MQ=255)

                                                               tGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGc                          >  1:4631047/1‑93 (MQ=255)

                                                               tGCACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGc                          <  1:3947071/93‑1 (MQ=255)

                                                                 cACCAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCAc                        <  2:4392172/93‑1 (MQ=255)

                                                                   ccAGGCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGa                      <  1:1981847/93‑1 (MQ=255)

                                                                      ggCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATcc                   >  2:3072657/1‑93 (MQ=255)

                                                                      ggCCGTACCTGACGGTAAATGAGCGGTACGTTTTCCAGGTTATGGTTGAAAACATCTGGTGGAGTTACAGTCAGAATATACAGAGCACGAtgc                   >  1:1674581/1‑91 (MQ=255)

                                                                       gCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCa                  <  1:4504700/93‑1 (MQ=255)

                                                                       gCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCa                  <  1:1495173/93‑1 (MQ=255)

                                                                       gCCGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCa                  >  1:1328886/1‑93 (MQ=255)

                                                                         cGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATa                <  2:1294010/93‑1 (MQ=255)

                                                                         cGTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATa                <  2:1943717/93‑1 (MQ=255)

                                                                          gTACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATAc               >  1:2379590/1‑93 (MQ=255)

                                                                           tACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACg              >  2:3421442/1‑93 (MQ=255)

                                                                           tACCTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACg              <  1:807512/93‑1 (MQ=255)

                                                                             ccTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAc            <  1:1119898/93‑1 (MQ=255)

                                                                              cTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAcc           >  1:1563504/1‑93 (MQ=255)

                                                                              cTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAcc           >  2:45322/1‑93 (MQ=255)

                                                                              cTGACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGAcc           >  2:1172078/1‑93 (MQ=255)

                                                                                gACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACcgc         >  2:2928318/1‑93 (MQ=255)

                                                                                gACGGTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACcgc         <  2:1358405/93‑1 (MQ=255)

                                                                                   ggTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGa      >  2:4196772/1‑93 (MQ=255)

                                                                                    gTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCATAATATCCAGAGCACGATCCATACGACCGCGGaa     <  1:3985111/93‑1 (MQ=255)

                                                                                    gTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGaa     >  2:4031780/1‑93 (MQ=255)

                                                                                    gTAAATGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGaa     <  1:3755404/93‑1 (MQ=255)

                                                                                      aaaTGCGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAAt   >  2:2632354/1‑93 (MQ=255)

GGTCGGGATTTCCGGATGCGCTTCTTTAAAGCGTTCCAGCAGCTTCAGCGACCAGTTGTAATCTGCACCAGGCCGTACCTGACGGTAAATACGCGGTACGTTTTCCAGGTTATGGTTGAACACATCTGGTGGCGTTGCAGTCAGAATATCCAGAGCACGATCCATACGACCGCGGAAATC  >  NC_000913/658750‑658929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`