BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	671,943	T→C	A688A (GCA→GCG)	leuS ←	leucine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	671,943	0	T	C	100.0%	459.5 / NA	144	A688A (GCA→GCG)	leuS	leucine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (78/66); total (78/66)

Only 100 of 152 total aligned reads displayed.

ACGGCCGATATCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGTGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTCCT  >  NC_000913/671853‑672031

acgGCCGATATCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAgcgc                                                                                        >  2:2415495/1‑93 (MQ=255)

acgGCCGATATCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAgcgc                                                                                        <  2:3191551/93‑1 (MQ=255)

   gCCGATATCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGcgccgc                                                                                     >  1:1996682/1‑93 (MQ=255)

   gCCGATATCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGcgccgc                                                                                     <  2:1992567/93‑1 (MQ=255)

      gATATCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAAc                                                                                  >  2:4571819/1‑93 (MQ=255)

        tatCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACAt                                                                                >  2:202046/1‑93 (MQ=255)

         atcatcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATc                                                                               >  1:2457598/1‑93 (MQ=255)

          tcatcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCACCGTTCAGCGCCGCAACATcc                                                                              <  2:4107760/93‑2 (MQ=255)

          tcatcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACGTCa                                                                              <  2:3396656/93‑1 (MQ=255)

          tcatcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCa                                                                              >  2:3314552/1‑93 (MQ=255)

          tcatcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCa                                                                              >  1:416070/1‑93 (MQ=255)

          tcatcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCa                                                                              >  1:1468292/1‑93 (MQ=255)

          tcatcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCa                                                                              <  1:3844579/93‑1 (MQ=255)

          tcagcGGTCAATTTAGCGAGCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCa                                                                              <  2:3460136/93‑1 (MQ=255)

            atcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCAcc                                                                            >  1:1824339/1‑93 (MQ=255)

             tcGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCt                                                                           >  2:2315971/1‑93 (MQ=255)

              cGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCtt                                                                          <  1:3718800/93‑1 (MQ=255)

               ggTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGGCAGCGCATCAACGTTCAGCGCCGCAACATCACCttt                                                                         >  1:1862932/1‑93 (MQ=255)

                gTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCtttt                                                                        >  2:4540544/1‑93 (MQ=255)

                  cACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGc                                                                      <  2:81921/93‑1 (MQ=255)

                  cACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGc                                                                      >  1:832011/1‑93 (MQ=255)

                   aCTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCt                                                                     <  2:595419/93‑1 (MQ=255)

                    cTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCtg                                                                    <  1:2119445/93‑1 (MQ=255)

                     tttAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCtgt                                                                   <  2:3771249/93‑1 (MQ=255)

                       tAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCtgtgt                                                                 <  2:1344936/93‑1 (MQ=255)

                        aGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCtgtgtg                                                                >  1:89208/1‑93 (MQ=255)

                         gCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGc                                                               <  2:746519/93‑1 (MQ=255)

                          cGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTCTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCt                                                              <  2:2435955/93‑1 (MQ=255)

                            aTCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCg                                                            >  1:4180493/1‑93 (MQ=255)

                               gTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCGCCTTTTGCTGTGTGCTCGTaa                                                         <  1:1390485/93‑1 (MQ=255)

                               gTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTaa                                                         >  1:3225168/1‑93 (MQ=255)

                                ttttATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTaaa                                                        <  2:4066350/93‑1 (MQ=255)

                                ttttATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTaaa                                                        >  2:1204077/1‑93 (MQ=255)

                                ttttATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTaaa                                                        >  1:2840143/1‑93 (MQ=255)

                                ttttATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTaaa                                                        <  2:2965397/93‑1 (MQ=255)

                                 tttATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAAc                                                       >  2:562095/1‑93 (MQ=255)

                                    aTGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAg                                                    <  1:3511112/93‑1 (MQ=255)

                                     tGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGt                                                   >  2:1790370/1‑93 (MQ=255)

                                     tGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGt                                                   >  2:2957161/1‑93 (MQ=255)

                                       cacaTCGCGACGCAGCGCTTTCTGATTTTCAGTTAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGttt                                                 <  1:4471297/93‑1 (MQ=255)

                                       cacaTCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGttt                                                 <  1:2155587/93‑1 (MQ=255)

                                       cacaTCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGttt                                                 >  1:1284023/1‑93 (MQ=255)

                                        acaTCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTc                                                >  1:1017062/1‑93 (MQ=255)

                                        acaTCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTc                                                <  1:2091838/93‑1 (MQ=255)

                                         caTCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTcc                                               >  1:547847/1‑93 (MQ=255)

                                          aTCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCa                                              >  2:4391291/1‑93 (MQ=255)

                                          aTCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCa                                              <  2:3727933/93‑1 (MQ=255)

                                             gcgACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCATTTTCCAGac                                           <  1:2032462/93‑1 (MQ=255)

                                              cgACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGaca                                          >  2:4424082/1‑93 (MQ=255)

                                               gACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGacac                                         >  1:2725872/1‑93 (MQ=255)

                                               gACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGacac                                         <  2:3384349/93‑1 (MQ=255)

                                               gACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGacac                                         <  1:4349150/93‑1 (MQ=255)

                                                 cGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGt                                       >  1:755936/1‑93 (MQ=255)

                                                  gCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGtt                                      <  1:333887/93‑1 (MQ=255)

                                                    aGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTc                                    >  1:657857/1‑93 (MQ=255)

                                                     gcgcTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCa                                   >  2:4086362/1‑93 (MQ=255)

                                                      cgcTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAg                                  <  1:612517/93‑1 (MQ=255)

                                                        cTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGa                                >  1:361231/1‑93 (MQ=255)

                                                         tttCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGaa                               <  1:1688821/93‑1 (MQ=255)

                                                         tttCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGaa                               >  1:3086910/1‑93 (MQ=255)

                                                         tttCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGaa                               >  2:3390289/1‑93 (MQ=255)

                                                         tttCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGaa                               <  1:3333502/93‑1 (MQ=255)

                                                          ttCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAg                              <  2:2200108/93‑1 (MQ=255)

                                                          ttCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAg                              <  2:1429396/93‑1 (MQ=255)

                                                          ttCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAg                              >  1:1788042/1‑93 (MQ=255)

                                                           tCTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGc                             <  2:2189622/93‑1 (MQ=255)

                                                            cTGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCg                            >  1:2197283/1‑93 (MQ=255)

                                                             tGATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCgg                           <  1:346912/93‑1 (MQ=255)

                                                              gATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGt                          >  2:2265052/1‑93 (MQ=255)

                                                              gATTTTCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGt                          <  2:4192909/93‑1 (MQ=255)

                                                                ttttCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTa                        >  1:1018924/1‑93 (MQ=255)

                                                                 tttCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAg                       <  2:1264494/93‑1 (MQ=255)

                                                                 tttCAGTCAGCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGGTAg                       >  2:2390174/1‑93 (MQ=255)

                                                                   tcagtcagCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAgac                     >  1:3961882/1‑91 (MQ=255)

                                                                      gtcagCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCt                  <  1:2993592/93‑1 (MQ=255)

                                                                       tcagCGCATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCtt                 >  1:2834743/1‑93 (MQ=255)

                                                                          gcgcATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCca              >  2:3817602/1‑93 (MQ=255)

                                                                           cgcATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCcac             <  2:2130447/93‑1 (MQ=255)

                                                                            gcATCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCcaca            >  1:4328795/1‑93 (MQ=255)

                                                                             cATCAACGTTCAGCGCCGCAACATCCCCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCacac           <  2:283080/93‑1 (MQ=255)

                                                                              aTCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACAcc          <  1:4011052/93‑1 (MQ=255)

                                                                              aTCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACAcc          <  1:2254919/93‑1 (MQ=255)

                                                                              aTCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGACCCTTCCACAcc          >  1:2780065/1‑93 (MQ=255)

                                                                               tCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTGGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGATAGCCCCTTCCACACCg         >  2:662805/1‑93 (MQ=255)

                                                                               tCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCg         >  2:891285/1‑93 (MQ=255)

                                                                               tCAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCg         >  1:2340176/1‑93 (MQ=255)

                                                                                cAACGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCgg        >  2:3223625/1‑93 (MQ=255)

                                                                                 aaCGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGa       >  2:4336746/1‑93 (MQ=255)

                                                                                 aaCGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGa       >  1:3601175/1‑93 (MQ=255)

                                                                                 aaCGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGa       >  2:2126094/1‑93 (MQ=255)

                                                                                 aaCGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGa       <  1:4487197/93‑1 (MQ=255)

                                                                                  aCGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGAt      >  2:4360410/1‑93 (MQ=255)

                                                                                  aCGTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGAt      >  2:3193538/1‑93 (MQ=255)

                                                                                    gTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTc    >  2:2473467/1‑93 (MQ=255)

                                                                                    gTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTc    <  2:2888091/93‑1 (MQ=255)

                                                                                    gTTCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTc    >  2:829919/1‑93 (MQ=255)

                                                                                     ttCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTcc   <  2:1956279/93‑1 (MQ=255)

                                                                                     ttCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTcc   <  1:1963399/93‑1 (MQ=255)

                                                                                      tCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTCCt  <  1:797115/93‑1 (MQ=255)

                                                                                      tCAGCGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTCCt  <  1:1635593/93‑1 (MQ=255)

ACGGCCGATATCATCGGTCACTTTAGCGATCGTTTTATGCACATCGCGACGCAGCGCTTTCTGATTTTCAGTCAGCGCATCAACGTTCAGTGCCGCAACATCACCTTTTGCTGTGTGCTCGTAAACCAGTTTCCAGACACGTTTCAGGAAGCGGTTAGCCCCTTCCACACCGGATTCCT  >  NC_000913/671853‑672031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`