BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	709,880	T→C	intergenic (‑11/+278)	fur ← / ← fldA	Fur/flavodoxin 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	709,880	0	T	C	100.0%	529.5 / NA	165	intergenic (‑11/+278)	fur/fldA	Fur/flavodoxin 1
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (84/81); total (84/81)

Only 100 of 169 total aligned reads displayed.

TGAAGAACTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCTAAA  >  NC_000913/709790‑709969

tGAAGAACTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGccc                                                                                         <  1:81188/93‑1 (MQ=255)

tGAAGAACTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGccc                                                                                         >  1:76191/1‑93 (MQ=255)

 gaagaaCTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCt                                                                                        >  2:2528778/1‑93 (MQ=255)

 gaagaaCTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCt                                                                                        >  2:1850805/1‑93 (MQ=255)

    gaaCTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGtt                                                                                     >  2:3023567/1‑93 (MQ=255)

      aCTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTAc                                                                                   <  1:3874464/93‑1 (MQ=255)

      aCTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTAc                                                                                   <  1:959455/93‑1 (MQ=255)

        ttCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTa                                                                                 <  1:3267013/93‑1 (MQ=255)

         tCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTaa                                                                                <  1:1715459/93‑1 (MQ=255)

          ccAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAg                                                                               >  1:237914/1‑93 (MQ=255)

           cAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTCACTAAGc                                                                              <  2:4607706/93‑1 (MQ=255)

              gATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGt                                                                           <  2:3352986/93‑1 (MQ=255)

               aTTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGtt                                                                          <  1:3020478/93‑1 (MQ=255)

                tttttAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTc                                                                         >  1:2050260/1‑93 (MQ=255)

                tttttAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTc                                                                         >  1:2283216/1‑93 (MQ=255)

                 ttttAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCa                                                                        <  2:1254997/93‑1 (MQ=255)

                 ttttAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGGATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCa                                                                        >  1:4206317/1‑93 (MQ=255)

                  tttAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCAc                                                                       >  2:1155470/1‑93 (MQ=255)

                   ttAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACt                                                                      >  2:2489609/1‑93 (MQ=255)

                   ttAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACt                                                                      <  1:2661040/93‑1 (MQ=255)

                      aaCGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCa                                                                   <  2:2851292/93‑1 (MQ=255)

                       aCGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCAt                                                                  <  2:3724134/93‑1 (MQ=255)

                       aCGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCAt                                                                  >  2:3117784/1‑93 (MQ=255)

                        cGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTTACTTCAtt                                                                 >  2:197441/1‑93 (MQ=255)

                        cGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCAtt                                                                 <  1:477747/93‑1 (MQ=255)

                           ggAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTaga                                                              >  1:3476760/1‑93 (MQ=255)

                             aaGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTagaag                                                            <  1:19901/93‑1 (MQ=255)

                              aGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTagaaga                                                           >  1:3447041/1‑93 (MQ=255)

                               gCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAgaagaa                                                          >  1:1832792/1‑93 (MQ=255)

                               gCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAgaagaa                                                          <  1:3292013/93‑1 (MQ=255)

                               gCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAgaagaa                                                          >  2:3410636/1‑93 (MQ=255)

                               gCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAgaagaa                                                          <  1:585097/93‑1 (MQ=255)

                                  ttACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTg                                                       >  1:848369/1‑93 (MQ=255)

                                  ttACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTg                                                       >  2:626901/1‑93 (MQ=255)

                                   tACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGa                                                      <  1:2907968/93‑1 (MQ=255)

                                    aCTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGAc                                                     <  1:410845/93‑1 (MQ=255)

                                        tCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGaa                                                 <  1:3435257/93‑1 (MQ=255)

                                         cAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAAt                                                <  1:3561626/93‑1 (MQ=255)

                                         cAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAAt                                                <  2:2211723/93‑1 (MQ=255)

                                          aGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAAtt                                               >  1:4078423/1‑93 (MQ=255)

                                              cAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGct                                           >  2:4393332/1‑93 (MQ=255)

                                               aGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGctc                                          >  1:1243894/1‑93 (MQ=255)

                                               aGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGctc                                          <  2:446768/93‑1 (MQ=255)

                                               aGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGAAAGAATTTGctt                                          >  2:652186/1‑92 (MQ=255)

                                                gCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGctct                                         >  2:2670946/1‑93 (MQ=255)

                                                 ctttctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCtt                                        <  1:844574/93‑1 (MQ=255)

                                                 ctttctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCtt                                        >  1:2785038/1‑93 (MQ=255)

                                                  tttctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTg                                       >  1:4084453/1‑93 (MQ=255)

                                                  tttctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTg                                       <  2:1700065/93‑1 (MQ=255)

                                                   ttctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTga                                      >  1:787249/1‑93 (MQ=255)

                                                   ttctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTga                                      <  1:371392/93‑1 (MQ=255)

                                                   ttctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTga                                      <  1:4358864/93‑1 (MQ=255)

                                                   ttctttAGGGCGGTAGTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCGCTTga                                      <  1:411731/93‑1 (MQ=255)

                                                    tctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTgag                                     <  2:1752211/93‑1 (MQ=255)

                                                     ctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTgaga                                    <  1:902091/93‑1 (MQ=255)

                                                     ctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTgaga                                    <  1:1053995/93‑1 (MQ=255)

                                                     ctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTgaga                                    <  1:3948408/93‑1 (MQ=255)

                                                     ctttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTgaga                                    >  2:3660771/1‑93 (MQ=255)

                                                      tttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCCCTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGAt                                   >  2:116068/1‑93 (MQ=255)

                                                      tttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTgagac                                   >  2:1642343/1‑92 (MQ=255)

                                                      tttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGAt                                   <  2:4290279/93‑1 (MQ=255)

                                                      tttAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGAt                                   <  2:870938/93‑1 (MQ=255)

                                                        tAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATaa                                 <  1:4394554/93‑1 (MQ=255)

                                                        tAGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATaa                                 <  1:4149444/93‑1 (MQ=255)

                                                         aGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAAt                                <  1:1578599/93‑1 (MQ=255)

                                                         aGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAAt                                <  1:2254711/93‑1 (MQ=255)

                                                         aGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAAt                                <  2:3089551/93‑1 (MQ=255)

                                                         aGGGCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAAt                                <  1:3081979/93‑1 (MQ=255)

                                                          gggCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATg                               >  1:1478447/1‑93 (MQ=255)

                                                          gggCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATg                               >  1:2968324/1‑93 (MQ=255)

                                                            gCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCg                             <  2:4302278/93‑1 (MQ=255)

                                                            gCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCg                             <  2:394983/93‑1 (MQ=255)

                                                            gCGGTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCg                             <  2:3895584/93‑1 (MQ=255)

                                                              ggTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTa                           >  1:4152436/1‑93 (MQ=255)

                                                              ggTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTa                           <  2:552655/93‑1 (MQ=255)

                                                               gTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTAt                          >  1:570826/1‑93 (MQ=255)

                                                               gTATTGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTAt                          >  1:1298978/1‑93 (MQ=255)

                                                                  ttGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCAt                       >  1:3587040/1‑93 (MQ=255)

                                                                  ttGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCAt                       <  1:2527542/93‑1 (MQ=255)

                                                                  ttGTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCAt                       >  2:2255262/1‑93 (MQ=255)

                                                                    gTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATta                     <  1:1946561/93‑1 (MQ=255)

                                                                    gTTATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATta                     <  1:2725880/93‑1 (MQ=255)

                                                                     ttATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATtat                    <  1:2446043/93‑1 (MQ=255)

                                                                      tATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATtata                   >  1:3047370/1‑93 (MQ=255)

                                                                      tATCAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATtata                   <  1:4401743/93‑1 (MQ=255)

                                                                         cAGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGaa                <  1:3331698/93‑1 (MQ=255)

                                                                          aGTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAAt               <  2:4507953/93‑1 (MQ=255)

                                                                           gTCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAAtt              >  2:708510/1‑93 (MQ=255)

                                                                            tCATGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTg             >  2:3096442/1‑93 (MQ=255)

                                                                               tGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCa          >  2:1864591/1‑93 (MQ=255)

                                                                               tGCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCa          >  2:4421471/1‑93 (MQ=255)

                                                                                gCGGAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCAc         <  2:784303/93‑1 (MQ=255)

                                                                                  ggAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGc       >  2:27720/1‑93 (MQ=255)

                                                                                   gAATCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGcc      <  1:1095149/93‑1 (MQ=255)

                                                                                    aaTCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCt     >  1:3129039/1‑93 (MQ=255)

                                                                                     aTCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCTa    >  1:2906245/1‑93 (MQ=255)

                                                                                      tCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCTaa   >  2:3762441/1‑93 (MQ=255)

                                                                                      tCTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCTaa   >  1:77511/1‑93 (MQ=255)

                                                                                       cTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCTaaa  <  2:2378097/93‑1 (MQ=255)

                                                                                       cTGCCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCTaaa  <  2:2202557/93‑1 (MQ=255)

TGAAGAACTTCCAGGATTTTTAAACGAGGAAGCGTTACTTTCAGGCCAGCTTTCTTTAGGGCGGTATTGTTATCAGTCATGCGGAATCTGTCCTGTTACTAAGCGGTTCACTTCATTAGAAGAAGTGACAGAATTTGCTCTTGAGATAATGCGTATCATTATAGAATTGCCACGCCTAAA  >  NC_000913/709790‑709969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`