BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	922,398	T→C	V88A (GTG→GCG)	yljA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	922,398	0	T	C	100.0%	414.1 / NA	131	V88A (GTG→GCG)	yljA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (53/78); total (53/78)

Only 100 of 135 total aligned reads displayed.

AACGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGTGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTA  >  NC_000913/922309‑922487

aaCGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGaa                                                                                        <  1:1834055/93‑1 (MQ=255)

 aCGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAAc                                                                                       <  1:2766236/93‑1 (MQ=255)

   gCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACaa                                                                                     <  1:3940047/93‑1 (MQ=255)

   gCAATTGATGCTCGCTGTGCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACaa                                                                                     <  2:1998699/93‑1 (MQ=255)

    cAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAg                                                                                    <  2:3526786/93‑1 (MQ=255)

    cAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAg                                                                                    <  2:4047406/93‑1 (MQ=255)

     aaTTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGt                                                                                   <  2:239569/93‑1 (MQ=255)

      aTTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTa                                                                                  <  1:2345614/93‑1 (MQ=255)

       ttGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAc                                                                                 <  1:15009/93‑1 (MQ=255)

       ttGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAc                                                                                 >  2:548716/1‑93 (MQ=255)

       ttGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAc                                                                                 <  2:4665272/93‑1 (MQ=255)

       ttGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAc                                                                                 >  1:3477268/1‑93 (MQ=255)

        tGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAcg                                                                                >  1:2559362/1‑93 (MQ=255)

         gATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAcgc                                                                               <  2:1908762/93‑1 (MQ=255)

         gATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAcgc                                                                               >  1:37327/1‑93 (MQ=255)

         gATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAcgc                                                                               <  1:4481908/93‑1 (MQ=255)

          aTGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTAcgcg                                                                              >  1:2937899/1‑93 (MQ=255)

           tGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGa                                                                             <  2:399113/93‑1 (MQ=255)

           tGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGa                                                                             <  2:3001640/93‑1 (MQ=255)

           tGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGa                                                                             <  2:3777316/93‑1 (MQ=255)

           tGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGa                                                                             <  2:53577/93‑1 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                            <  2:114720/93‑1 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                            <  1:1870526/93‑1 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                            <  1:4348496/93‑1 (MQ=255)

            gCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTGGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAg                                                                            <  2:4381251/93‑1 (MQ=255)

              tCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAggg                                                                          >  2:1206629/1‑93 (MQ=255)

              tCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAggg                                                                          >  2:2191222/1‑93 (MQ=255)

              tCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAggg                                                                          >  2:2211721/1‑93 (MQ=255)

               cGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGga                                                                         <  2:1435492/93‑1 (MQ=255)

                 cTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGgaga                                                                       >  1:4000540/1‑93 (MQ=255)

                  tGTTCACTACCAGGGGAATGCCATTTGCGGAGTCTTTACCGCCGAGGTTTCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                      <  2:1500227/93‑1 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                      >  1:3632284/1‑93 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                      <  1:3017346/93‑1 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                      <  1:1922900/93‑1 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                      <  1:983810/93‑1 (MQ=255)

                  tGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGaa                                                                      <  1:2190750/93‑1 (MQ=255)

                   gTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAAt                                                                     >  1:900357/1‑93 (MQ=255)

                   gTTCACTACCAGGGGAAGGCCATTTGCGGAGGCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAAt                                                                     >  1:2450231/1‑93 (MQ=255)

                    ttCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAAta                                                                    >  2:4555857/1‑92 (MQ=255)

                    ttCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATg                                                                    <  2:3326555/93‑1 (MQ=255)

                    ttCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATg                                                                    >  1:2180197/1‑93 (MQ=255)

                      cACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAg                                                                  >  1:3188957/1‑93 (MQ=255)

                       aCTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGc                                                                 >  1:1005432/1‑93 (MQ=255)

                        cTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCa                                                                <  1:845761/93‑1 (MQ=255)

                          aCCAGGGGAAGGCCATTTGCGGAGACTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGCACGCGAGGGAGAATGAGCATc                                                              >  1:1079529/1‑93 (MQ=255)

                            cAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGAGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCa                                                            >  2:2260077/1‑93 (MQ=255)

                             aGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGACCAAGTACGCGAGGGAGAATGAGCATCCAt                                                           >  1:1504772/1‑93 (MQ=255)

                             aGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCAt                                                           <  1:609565/93‑1 (MQ=255)

                              ggggAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCAtt                                                          >  1:523774/1‑93 (MQ=255)

                              ggggAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCAtt                                                          <  2:622870/93‑1 (MQ=255)

                               gggAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTg                                                         <  2:3317156/93‑1 (MQ=255)

                                ggAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGc                                                        <  2:87733/93‑1 (MQ=255)

                                  aaGTCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCtg                                                      <  2:4172117/93‑1 (MQ=255)

                                  aaGGCCATTTGCGGAGCCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGCATGAGCATCCAATGCtg                                                      >  2:4388141/1‑93 (MQ=255)

                                   aGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCtgt                                                     <  2:1267893/93‑1 (MQ=255)

                                      ccATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTa                                                  <  1:4402147/93‑1 (MQ=255)

                                       cATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTAc                                                 >  2:2383763/1‑93 (MQ=255)

                                       cATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTAc                                                 >  1:822332/1‑93 (MQ=255)

                                       cATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTAc                                                 <  1:4679263/93‑1 (MQ=255)

                                       cATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTAc                                                 <  1:1358464/93‑1 (MQ=255)

                                         tttGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGc                                               <  1:3942538/93‑1 (MQ=255)

                                              ggAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGaa                                          >  2:3401555/1‑93 (MQ=255)

                                              ggAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGaa                                          >  2:2874540/1‑93 (MQ=255)

                                                aGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGaaaa                                        <  1:1373694/93‑1 (MQ=255)

                                                 gTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGaaaaa                                       <  1:3902414/93‑1 (MQ=255)

                                                    tttACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGcc                                    >  2:314266/1‑93 (MQ=255)

                                                    tttACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGcc                                    <  1:267504/93‑1 (MQ=255)

                                                     ttACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCt                                   <  1:736521/93‑1 (MQ=255)

                                                       aCCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGa                                 >  2:4137160/1‑93 (MQ=255)

                                                        ccgccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGaa                                <  2:883375/93‑1 (MQ=255)

                                                        ccgccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGaa                                <  2:4622338/93‑1 (MQ=255)

                                                          gccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATg                              <  2:4195673/93‑1 (MQ=255)

                                                           ccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGc                             <  1:2003378/93‑1 (MQ=255)

                                                           ccgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGc                             <  1:2382915/93‑1 (MQ=255)

                                                            cgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCa                            <  2:2957257/93‑1 (MQ=255)

                                                            cgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCa                            <  2:4539036/93‑1 (MQ=255)

                                                            cgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCa                            <  1:2843074/93‑1 (MQ=255)

                                                            cgAGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCa                            <  1:4204921/93‑1 (MQ=255)

                                                              aGGTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAgg                          >  2:1273879/1‑93 (MQ=255)

                                                               ggTTGCAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGc                         >  1:3012979/1‑93 (MQ=255)

                                                                    cAGAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaa                    >  2:2058256/1‑93 (MQ=255)

                                                                      gAAACCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATaaaaa                  <  1:1327668/93‑1 (MQ=255)

                                                                        aaCCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAAtt                <  1:1927499/93‑1 (MQ=255)

                                                                        aaCCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAAtt                >  1:549868/1‑93 (MQ=255)

                                                                         aCCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTg               <  1:762868/93‑1 (MQ=255)

                                                                         aCCAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTg               >  2:1230964/1‑93 (MQ=255)

                                                                          ccAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTgg              <  2:2450231/93‑1 (MQ=255)

                                                                           cAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTggg             <  2:613654/93‑1 (MQ=255)

                                                                           cAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTggg             >  1:4134435/1‑93 (MQ=255)

                                                                           cAAAGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTggg             >  1:1883999/1‑93 (MQ=255)

                                                                            aaaGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTgggg            >  1:2132736/1‑93 (MQ=255)

                                                                            aaaGGGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTgggg            >  2:3663694/1‑93 (MQ=255)

                                                                             aaGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTggggg           <  2:335528/93‑1 (MQ=255)

                                                                              aGTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAGGCCTGAATGCAGGCATAAAAATTGGGGGa          <  1:1017113/93‑1 (MQ=255)

                                                                               gTGGCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAg         >  2:644654/1‑93 (MQ=255)

                                                                                 ggCGATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGt       <  1:4434505/93‑1 (MQ=255)

                                                                                    gATGGCGAGCAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGcc    <  2:3140939/93‑1 (MQ=255)

                                                                                    gATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGcc    >  2:4466433/1‑93 (MQ=255)

                                                                                    gATGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGcc    >  1:4462087/1‑93 (MQ=255)

                                                                                      tGGCGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTa  >  1:1536792/1‑93 (MQ=255)

AACGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGTGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGAATGCAGGCATAAAAATTGGGGGAGGTGCCTA  >  NC_000913/922309‑922487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`