BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	832,142	A→G	V11A (GTC→GCC)	ybiA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	832,142	0	A	G	99.2%	417.0 / NA	135	V11A (GTC→GCC)	ybiA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (49/83); total (50/85)
Fisher's exact test for biased strand distribution p-value = 3.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 138 total aligned reads displayed.

CCGTCAACCTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGACGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCATT  >  NC_000913/832052‑832231

ccGTCAACCTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAGTTTATGATGGTGTCTTGCATGGCg                                                                                         >  2:414347/1‑93 (MQ=255)

ccGTCAACCTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCg                                                                                         <  2:3745014/93‑1 (MQ=255)

ccGTCAACCTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCg                                                                                         >  2:3853044/1‑93 (MQ=255)

    cAACCTTGATGGGCCAGGCTGCAAAGTTAGAAAAATCACCGTAGTAATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGtt                                                                                     <  2:4372385/93‑1 (MQ=255)

     aaCCTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTg                                                                                    <  2:4318227/93‑1 (MQ=255)

      aCCTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTgg                                                                                   >  1:255497/1‑93 (MQ=255)

       ccTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGa                                                                                  >  1:4428361/1‑93 (MQ=255)

       ccTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGa                                                                                  <  2:1698314/93‑1 (MQ=255)

       ccTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGa                                                                                  <  2:1163709/93‑1 (MQ=255)

       acTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGa                                                                                  <  1:1181300/92‑1 (MQ=255)

        cTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGAt                                                                                 >  1:1299107/1‑93 (MQ=255)

        cTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGAt                                                                                 >  2:1855138/1‑93 (MQ=255)

          tGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATcc                                                                               <  1:2327421/93‑1 (MQ=255)

           gATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCt                                                                              >  1:2432603/1‑93 (MQ=255)

              gggCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTtg                                                                           <  2:6941/93‑1 (MQ=255)

              gggCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTtg                                                                           <  2:4172965/93‑1 (MQ=255)

               ggCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTtgt                                                                          <  2:3554968/93‑1 (MQ=255)

                gCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTtgtg                                                                         <  1:3911840/93‑1 (MQ=255)

                gCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTtgtg                                                                         <  1:2334517/93‑1 (MQ=255)

                 ccAGGCGTCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGc                                                                        <  2:3167787/93‑1 (MQ=255)

                 ccAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTtgtgt                                                                        >  2:37850/1‑92 (MQ=255)

                 ccAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGc                                                                        <  2:3410106/93‑1 (MQ=255)

                 ccAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGc                                                                        <  1:4201458/93‑1 (MQ=255)

                 ccAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGc                                                                        <  1:1865116/93‑1 (MQ=255)

                      cggcAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGaa                                                                   <  1:2389666/93‑1 (MQ=255)

                      cggcAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGaa                                                                   <  1:399563/93‑1 (MQ=255)

                        gcAGAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGCAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACg                                                                 <  2:3560306/93‑1 (MQ=255)

                        gcAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACg                                                                 >  2:1040005/1‑93 (MQ=255)

                        gcAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACg                                                                 <  1:2574900/93‑1 (MQ=255)

                        gcAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACg                                                                 <  2:3808531/93‑1 (MQ=255)

                         cAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACgg                                                                <  2:465861/93‑1 (MQ=255)

                         cAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACgg                                                                <  2:2329105/93‑1 (MQ=255)

                          aaaGTTAGAAAAATCACCGTAGTTATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACggg                                                               <  1:4485707/93‑1 (MQ=255)

                           aaGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGc                                                              <  2:562984/93‑1 (MQ=255)

                            aGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCa                                                             <  2:4524616/93‑1 (MQ=255)

                             gTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCAt                                                            <  2:1835076/93‑1 (MQ=255)

                             gTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCAt                                                            >  1:1880894/1‑93 (MQ=255)

                              ttAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCAtt                                                           >  1:1083207/1‑93 (MQ=255)

                              ttAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCAtt                                                           <  1:2885631/93‑1 (MQ=255)

                                 gAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGACGTGTTGGATCCTTTGTGCTCGAACGGGCATTaaa                                                        >  2:1675209/1‑93 (MQ=255)

                                  aaaaaTCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAAc                                                       <  1:411705/93‑1 (MQ=255)

                                  aaaaaTCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAAc                                                       <  1:2074913/93‑1 (MQ=255)

                                    aaaTCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCg                                                     <  2:4539829/93‑1 (MQ=255)

                                    aaaTCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCg                                                     >  2:2975360/1‑93 (MQ=255)

                                     aaTCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGc                                                    >  1:3222235/1‑93 (MQ=255)

                                      aTCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCa                                                   <  1:2116196/93‑1 (MQ=255)

                                       tCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCAt                                                  <  2:3024419/93‑1 (MQ=255)

                                       tCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCAt                                                  <  1:771604/93‑1 (MQ=255)

                                        cACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCAtt                                                 <  1:1337139/93‑1 (MQ=255)

                                          ccGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTAt                                               <  1:3081360/93‑1 (MQ=255)

                                           cGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATg                                              <  1:4589397/93‑1 (MQ=255)

                                            gTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGt                                             >  2:4476957/1‑93 (MQ=255)

                                            gTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGt                                             >  1:761778/1‑93 (MQ=255)

                                               gTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTtgg                                          >  1:984855/1‑93 (MQ=255)

                                               gTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTtgg                                          <  2:4285429/93‑1 (MQ=255)

                                                tCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTtggt                                         <  1:1347282/93‑1 (MQ=255)

                                                   tCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTggtggt                                      >  1:2343987/1‑93 (MQ=255)

                                                    cGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGtt                                     <  2:3286580/93‑1 (MQ=255)

                                                      cTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTAt                                   >  1:4564674/1‑93 (MQ=255)

                                                       tGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTAtt                                  <  2:1093453/93‑1 (MQ=255)

                                                       tGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTAtt                                  <  2:750159/93‑1 (MQ=255)

                                                        ggTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTg                                 >  1:3236453/1‑93 (MQ=255)

                                                        ggTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTg                                 >  2:541289/1‑93 (MQ=255)

                                                         gTGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGc                                <  1:2025773/93‑1 (MQ=255)

                                                          tGCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCg                               >  1:1979415/1‑93 (MQ=255)

                                                           gCTGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGa                              >  1:3405358/1‑93 (MQ=255)

                                                             tGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTTGTTATTGCGAGc                            <  1:3603740/93‑1 (MQ=255)

                                                             tGTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGc                            >  1:4550257/1‑93 (MQ=255)

                                                              gTAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGcc                           >  1:3522002/1‑93 (MQ=255)

                                                               tAGAAATTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCg                          >  1:4137584/1‑93 (MQ=255)

                                                                aGAAATTTATGATGGTGTCTTGCATGCCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGc                         <  1:2086898/93‑1 (MQ=255)

                                                                  aaaTTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCtt                       <  2:1870414/93‑1 (MQ=255)

                                                                  aaaTTTATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCtt                       <  1:3161475/93‑1 (MQ=255)

                                                                     tttATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTcc                    <  1:763024/93‑1 (MQ=255)

                                                                     tttATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTcc                    <  1:1764745/93‑1 (MQ=255)

                                                                       tATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcag                  >  1:3559835/1‑93 (MQ=255)

                                                                       tATGATGGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcag                  >  1:2982365/1‑93 (MQ=255)

                                                                        atgatgGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcaga                 <  1:130035/93‑1 (MQ=255)

                                                                        atgatgGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcaga                 <  2:1916868/93‑1 (MQ=255)

                                                                          gatgGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaa               <  2:2581069/93‑1 (MQ=255)

                                                                          gatgGTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaa               >  2:678132/1‑93 (MQ=255)

                                                                             ggTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacag            <  1:3342693/93‑1 (MQ=255)

                                                                             ggTGTCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacag            <  2:906983/93‑1 (MQ=255)

                                                                              gtgtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacaga           <  2:3344347/93‑1 (MQ=255)

                                                                               tgtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacagaa          <  2:1208397/93‑1 (MQ=255)

                                                                               tgtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacagaa          >  1:2977309/1‑93 (MQ=255)

                                                                               tgtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacagaa          <  1:259056/93‑1 (MQ=255)

                                                                                gtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCCTTATGTTGGTGGTTATTGCGAGCCGCTTTCtagacacagaaa         >  2:1640397/1‑93 (MQ=255)

                                                                                gtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacagaaa         >  1:1128938/1‑93 (MQ=255)

                                                                                gtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacagaaa         >  2:343171/1‑93 (MQ=255)

                                                                                gtCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCcagaaacagaaa         >  2:3076790/1‑93 (MQ=255)

                                                                                 tCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGaaaa        >  2:4530836/1‑93 (MQ=255)

                                                                                 tCTTGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGaaaa        <  2:1985976/93‑1 (MQ=255)

                                                                                    tGCATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAAcc     <  2:931986/93‑1 (MQ=255)

                                                                                      cATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCAt   >  1:707790/1‑93 (MQ=255)

                                                                                      cATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCAt   <  1:504626/93‑1 (MQ=255)

                                                                                      cATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCAt   <  1:3445914/93‑1 (MQ=255)

                                                                                      cATGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCAt   <  1:1278477/93‑1 (MQ=255)

                                                                                       aTGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCAtt  >  2:2196854/1‑93 (MQ=255)

                                                                                       aTGGCGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCAtt  >  1:3975084/1‑93 (MQ=255)

CCGTCAACCTTGATGGGCCAGGCGGCAAAGTTAGAAAAATCACCGTAGTCATCGCTGGTGCTGTAGAAATTTATGATGGTGTCTTGCATGACGTGTTGGATCCTTTGTGCTCGAACGGGCATTAAACCGCATTATGTTGGTGGTTATTGCGAGCCGCTTTCCAGAAACAGAAAAACCATT  >  NC_000913/832052‑832231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`