BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	661,929	T→C	intergenic (‑64/+46)	ybeD ← / ← dacA	hypothetical protein/D‑alanyl‑D‑alanine carboxypeptidase fraction A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	661,929	0	T	C	100.0%	512.1 / NA	159	intergenic (‑64/+46)	ybeD/dacA	hypothetical protein/D‑alanyl‑D‑alanine carboxypeptidase fraction A
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/93); total (66/93)

Only 100 of 167 total aligned reads displayed.

AAGCAGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGATGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTAATCAATGA  >  NC_000913/661839‑662018

 aGCAGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCt                                                                                        <  2:1779972/93‑1 (MQ=255)

 aGCAGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCt                                                                                        <  1:3932948/93‑1 (MQ=255)

 aGCAGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGCTTTTTACTGACGCt                                                                                        >  2:4465933/1‑93 (MQ=255)

  gCAGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCtt                                                                                       >  2:2162510/1‑93 (MQ=255)

    aGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAg                                                                                     <  1:1418557/93‑1 (MQ=255)

    aGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAg                                                                                     >  1:4564979/1‑93 (MQ=255)

     gTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGt                                                                                    >  1:4169999/1‑93 (MQ=255)

     gTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGt                                                                                    >  1:4411064/1‑93 (MQ=255)

      ttCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGta                                                                                   <  1:2374500/93‑1 (MQ=255)

       tCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGtat                                                                                  <  1:3722549/93‑1 (MQ=255)

       tCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGtat                                                                                  <  1:1941676/93‑1 (MQ=255)

         gTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTGTTTACTGACGCTTAGTatat                                                                                >  2:2368923/1‑93 (MQ=255)

          ttAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATg                                                                               <  2:4321202/93‑1 (MQ=255)

           tAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATgg                                                                              <  1:1343611/93‑1 (MQ=255)

              gTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGa                                                                           <  2:1425402/93‑1 (MQ=255)

              gTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGa                                                                           >  2:1548230/1‑93 (MQ=255)

               tttGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGAc                                                                          <  1:3795417/93‑1 (MQ=255)

                  ggTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGa                                                                       <  1:3865254/93‑1 (MQ=255)

                   gTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGaa                                                                      >  1:2455740/1‑93 (MQ=255)

                   gTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGaa                                                                      >  1:570158/1‑93 (MQ=255)

                    ttttCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGaaa                                                                     >  2:3332295/1‑93 (MQ=255)

                    ttttCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGaaa                                                                     <  2:1598452/93‑1 (MQ=255)

                    ttttCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGaaa                                                                     <  2:248482/93‑1 (MQ=255)

                    ttttCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGaaa                                                                     >  2:747197/1‑93 (MQ=255)

                    ttttCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGaaa                                                                     >  1:1242898/1‑93 (MQ=255)

                     tttCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAAt                                                                    <  1:2761124/93‑1 (MQ=255)

                     tttCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAAt                                                                    <  2:4594920/93‑1 (MQ=255)

                     tttCATATCAGCTCCGGCGTAACGTAATTAAATAGCAACGCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAAt                                                                    <  2:2076691/93‑1 (MQ=255)

                       tCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTa                                                                  >  1:3105492/1‑93 (MQ=255)

                        cATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTac                                                                 <  2:1529257/93‑1 (MQ=255)

                        cATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTGTTTACTGACGCTTAGTATATGGGGACGGAAATTac                                                                 >  1:1839135/1‑93 (MQ=255)

                          tGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTacac                                                               >  1:3154948/1‑93 (MQ=255)

                          tGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTacac                                                               <  1:339405/93‑1 (MQ=255)

                            tCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACtt                                                             <  2:3033331/93‑1 (MQ=255)

                            tCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACtt                                                             >  2:279010/1‑93 (MQ=255)

                            tCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACtt                                                             <  2:1038879/93‑1 (MQ=255)

                            tCAGCTCCGGCGTAACGGAATTAAATAGCGACTCCCGCCAGAAGGCGGGAGTTTTTTACTTACGCTTAGTATATGGGGTCGGAAATTacacct                                                             >  2:2969014/1‑91 (MQ=255)

                               gCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATCTGGGGACGGAAATTACACTTTCa                                                          >  2:1122084/1‑93 (MQ=255)

                               gCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCa                                                          <  1:151262/93‑1 (MQ=255)

                               gCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGGTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCa                                                          >  2:2489941/1‑93 (MQ=255)

                                cTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCaa                                                         <  2:2300701/93‑1 (MQ=255)

                                cTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCaa                                                         <  2:3848001/93‑1 (MQ=255)

                                cTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCaa                                                         >  1:965550/1‑93 (MQ=255)

                                  ccGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAgt                                                       <  1:4264943/93‑1 (MQ=255)

                                  ccGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAgt                                                       <  2:58812/93‑1 (MQ=255)

                                     gCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGtt                                                    <  1:238530/93‑1 (MQ=255)

                                      ggtaacgtaaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAgtgtat                                                   <  2:1144345/92‑3 (MQ=255)

                                        taacgtaaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTat                                                 >  1:3697107/1‑92 (MQ=255)

                                         aacgtaaTTAAATAGCAACCCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAt                                                >  2:4565294/1‑93 (MQ=255)

                                          acgtaaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAtt                                               >  2:1002810/1‑93 (MQ=255)

                                          acgtaaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAtt                                               >  1:3153936/1‑93 (MQ=255)

                                          acgtaaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAtt                                               <  2:2316961/93‑1 (MQ=255)

                                            gtaaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAtttt                                             >  1:1571789/1‑93 (MQ=255)

                                            gtaaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAtttt                                             >  2:3373480/1‑93 (MQ=255)

                                            ctaaTTAAATAGCAACCCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAtttt                                             <  2:4292862/92‑1 (MQ=255)

                                             taaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAttttt                                            >  1:560149/1‑93 (MQ=255)

                                             taaTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAAttttt                                            <  2:394876/93‑1 (MQ=255)

                                               aTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTaa                                          >  2:3905368/1‑93 (MQ=255)

                                               aTTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTaa                                          <  2:2413366/93‑1 (MQ=255)

                                                ttAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTaac                                         <  2:3103504/93‑1 (MQ=255)

                                                    aTAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTaaccaaa                                     >  2:4672134/1‑93 (MQ=255)

                                                     tAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTaaccaaac                                    <  1:3235815/93‑1 (MQ=255)

                                                        caccTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAg                                 <  1:2996507/90‑1 (MQ=255)

                                                        cAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAg                                 <  2:1204972/93‑1 (MQ=255)

                                                        cAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAg                                 <  1:1718636/93‑1 (MQ=255)

                                                         aaCTCCCGGCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGt                                <  1:4503934/93‑1 (MQ=255)

                                                         aaCTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGt                                >  1:1090224/1‑93 (MQ=255)

                                                         aaCTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGt                                <  2:1313503/93‑1 (MQ=255)

                                                         aaCTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGt                                <  1:749913/93‑1 (MQ=255)

                                                          aCTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTg                               >  1:3031539/1‑93 (MQ=255)

                                                          aCTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTg                               >  2:2901117/1‑93 (MQ=255)

                                                           cTCCCGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGa                              <  1:4580428/93‑1 (MQ=255)

                                                             cccGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATg                            <  2:2583941/93‑1 (MQ=255)

                                                               cGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGa                          <  1:3319081/93‑1 (MQ=255)

                                                               cGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGa                          <  2:4131669/93‑1 (MQ=255)

                                                               cGCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGa                          >  1:3472279/1‑93 (MQ=255)

                                                                gCCAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGaa                         >  2:2621646/1‑93 (MQ=255)

                                                                 ccAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAAc                        >  2:3601001/1‑93 (MQ=255)

                                                                  cAGAAGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACa                       <  2:535808/93‑1 (MQ=255)

                                                                      aGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaa                   <  1:685892/93‑1 (MQ=255)

                                                                      aGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaa                   <  2:3760890/93‑1 (MQ=255)

                                                                      aGGCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaa                   <  2:1435466/93‑1 (MQ=255)

                                                                        gCGGGAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaatt                 >  2:2716852/1‑93 (MQ=255)

                                                                          gggAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaattta               >  2:2684662/1‑93 (MQ=255)

                                                                           ggAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACCttaatttaa              >  2:902401/1‑93 (MQ=255)

                                                                           ggAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaatttaa              >  2:4490671/1‑93 (MQ=255)

                                                                           ggAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaatttaa              <  1:2618695/93‑1 (MQ=255)

                                                                           ggAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaatttaa              >  2:3486314/1‑93 (MQ=255)

                                                                            gAGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACAttaatttaat             <  2:3295402/93‑1 (MQ=255)

                                                                             aGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATg            <  1:78991/93‑1 (MQ=255)

                                                                             aGTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATg            <  1:1061094/93‑1 (MQ=255)

                                                                              gTTTTTTACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGt           <  1:3670645/93‑1 (MQ=255)

                                                                               ttttttACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTa          <  1:3460994/93‑1 (MQ=255)

                                                                               ttttttACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTa          <  2:3398746/93‑1 (MQ=255)

                                                                               ttttttACTGACGCTTAGTATATGGGAACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTa          <  1:2280832/93‑1 (MQ=255)

                                                                                 ttttACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTAAt        >  1:4247424/1‑93 (MQ=255)

                                                                                  tttACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCATGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTAATc       >  1:3297382/1‑93 (MQ=255)

                                                                                   ttACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTAATCa      <  2:2794164/93‑1 (MQ=255)

                                                                                    tACTGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTAATCaa     <  1:2610221/93‑1 (MQ=255)

                                                                                       tGACGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTAATCAATGa  <  1:1352621/93‑1 (MQ=255)

AAGCAGTTCGTTAAGTTTGGTTTTCATGTCAGCTCCGGCGTAACGTAATTAAATAGCAACTCCCGCCAGAAGGCGGGAGTTTTTTACTGATGCTTAGTATATGGGGACGGAAATTACACTTTCAAGTGTTTAATTTTTAACCAAACCAGTGATGGAACATTAATTTAATGTAATCAATGA  >  NC_000913/661839‑662018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`