BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	812,754	T→C	S2S (AGT→AGC)	uvrB →	DNA repair; excision nuclease subunit B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	812,754	0	T	C	100.0%	497.4 / NA	156	S2S (AGT→AGC)	uvrB	DNA repair; excision nuclease subunit B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/70); total (86/70)

Only 100 of 158 total aligned reads displayed.

TTATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCC  >  NC_000913/812665‑812842

ttATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCaaa                                                                                       <  2:613921/93‑1 (MQ=255)

ttATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCaaa                                                                                       >  2:2432239/1‑93 (MQ=255)

ttATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCaaa                                                                                       >  2:1046131/1‑93 (MQ=255)

 tATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAAc                                                                                      <  1:3745363/93‑1 (MQ=255)

 tATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAAc                                                                                      >  2:2148359/1‑93 (MQ=255)

   tCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCg                                                                                    >  2:4654627/1‑93 (MQ=255)

     cAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGtt                                                                                  >  1:750863/1‑93 (MQ=255)

      aGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTc                                                                                 >  2:3136162/1‑93 (MQ=255)

       gTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCa                                                                                >  1:811171/1‑93 (MQ=255)

       gTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCa                                                                                >  2:4222116/1‑93 (MQ=255)

        tataATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCaa                                                                               >  1:937061/1‑93 (MQ=255)

        tataATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCaa                                                                               >  2:3773350/1‑93 (MQ=255)

        tataATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCaa                                                                               >  1:2888946/1‑93 (MQ=255)

         ataATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCaaa                                                                              <  1:3040580/93‑1 (MQ=255)

         ataATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCaaa                                                                              >  1:3020948/1‑93 (MQ=255)

          taATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAAc                                                                             >  2:1335728/1‑93 (MQ=255)

           aaTTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACt                                                                            <  1:1038713/93‑1 (MQ=255)

            aTTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTg                                                                           >  2:1115937/1‑93 (MQ=255)

              ttgttgGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCGAACTGaa                                                                         <  2:3635071/93‑1 (MQ=255)

              ttgttgGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGaa                                                                         >  2:603240/1‑93 (MQ=255)

               tgttgGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAAt                                                                        >  1:3156901/1‑93 (MQ=255)

                  tgGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTcc                                                                     <  2:3106927/93‑1 (MQ=255)

                    gCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGc                                                                   <  2:2217930/93‑1 (MQ=255)

                    gCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGc                                                                   <  1:157564/93‑1 (MQ=255)

                      aTAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCtt                                                                 >  1:2045587/1‑93 (MQ=255)

                      aTAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCtt                                                                 <  2:4540084/93‑1 (MQ=255)

                       tAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCttt                                                                >  2:39156/1‑93 (MQ=255)

                        aaTTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCtttt                                                               >  2:2857892/1‑93 (MQ=255)

                        aaTTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCtttt                                                               >  2:1931811/1‑93 (MQ=255)

                         aTTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTa                                                              <  1:4254017/93‑1 (MQ=255)

                          ttAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTaa                                                             <  1:1311896/93‑1 (MQ=255)

                           tAAGTACGACGAGTAAAATTACATACCTGCCCGCCCACTTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAGTTCCGCTTTTaaa                                                            <  2:2002341/93‑1 (MQ=255)

                           tAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTaaa                                                            <  2:121304/93‑1 (MQ=255)

                             aGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAAcc                                                          >  1:4329044/1‑93 (MQ=255)

                              gTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCt                                                         <  1:135769/93‑1 (MQ=255)

                                 cgacgaGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCt                                                      <  1:1502414/93‑1 (MQ=255)

                                 cgacgaGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAACTCCGCTTTTAAACCTTCt                                                      <  2:2550313/93‑1 (MQ=255)

                                  gacgaGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTg                                                     >  2:1377614/1‑93 (MQ=255)

                                  gacgaGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTg                                                     <  1:839070/93‑1 (MQ=255)

                                    cgaGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGc                                                   >  2:2438122/1‑93 (MQ=255)

                                    cgaGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGc                                                   <  1:1624673/93‑1 (MQ=255)

                                         aaaaTTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCa                                              <  2:1481972/93‑1 (MQ=255)

                                          aaaTTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAg                                             <  1:3681290/93‑1 (MQ=255)

                                           aaTTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGc                                            <  2:2188216/93‑1 (MQ=255)

                                           aaTTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGc                                            <  1:245246/93‑1 (MQ=255)

                                           aaTTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGc                                            >  1:3102563/1‑93 (MQ=255)

                                             ttACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCa                                          >  2:3150378/1‑93 (MQ=255)

                                             ttACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCa                                          >  1:2166386/1‑93 (MQ=255)

                                               aCATACCTGCCCGCCCAACTCCTTCAGGTAGCGGCTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCaga                                        >  2:758903/1‑93 (MQ=255)

                                               aCATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCaga                                        <  1:3225608/93‑1 (MQ=255)

                                               aCATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCaga                                        <  1:2776205/93‑1 (MQ=255)

                                                cATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCACGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCagag                                       <  1:838750/93‑1 (MQ=255)

                                                 aTACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAgg                                      >  2:1676245/1‑93 (MQ=255)

                                                 aTACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAgg                                      >  1:4343274/1‑93 (MQ=255)

                                                 aTACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAgg                                      <  1:176875/93‑1 (MQ=255)

                                                  tACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGc                                     >  2:3905544/1‑93 (MQ=255)

                                                     cTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGAt                                  <  2:2698105/93‑1 (MQ=255)

                                                         ccgcccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGa                              >  2:581311/1‑93 (MQ=255)

                                                         ccgcccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGa                              <  2:177731/93‑1 (MQ=255)

                                                            cccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGt                           >  1:1209712/1‑93 (MQ=255)

                                                            cccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGt                           <  1:1761056/93‑1 (MQ=255)

                                                             ccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtt                          >  1:3836205/1‑92 (MQ=255)

                                                             ccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtc                          >  1:323738/1‑93 (MQ=255)

                                                             ccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtc                          >  1:3836211/1‑93 (MQ=255)

                                                             ccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtc                          >  2:4113799/1‑93 (MQ=255)

                                                             ccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtc                          >  1:1223124/1‑93 (MQ=255)

                                                             ccAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtc                          >  2:1459692/1‑93 (MQ=255)

                                                              cAACTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtct                         >  1:399320/1‑93 (MQ=255)

                                                               aaCTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtctc                        >  2:1656250/1‑93 (MQ=255)

                                                               aaCTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtctc                        >  1:3551674/1‑93 (MQ=255)

                                                               aaCTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGtctc                        >  2:4415747/1‑93 (MQ=255)

                                                                 cTCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGa                      >  1:4471423/1‑93 (MQ=255)

                                                                  tCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGaa                     >  1:4016045/1‑93 (MQ=255)

                                                                  tCCTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGaa                     >  2:1840744/1‑93 (MQ=255)

                                                                    cTTCAGGTAGCGACTCATGAGCAACCCGTTCAAACTGAATTCCGCTTTTAAGCCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAaga                   <  1:4241026/93‑1 (MQ=255)

                                                                    cTTCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAaga                   <  1:1022007/93‑1 (MQ=255)

                                                                     ttCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAagag                  <  2:4180790/93‑1 (MQ=255)

                                                                     ttCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAagag                  >  2:490053/1‑93 (MQ=255)

                                                                      tCAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAgg                 <  2:2765797/93‑1 (MQ=255)

                                                                       cAGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAggg                <  1:13918/93‑1 (MQ=255)

                                                                        aGGTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAgggg               <  1:3661364/93‑1 (MQ=255)

                                                                         ggTAGCGACTCATGAGCAAACCGTTGAAACTGAACTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGc              <  1:2739111/93‑1 (MQ=255)

                                                                         ggTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGc              <  2:927467/93‑1 (MQ=255)

                                                                         ggTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGc              >  2:1130907/1‑93 (MQ=255)

                                                                         ggTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGc              <  1:2544421/93‑1 (MQ=255)

                                                                         ggTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGc              >  1:976337/1‑93 (MQ=255)

                                                                         ggTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGc              <  1:624780/93‑1 (MQ=255)

                                                                          gTAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCt             <  1:1968610/93‑1 (MQ=255)

                                                                           tAGCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTg            >  1:3428572/1‑93 (MQ=255)

                                                                             gCGACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGa          <  2:2956102/93‑1 (MQ=255)

                                                                               gACTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAg        >  1:4114974/1‑93 (MQ=255)

                                                                                 cTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGAt      >  2:4314607/1‑93 (MQ=255)

                                                                                 cTCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGAt      <  2:4316172/93‑1 (MQ=255)

                                                                                  tCATGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATg     <  1:4415013/93‑1 (MQ=255)

                                                                                  tCATGAGCAAACAGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATg     >  2:4423384/1‑93 (MQ=255)

                                                                                   cATGAGCAAACCGCTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATgg    <  1:2678856/93‑1 (MQ=255)

                                                                                    aTGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGc   >  2:2073055/1‑93 (MQ=255)

                                                                                    aTGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGc   <  1:1332613/93‑1 (MQ=255)

                                                                                     tGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGcc  <  2:3241833/93‑1 (MQ=255)

                                                                                     tGAGCAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGcc  <  2:4311629/93‑1 (MQ=255)

TTATCCAGTATAATTTGTTGGCATAATTAAGTACGACGAGTAAAATTACATACCTGCCCGCCCAACTCCTTCAGGTAGCGACTCATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCC  >  NC_000913/812665‑812842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`