BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	925,850	T→C	intergenic (‑184/+101)	infA ← / ← aat	protein chain initiation factor IF‑1/leucyl, phenylalanyl‑tRNA‑protein transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	925,850	0	T	C	100.0%	352.3 / NA	112	intergenic (‑184/+101)	infA/aat	protein chain initiation factor IF‑1/leucyl, phenylalanyl‑tRNA‑protein transferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (51/61); total (51/61)

Only 100 of 116 total aligned reads displayed.

AAACAGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGTTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGAAATGT  >  NC_000913/925760‑925939

aaacaGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTa                                                                                         >  2:135467/1‑93 (MQ=255)

aaacaGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTa                                                                                         >  1:1792294/1‑93 (MQ=255)

 aacaGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTAc                                                                                        <  1:330341/93‑1 (MQ=255)

 aacaGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTAc                                                                                        >  1:1472409/1‑93 (MQ=255)

   caGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCt                                                                                      <  1:3457241/93‑1 (MQ=255)

   caGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCt                                                                                      >  2:1430787/1‑93 (MQ=255)

     ggTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGa                                                                                    >  1:1957027/1‑93 (MQ=255)

      gTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGAc                                                                                   <  2:3965365/93‑1 (MQ=255)

          ggCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGa                                                                               >  1:4405460/1‑93 (MQ=255)

          ggCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGa                                                                               >  1:3253068/1‑93 (MQ=255)

           gCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGaa                                                                              <  2:2655168/93‑1 (MQ=255)

            cacaTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGaaa                                                                             >  1:89420/1‑93 (MQ=255)

            cacaTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGaaa                                                                             <  2:3947103/93‑1 (MQ=255)

             acaTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGaaaa                                                                            >  2:2819591/1‑93 (MQ=255)

              caTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGaaaaa                                                                           >  1:2357056/1‑93 (MQ=255)

               aTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAAt                                                                          >  1:763103/1‑93 (MQ=255)

               aTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAAt                                                                          >  2:3299573/1‑93 (MQ=255)

               aTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAAt                                                                          >  2:2164774/1‑93 (MQ=255)

               aTTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAAt                                                                          <  2:698192/93‑1 (MQ=255)

                  aCTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTct                                                                       >  1:3140323/1‑92 (MQ=255)

                    tCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCtt                                                                     >  2:2457637/1‑93 (MQ=255)

                     ccGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCTGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTa                                                                    <  2:2836970/93‑1 (MQ=255)

                     ccGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTa                                                                    >  2:605492/1‑93 (MQ=255)

                     ccGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTa                                                                    <  2:2189052/93‑1 (MQ=255)

                      cGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTAt                                                                   <  1:2436456/93‑1 (MQ=255)

                      cGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTAt                                                                   <  1:1735170/93‑1 (MQ=255)

                       gAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATc                                                                  <  1:1385346/93‑1 (MQ=255)

                        aaaaCACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCg                                                                 <  1:856236/93‑1 (MQ=255)

                        aaaaCACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCg                                                                 <  2:4307935/93‑1 (MQ=255)

                        aaaaCACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCg                                                                 >  2:278541/1‑93 (MQ=255)

                         aaaCACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCgg                                                                <  2:429392/93‑1 (MQ=255)

                           acacacGGCTAAGCCGCACCAAAAGCGCATCGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAACATTCATTATCCGCa                                                              >  2:4451855/1‑93 (MQ=255)

                             acacGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGc                                                            >  2:2626117/1‑93 (MQ=255)

                             acacGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACAATGGGCGCTACCTAACGCGAAAAATTCCTTATCGGCAgg                                                            >  1:3117118/1‑92 (MQ=255)

                              cacGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCg                                                           >  1:3369280/1‑93 (MQ=255)

                              cacGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCg                                                           >  2:4406747/1‑93 (MQ=255)

                                cgtcTAAGCCGCACCAAAAGCGCAGCTTATAAGGTAGCTGTGAGATAAACGATGGGCGCTCCCTGACGCGAAAAATTCCTTATCGGCAGCggg                                                         <  2:2579014/90‑1 (MQ=255)

                                cGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCggg                                                         <  2:1628680/93‑1 (MQ=255)

                                 ggCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCgggg                                                        <  1:1241377/93‑1 (MQ=255)

                                  gCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGt                                                       <  1:4241733/93‑1 (MQ=255)

                                   cTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTa                                                      <  2:511935/93‑1 (MQ=255)

                                    tAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTaa                                                     <  1:4475566/93‑1 (MQ=255)

                                    tAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTaa                                                     <  2:3596224/93‑1 (MQ=255)

                                    tAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTaa                                                     >  1:175149/1‑93 (MQ=255)

                                     aaGCCGCACCAAAAGTGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAAt                                                    <  2:3878418/93‑1 (MQ=255)

                                     aaGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAAt                                                    <  1:3628945/93‑1 (MQ=255)

                                      aGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATg                                                   <  1:785291/93‑1 (MQ=255)

                                      aGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATg                                                   >  2:874572/1‑93 (MQ=255)

                                      aGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATg                                                   >  1:1926058/1‑93 (MQ=255)

                                       gCCGCACCAAAAGCGCAACGTATAAGGGCGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGa                                                  >  2:2369283/1‑93 (MQ=255)

                                        ccGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAg                                                 <  1:2220553/93‑1 (MQ=255)

                                         cGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGc                                                <  2:3125697/93‑1 (MQ=255)

                                         cGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGc                                                >  2:3827964/1‑93 (MQ=255)

                                          gCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCg                                               >  1:396649/1‑93 (MQ=255)

                                            aCCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTa                                             >  2:387870/1‑93 (MQ=255)

                                            aCCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTa                                             >  1:1976320/1‑93 (MQ=255)

                                               aaaaGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAAcc                                          >  2:2914377/1‑93 (MQ=255)

                                                aaaGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCa                                         >  2:2536711/1‑93 (MQ=255)

                                                aaaGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCa                                         <  2:2082116/93‑1 (MQ=255)

                                                 aaGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCaa                                        <  1:1353167/93‑1 (MQ=255)

                                                    cgcAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAActc                                     <  1:4313303/93‑1 (MQ=255)

                                                     gcAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAActct                                    <  2:3565632/93‑1 (MQ=255)

                                                     gcAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAActct                                    <  2:1015544/93‑1 (MQ=255)

                                                          gTATAAGGGAGCGGTTAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGAc                               <  2:3599702/93‑1 (MQ=255)

                                                          gTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGAc                               <  2:873578/93‑1 (MQ=255)

                                                          gTATAAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGAc                               >  1:3960395/1‑93 (MQ=255)

                                                           tataAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGAcc                              <  1:2406066/93‑1 (MQ=255)

                                                             taAGGGAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGc                            >  1:1363043/1‑93 (MQ=255)

                                                                gggAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAAt                         <  2:3873294/93‑1 (MQ=255)

                                                                 ggAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAAtt                        <  1:141224/93‑1 (MQ=255)

                                                                 ggAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAAtt                        <  1:2309508/93‑1 (MQ=255)

                                                                  gAGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATta                       <  2:4270054/93‑1 (MQ=255)

                                                                   aGCGGTGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATtat                      <  2:4358197/93‑1 (MQ=255)

                                                                      ggTGAGATAAACGATGGGCGCTACCTGACGCGAAAACTTCCTTATCGGCAGTGGGGGAATTAGCGTAACCAACTCTGCGACCGGAATTATTac                   >  2:3058215/1‑93 (MQ=255)

                                                                        tGAGATAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAacac                 <  2:180776/93‑1 (MQ=255)

                                                                           gaTAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACActct              <  2:1958034/93‑1 (MQ=255)

                                                                           gaTAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACActct              <  2:3696958/93‑1 (MQ=255)

                                                                            aTAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTg             <  2:1473853/93‑1 (MQ=255)

                                                                            aTAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTg             <  1:2720143/93‑1 (MQ=255)

                                                                            aTAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTg             <  1:3211051/93‑1 (MQ=255)

                                                                             tAAACGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTgg            >  1:1829445/1‑93 (MQ=255)

                                                                             tAAACGATGGGCGCTACCTGACGCGAAAAATCCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTgg            >  2:1733771/1‑93 (MQ=255)

                                                                              aaaCGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTggg           <  2:2066372/93‑1 (MQ=255)

                                                                              aaaCGAGGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACCCTCTggg           <  2:3554234/93‑1 (MQ=255)

                                                                               aaCGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTgggg          >  1:3515381/1‑93 (MQ=255)

                                                                                aCGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGga         >  1:3262058/1‑93 (MQ=255)

                                                                                aCGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGga         <  2:1902191/93‑1 (MQ=255)

                                                                                aCGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGga         <  1:2292066/93‑1 (MQ=255)

                                                                                aCGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGga         <  1:4323221/93‑1 (MQ=255)

                                                                                 cGATGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGgag        >  1:1372143/1‑93 (MQ=255)

                                                                                   aTGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGaa      <  1:1671638/93‑1 (MQ=255)

                                                                                    tGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGaaa     >  1:3208904/1‑93 (MQ=255)

                                                                                    tGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGaaa     >  2:131970/1‑93 (MQ=255)

                                                                                    tGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGaaa     >  1:4343664/1‑93 (MQ=255)

                                                                                    tGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGaaa     <  2:821395/93‑1 (MQ=255)

                                                                                    tGGGCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGaaa     <  2:2747795/93‑1 (MQ=255)

                                                                                     gggCGCTACCTGACGCGAAATATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGAAAt    <  1:3128163/93‑1 (MQ=255)

                                                                                     gggCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGAAAt    >  1:4165398/1‑93 (MQ=255)

                                                                                     gggCGCTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGATAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGAAAt    <  1:333660/93‑1 (MQ=255)

                                                                                       gcgcTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGAAAtgt  <  1:908502/93‑1 (MQ=255)

AAACAGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAACGATGGGCGTTACCTGACGCGAAAAATTCCTTATCGGCAGCGGGGTAATGAGCGTAACCAACTCTGCGACCGCAATTATAACACTCTGGGGAGAAATGT  >  NC_000913/925760‑925939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`