BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	752,007	T→C	G4G (GGA→GGG)	ybgD ←	putative fimbrial‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	752,007	0	T	C	100.0%	366.2 / NA	116	G4G (GGA→GGG)	ybgD	putative fimbrial‑like protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (25/91); total (25/91)

Only 100 of 116 total aligned reads displayed.

TTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTT  >  NC_000913/751918‑752096

ttAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCt                                                                                        <  2:65991/93‑1 (MQ=255)

  aaaGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCttt                                                                                      <  1:408074/93‑1 (MQ=255)

   aaGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTa                                                                                     <  2:4643575/93‑1 (MQ=255)

    aGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTaa                                                                                    <  1:3227983/93‑1 (MQ=255)

     gTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTaaa                                                                                   <  2:619563/93‑1 (MQ=255)

     gTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTaaa                                                                                   <  2:3672452/93‑1 (MQ=255)

      tGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAc                                                                                  <  1:3979071/93‑1 (MQ=255)

      tGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAc                                                                                  <  2:2230218/93‑1 (MQ=255)

      tGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAc                                                                                  <  1:1554794/93‑1 (MQ=255)

      tGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAc                                                                                  <  1:2991532/93‑1 (MQ=255)

      tGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAAc                                                                                  <  1:2839506/93‑1 (MQ=255)

       gAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACa                                                                                 <  2:1040070/93‑1 (MQ=255)

        aaTTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACAt                                                                                <  2:884533/93‑1 (MQ=255)

        aaTTACGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACAt                                                                                <  2:2890876/93‑1 (MQ=255)

         aTTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATa                                                                               <  1:4548270/93‑1 (MQ=255)

          tttCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATaa                                                                              <  1:1449953/93‑1 (MQ=255)

          tttCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATaa                                                                              >  1:1931219/1‑93 (MQ=255)

          tttCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATaa                                                                              <  1:3061337/93‑1 (MQ=255)

           ttCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAAc                                                                             >  2:4262495/1‑93 (MQ=255)

           ttCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAAc                                                                             <  1:4674770/93‑1 (MQ=255)

            tCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACa                                                                            <  2:144618/93‑1 (MQ=255)

            tCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACa                                                                            <  2:2330005/93‑1 (MQ=255)

             cGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTATGCCCTTTAAACATAACag                                                                           <  2:4551613/93‑1 (MQ=255)

              gCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACaga                                                                          <  2:2614590/93‑1 (MQ=255)

               ccAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACagag                                                                         <  2:1180394/93‑1 (MQ=255)

               ccAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACagag                                                                         <  1:2712896/93‑1 (MQ=255)

               ccAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACagag                                                                         <  1:2554538/93‑1 (MQ=255)

                cAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACagagc                                                                        >  1:3441644/1‑92 (MQ=255)

                cAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGt                                                                        >  1:3185238/1‑93 (MQ=255)

                cAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGt                                                                        <  2:3526556/93‑1 (MQ=255)

                 aGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTc                                                                       >  2:4654166/1‑93 (MQ=255)

                  gAACCTTCATCAGCAGCATAAACCGGTGCAGTTAACAGCACAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTcc                                                                      <  2:3120631/93‑1 (MQ=255)

                  gAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTcc                                                                      <  1:4000877/93‑1 (MQ=255)

                  gAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTcc                                                                      >  1:931513/1‑93 (MQ=255)

                       ttCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTaa                                                                 <  2:2839941/93‑1 (MQ=255)

                         catcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAgg                                                               <  1:4061064/93‑1 (MQ=255)

                         catcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAgg                                                               <  1:1347641/93‑1 (MQ=255)

                          atcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGa                                                              <  2:118531/93‑1 (MQ=255)

                           tcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGat                                                             <  2:843233/93‑1 (MQ=255)

                           tcaGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGat                                                             <  1:739746/93‑1 (MQ=255)

                             agcagcATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGatat                                                           >  2:1497787/1‑93 (MQ=255)

                               cagcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAg                                                         <  1:3612712/93‑1 (MQ=255)

                               cagcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAg                                                         <  1:3246837/93‑1 (MQ=255)

                                agcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGa                                                        >  1:2502585/1‑93 (MQ=255)

                                 gcaTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGaa                                                       <  2:2782584/93‑1 (MQ=255)

                                 gcaTAAACAGGGGCAGTCAACAGCAGACATACGACCACTGCGTCAAATGTTTATTGCCCATTAAACATAACAGAGTCCTTTAAAGATATAGaa                                                       <  2:4427687/93‑1 (MQ=255)

                                  caTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAAt                                                      <  1:4073760/93‑1 (MQ=255)

                                  caTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAAt                                                      <  2:4648006/93‑1 (MQ=255)

                                   aTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATa                                                     <  1:4332416/93‑1 (MQ=255)

                                   aTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATa                                                     >  1:2731112/1‑93 (MQ=255)

                                   aTAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATa                                                     <  1:834920/93‑1 (MQ=255)

                                     aaaCAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAgg                                                   <  2:1638025/93‑1 (MQ=255)

                                     aaaCAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAgg                                                   <  2:931646/93‑1 (MQ=255)

                                     aaaCAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAgg                                                   <  1:4228938/93‑1 (MQ=255)

                                       aCAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAgggg                                                 <  1:2219159/93‑1 (MQ=255)

                                        cAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGt                                                <  2:3042432/93‑1 (MQ=255)

                                         aGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGta                                               <  1:2647720/93‑1 (MQ=255)

                                          ggTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGtat                                              <  1:2469611/93‑1 (MQ=255)

                                           gTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGtata                                             <  1:1535049/93‑1 (MQ=255)

                                           gTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGtata                                             <  2:1663640/93‑1 (MQ=255)

                                            tGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAg                                            <  1:3456666/93‑1 (MQ=255)

                                              cAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCt                                          >  2:3457820/1‑93 (MQ=255)

                                               aGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTa                                         <  2:2007507/93‑1 (MQ=255)

                                               aGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTa                                         >  1:4384931/1‑93 (MQ=255)

                                                gTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAc                                        >  1:2264629/1‑93 (MQ=255)

                                                gTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAc                                        <  2:551842/93‑1 (MQ=255)

                                                gTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAc                                        >  2:3821704/1‑93 (MQ=255)

                                                gTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAc                                        >  2:214066/1‑93 (MQ=255)

                                                gTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTAc                                        <  1:3892504/93‑1 (MQ=255)

                                                  gAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGc                                      <  1:1350886/93‑1 (MQ=255)

                                                     cagcagAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAg                                   <  1:2754254/93‑1 (MQ=255)

                                                       gcagAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGaa                                 <  1:2565460/93‑1 (MQ=255)

                                                       gcagAGATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGaa                                 <  2:3997401/93‑1 (MQ=255)

                                                         agagATACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAata                               <  1:3977285/93‑1 (MQ=255)

                                                           agaTACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATc                             <  2:2926780/93‑1 (MQ=255)

                                                           agaTACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATc                             <  1:1145285/93‑1 (MQ=255)

                                                           agaTACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATc                             >  1:3309345/1‑93 (MQ=255)

                                                              tACGGCCAGTGCGGCTAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTa                          <  2:1084553/93‑1 (MQ=255)

                                                              tACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTa                          >  2:3472425/1‑93 (MQ=255)

                                                              tACGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTa                          <  2:4082518/93‑1 (MQ=255)

                                                               aCGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAt                         <  1:682896/93‑1 (MQ=255)

                                                                cGGCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTAtt                        >  1:3906004/1‑93 (MQ=255)

                                                                  gCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTg                      <  2:3574338/93‑1 (MQ=255)

                                                                  gCCAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTg                      >  1:1251318/1‑93 (MQ=255)

                                                                    cAGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGat                    >  2:2109351/1‑93 (MQ=255)

                                                                     aGTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatt                   <  1:1613595/93‑1 (MQ=255)

                                                                      gTGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGatta                  <  2:2041173/93‑1 (MQ=255)

                                                                       tGCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGattat                 <  2:1768090/93‑1 (MQ=255)

                                                                        gCGGCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGattatt                <  2:2300977/93‑1 (MQ=255)

                                                                          ggCCAATGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGc              <  1:1975371/93‑1 (MQ=255)

                                                                              aaTGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagt          >  1:315308/1‑93 (MQ=255)

                                                                               aTGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtt         <  2:3374767/93‑1 (MQ=255)

                                                                                tGTTTTTTGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagttt        >  1:2314525/1‑93 (MQ=255)

                                                                                   tttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagttttta     <  1:4275020/93‑1 (MQ=255)

                                                                                   tttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagttttta     <  2:1852562/93‑1 (MQ=255)

                                                                                   tttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagttttta     <  1:47056/93‑1 (MQ=255)

                                                                                    ttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtttttag    <  2:1463718/93‑1 (MQ=255)

                                                                                    ttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtttttag    <  2:1909645/93‑1 (MQ=255)

                                                                                    ttttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtttttag    <  1:2595055/93‑1 (MQ=255)

                                                                                      ttGCCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCtagtttttagtt  <  2:1361160/93‑1 (MQ=255)

TTAAAGTGAATTTCGCCAGAACCTTCATCAGCAGCATAAACAGGTGCAGTGAACAGCAGAGATACGGCCAGTGCGGCCAATGTTTTTTGTCCTTTAAACATAACAGAGTCCTTTAAGGATATAGAATAGGGGTATAGCTACGCCAGAATATCGTATTTGATTATTGCTAGTTTTTAGTT  >  NC_000913/751918‑752096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`