BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	780,918	T→C	intergenic (+43/‑390)	lysQ → / → nadA	tRNA‑Lys/quinolinate synthetase A protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	780,918	0	T	C	100.0%	361.1 / NA	150	intergenic (+43/‑390)	lysQ/nadA	tRNA‑Lys/quinolinate synthetase A protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/68); total (82/68)

Only 100 of 155 total aligned reads displayed.

TGACTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGC  >  NC_000913/780828‑780999

tGACTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGacac                                                                                 <  1:4100139/93‑1 (MQ=18)

 gACTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACt                                                                                >  1:3044662/1‑93 (MQ=18)

 gACTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACt                                                                                >  2:769601/1‑93 (MQ=18)

  aCTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTc                                                                               >  2:492357/1‑93 (MQ=18)

  aCTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTc                                                                               >  2:1801915/1‑93 (MQ=18)

   cTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGTGTCCTAAAGGCGCTTTTTTGCTACCTGCGACACTCa                                                                              >  2:2655823/1‑93 (MQ=11)

   cTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCa                                                                              <  1:1617682/93‑1 (MQ=18)

    ttttAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaa                                                                             >  1:147737/1‑93 (MQ=18)

    ttttAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaa                                                                             >  2:1352767/1‑93 (MQ=18)

     tttAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaaa                                                                            <  2:3777390/93‑1 (MQ=18)

     tttAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaaa                                                                            <  2:4516450/93‑1 (MQ=18)

     tttAATCAATT‑GGTCGCAGGTTCAAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCaaa                                                                            <  2:4645885/93‑1 (MQ=16)

      ttAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAg                                                                           <  1:2333061/93‑1 (MQ=21)

       taattaatTGGGTCCAAGTTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAg                                                                           <  1:649350/93‑1 (MQ=11)

       tAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGa                                                                          <  2:4294339/93‑1 (MQ=18)

        aaTCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGAt                                                                         <  1:267592/93‑1 (MQ=18)

        aaTCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGAt                                                                         <  1:2809545/93‑1 (MQ=21)

        aaTCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGAt                                                                         <  1:1022172/93‑1 (MQ=21)

         aTCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGAtt                                                                        <  1:593188/93‑1 (MQ=21)

          tCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTc                                                                       >  1:1193450/1‑93 (MQ=18)

              tt‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCGTTTTTGCTATCTGCGACACTCAAAGATTAGAAc                                                                   >  2:1231982/1‑93 (MQ=255)

               t‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAAcc                                                                  <  2:3991983/93‑1 (MQ=21)

               t‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAAcc                                                                  <  2:2734810/93‑1 (MQ=18)

                 ggTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCt                                                                 <  2:4643453/93‑1 (MQ=21)

                  gTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTg                                                                <  2:708220/93‑1 (MQ=18)

                   tCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgc                                                               >  1:206406/1‑93 (MQ=18)

                    cGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgca                                                              <  1:3092781/93‑1 (MQ=18)

                     gCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgcag                                                             >  2:3372288/1‑93 (MQ=18)

                       aGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTgcagca                                                           >  2:2184729/1‑93 (MQ=18)

                        ggTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGcagcag                                                          >  2:1562253/1‑93 (MQ=18)

                        ggTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGcagcag                                                          <  1:2163635/93‑1 (MQ=18)

                        ggTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAACTCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGcagcag                                                          <  1:3769209/93‑1 (MQ=255)

                         gTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAgg                                                         >  1:2992378/1‑93 (MQ=18)

                          tcggAACCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGt                                                        <  1:12306/90‑1 (MQ=255)

                           tCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGtt                                                       <  1:3932813/93‑1 (MQ=21)

                            cGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGttt                                                      <  1:3443549/93‑1 (MQ=21)

                              aaTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttga                                                    <  2:1452682/93‑1 (MQ=18)

                               aTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttgag                                                   <  2:3559223/93‑1 (MQ=21)

                               aTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttgag                                                   >  2:393692/1‑93 (MQ=18)

                                  cTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTttgagttg                                                >  2:1992777/1‑93 (MQ=18)

                                   tGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGAAGGTttgagttga                                               >  2:3016308/1‑93 (MQ=16)

                                    gCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACCCTCAAAGATTCGAACCTGCAGCAGGTttgagttgag                                              <  2:3230517/93‑1 (MQ=16)

                                     cACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAgc                                             <  1:1750038/93‑1 (MQ=18)

                                        gACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa                                          <  2:2221515/93‑1 (MQ=18)

                                        gACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa                                          >  1:2328353/1‑93 (MQ=18)

                                          cccACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGc                                        >  2:2051376/1‑93 (MQ=18)

                                           ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCg                                       >  1:1246884/1‑93 (MQ=18)

                                           ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCg                                       >  1:4563958/1‑93 (MQ=18)

                                           ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCg                                       >  1:200863/1‑93 (MQ=18)

                                           ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCg                                       >  1:1433636/1‑93 (MQ=18)

                                           ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCg                                       >  2:719407/1‑93 (MQ=18)

                                            caccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGa                                      >  1:2656424/1‑93 (MQ=18)

                                             accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaa                                     <  1:3283888/93‑1 (MQ=18)

                                             accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaa                                     >  1:1854167/1‑93 (MQ=18)

                                             accaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaa                                     >  2:3795568/1‑93 (MQ=18)

                                              ccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaaa                                    >  2:1778614/1‑93 (MQ=21)

                                              ccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGaaa                                    >  1:3842115/1‑93 (MQ=18)

                                               caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaac                                   >  2:556254/1‑93 (MQ=18)

                                                  tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaac                                >  2:3420897/1‑93 (MQ=18)

                                                  tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaac                                <  2:1939750/93‑1 (MQ=18)

                                                  tGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaacaac                                <  1:2166855/93‑1 (MQ=18)

                                                   gTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACg                               <  1:903288/93‑1 (MQ=18)

                                                    tAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACgg                              >  2:101963/1‑93 (MQ=21)

                                                      aaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAg                            >  2:1567073/1‑93 (MQ=21)

                                                      aaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAg                            >  2:181502/1‑93 (MQ=18)

                                                      aaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAg                            >  1:2077622/1‑93 (MQ=21)

                                                          aGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGc                        <  2:866089/93‑1 (MQ=18)

                                                           gcgcCCTAAAGGCGGTTTTTTGCTATCTGCGACGCTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt                       <  1:3215358/93‑1 (MQ=255)

                                                           gcgcCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt                       >  2:1318133/1‑93 (MQ=21)

                                                           gcgcCCTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt                       >  1:1326413/1‑93 (MQ=21)

                                                           gcgcCCTAAAGCCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCt                       <  2:2680230/93‑1 (MQ=16)

                                                              cccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc                    <  1:98320/93‑1 (MQ=18)

                                                              cccTAAAGCCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgc                    <  2:4213918/93‑1 (MQ=16)

                                                               ccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCGGCTggcg                   >  1:1401213/1‑93 (MQ=255)

                                                               ccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgcg                   >  2:2756452/1‑93 (MQ=21)

                                                               ccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgcg                   <  1:434698/93‑1 (MQ=18)

                                                               ccTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTcgcg                   >  1:384185/1‑93 (MQ=18)

                                                                cTAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcgg                  >  2:1648992/1‑93 (MQ=21)

                                                                 tAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc                 >  2:1891572/1‑93 (MQ=21)

                                                                 tAAAGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCgcggc                 >  1:244477/1‑93 (MQ=21)

                                                                   aaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGa               >  2:1465610/1‑93 (MQ=21)

                                                                   aaGGCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGa               <  2:4173030/93‑1 (MQ=18)

                                                                    agccgcTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGAc              <  1:753889/90‑1 (MQ=16)

                                                                     tgcgtTTTTTCGCTATCGGCGACACTCAAAGATTCGAACCTGCAGCAGGTTGGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACg             <  2:108960/92‑1 (MQ=11)

                                                                     ggCGCTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACg             >  2:2639142/1‑93 (MQ=21)

                                                                       cgcTTTTTTGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGc           >  2:1662614/1‑93 (MQ=21)

                                                                          ttttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCg        >  2:3166568/1‑93 (MQ=21)

                                                                          ttttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCg        >  1:992600/1‑93 (MQ=18)

                                                                           tttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa       >  2:4261430/1‑93 (MQ=21)

                                                                           tttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa       >  1:1897153/1‑93 (MQ=21)

                                                                           tttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa       >  1:3920596/1‑93 (MQ=21)

                                                                            ttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGaa      >  2:4497041/1‑93 (MQ=18)

                                                                            ttttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGaa      <  1:3601171/93‑1 (MQ=18)

                                                                             tttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAg     <  2:4335591/93‑1 (MQ=18)

                                                                             tttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAg     <  2:68512/93‑1 (MQ=18)

                                                                              ttGCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAgg    <  1:3627166/93‑1 (MQ=18)

                                                                                gCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGCAgggg  >  2:405085/1‑92 (MQ=9)

                                                                                gCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc  <  2:4621245/93‑1 (MQ=14)

                                                                                gCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc  >  1:3372414/1‑93 (MQ=14)

                                                                                gCTATCTGCGACACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc  >  2:2905105/1‑93 (MQ=14)

TGACTTTTAATCAATT‑GGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGC  >  NC_000913/780828‑780999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`