Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 829,583 A→G I99T (ATC→ACC)  ybiH ← putative transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913829,5830AG99.2% 412.7 / ‑4.6 132I99T (ATC→ACC) ybiHputative transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (74/57);  total (75/57)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01

Only 100 of 135 total aligned reads displayed.

CACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATC  >  NC_000913/829494‑829672
                                                                                         |                                                                                         
cACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTgg                                                                                        >  2:1738980/1‑93 (MQ=255)
  cGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCa                                                                                      >  2:1500490/1‑93 (MQ=255)
  cGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCa                                                                                      <  1:1499653/93‑1 (MQ=255)
   gggAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAg                                                                                     >  2:204171/1‑93 (MQ=255)
    ggAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGc                                                                                    >  2:835310/1‑93 (MQ=255)
    ggAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGc                                                                                    >  2:2861329/1‑93 (MQ=255)
     gagaTAAACTTGCTGAGTTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGcc                                                                                   <  1:2304186/93‑1 (MQ=255)
     gagaTAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGcc                                                                                   >  2:3175862/1‑93 (MQ=255)
     gagaTAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGcc                                                                                   >  1:3872305/1‑93 (MQ=255)
      agaTAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGccc                                                                                  <  2:2271906/93‑1 (MQ=255)
      agaTAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGccc                                                                                  >  1:3290117/1‑93 (MQ=255)
       gaTAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCg                                                                                 >  1:3510411/1‑93 (MQ=255)
         tAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGAt                                                                               >  1:2723638/1‑93 (MQ=255)
           aaCTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATcg                                                                             >  2:1001698/1‑92 (MQ=255)
           aaCTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCa                                                                             >  2:1554364/1‑93 (MQ=255)
           aaCTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTCCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCa                                                                             <  1:1892705/93‑1 (MQ=255)
            aCTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAg                                                                            <  2:2814972/93‑1 (MQ=255)
              ttGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGc                                                                          >  2:193694/1‑93 (MQ=255)
              ttGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGc                                                                          >  2:2986956/1‑93 (MQ=255)
              ttGCTGAGGTTGACGGTGTCATCCTGGCTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGc                                                                          <  1:2558702/93‑1 (MQ=255)
                gCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCtg                                                                        <  1:2571184/93‑1 (MQ=255)
                   gAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTgg                                                                     <  1:3568252/93‑1 (MQ=255)
                    aGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGt                                                                    >  1:4194607/1‑93 (MQ=255)
                    aGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGt                                                                    >  1:639734/1‑93 (MQ=255)
                    aGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGt                                                                    >  1:3818939/1‑93 (MQ=255)
                     ggTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGtt                                                                   >  1:1688639/1‑93 (MQ=255)
                     ggTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGtt                                                                   <  1:1999/93‑1 (MQ=255)
                     ggTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGtt                                                                   <  2:4165027/93‑1 (MQ=255)
                       ttGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTgc                                                                 >  2:768014/1‑93 (MQ=255)
                        tGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTgcg                                                                <  2:2843391/93‑1 (MQ=255)
                             gtgtCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAAc                                                           >  2:1936990/1‑93 (MQ=255)
                             gtgtCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAAc                                                           >  2:4625208/1‑93 (MQ=255)
                              tgtCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACa                                                          >  2:2812646/1‑93 (MQ=255)
                               gtCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACaa                                                         <  1:3364722/93‑1 (MQ=255)
                                tCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAg                                                        <  2:58541/93‑1 (MQ=255)
                                tCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAg                                                        <  1:3144983/93‑1 (MQ=255)
                                  aTCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCg                                                      <  1:2147651/93‑1 (MQ=255)
                                   tCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGt                                                     >  1:332480/1‑93 (MQ=255)
                                   tCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGt                                                     >  2:260210/1‑93 (MQ=255)
                                   tCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGt                                                     <  1:2857941/93‑1 (MQ=255)
                                   tCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGt                                                     >  1:2354691/1‑93 (MQ=255)
                                    ccTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGtt                                                    <  2:3852954/93‑1 (MQ=255)
                                     cTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTc                                                   <  1:4485252/93‑1 (MQ=255)
                                     cTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTc                                                   <  2:1102952/93‑1 (MQ=255)
                                     cTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTc                                                   <  2:2568231/93‑1 (MQ=255)
                                     cTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTc                                                   <  2:338268/93‑1 (MQ=255)
                                      tGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCg                                                  >  1:2878784/1‑93 (MQ=255)
                                       gggTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCgg                                                 >  1:1929217/1‑93 (MQ=255)
                                        ggTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGc                                                >  1:38055/1‑93 (MQ=255)
                                         gTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCt                                               <  1:2739156/93‑1 (MQ=255)
                                           gAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTc                                             <  2:1626443/93‑1 (MQ=255)
                                            agcagcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTcc                                            <  2:4246350/93‑1 (MQ=255)
                                            agcagcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTcc                                            <  1:2246036/93‑1 (MQ=255)
                                            agcagcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTcc                                            <  1:946430/93‑1 (MQ=255)
                                            agcagcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTcc                                            >  1:1750235/1‑93 (MQ=255)
                                              cagcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTc                                          >  2:2447371/1‑93 (MQ=255)
                                              cagcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTc                                          >  1:2602715/1‑93 (MQ=255)
                                               agcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCg                                         >  2:4430432/1‑93 (MQ=255)
                                                gcTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCgg                                        >  1:2749019/1‑93 (MQ=255)
                                                 cTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGc                                       <  1:1097791/93‑1 (MQ=255)
                                                  ttAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCgggt                                      >  2:2089445/1‑91 (MQ=255)
                                                  ttAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCa                                      >  2:493599/1‑93 (MQ=255)
                                                  ttAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCa                                      <  2:2296673/93‑1 (MQ=255)
                                                   tAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCAt                                     <  2:108247/93‑1 (MQ=255)
                                                   tAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCAt                                     <  1:2074761/93‑1 (MQ=255)
                                                   tAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCAt                                     <  1:910005/93‑1 (MQ=255)
                                                   tAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCAt                                     >  1:528548/1‑93 (MQ=255)
                                                     aTCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATgg                                   >  2:185022/1‑92 (MQ=255)
                                                     aTCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGc                                   <  2:1260413/93‑1 (MQ=255)
                                                     aTCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGc                                   >  1:3662555/1‑93 (MQ=255)
                                                     aTCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGc                                   <  1:1159722/93‑1 (MQ=255)
                                                     aTCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGc                                   <  1:3989497/93‑1 (MQ=255)
                                                        aTGTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGcgga                                >  1:1637227/1‑93 (MQ=255)
                                                          gTTCCTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGcggacg                              <  1:810863/93‑1 (MQ=255)
                                                             ccTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGCCGGaa                           >  2:2080501/1‑93 (MQ=255)
                                                             ccTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGaa                           >  1:3555040/1‑93 (MQ=255)
                                                              cTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAAc                          >  1:285427/1‑93 (MQ=255)
                                                              cTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAAc                          >  1:1052913/1‑93 (MQ=255)
                                                              cTGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAAc                          <  2:3821363/93‑1 (MQ=255)
                                                               tGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATTCGGGCGGGACt                         >  1:1270977/1‑93 (MQ=255)
                                                               tGCAGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACt                         <  1:1330710/93‑1 (MQ=255)
                                                                  aGGCGCGAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCt                      >  1:1360077/1‑93 (MQ=255)
                                                                        gAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGAGGGAACTGCTCGCCaa                >  2:3886410/1‑93 (MQ=255)
                                                                        gAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCaa                <  2:405005/93‑1 (MQ=255)
                                                                        gAAGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCaa                >  1:647815/1‑93 (MQ=255)
                                                                         aaGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAAt               >  1:1868005/1‑93 (MQ=255)
                                                                          aGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATa              >  2:2243501/1‑93 (MQ=255)
                                                                          aGGATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATa              >  2:639279/1‑93 (MQ=255)
                                                                           ggATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATaa             >  2:21343/1‑93 (MQ=255)
                                                                           ggATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATaa             <  2:4286412/93‑1 (MQ=255)
                                                                           ggATCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATaa             >  2:1503170/1‑93 (MQ=255)
                                                                              tCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAAt          >  1:4032153/1‑93 (MQ=255)
                                                                              tCAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAAt          >  1:1868078/1‑93 (MQ=255)
                                                                               cAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATc         <  1:1546281/93‑1 (MQ=255)
                                                                               cAGTTCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATc         <  1:4248060/93‑1 (MQ=255)
                                                                                aggtCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCg        <  1:3965716/90‑1 (MQ=255)
                                                                                  ttCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGc      <  2:4562931/93‑1 (MQ=255)
                                                                                  ttCACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGc      >  1:1709710/1‑93 (MQ=255)
                                                                                    cACGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCaa    <  1:2030581/93‑1 (MQ=255)
                                                                                      cGGGTGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATc  >  2:1288113/1‑93 (MQ=255)
                                                                                         |                                                                                         
CACGGGAGATAAACTTGCTGAGGTTGACGGTGTCATCCTGGGTGAGCAGCTTAATCATGTTCCTGCAGGCGCGAAGGATCAGTTCACGGATGGCAGCCCGATCAGGCTGTGGTTGCGCGAACAAGCGTTCGGCTTCCTCGGCATGCGGACGGAACTGCTCGCCAATAAAATCGGCAATC  >  NC_000913/829494‑829672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: