BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	985,663	A→G	G181G (GGT→GGC)	ompF ←	outer membrane protein 1a

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	985,663	0	A	G	100.0%	450.5 / NA	144	G181G (GGT→GGC)	ompF	outer membrane protein 1a
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (67/77); total (67/77)

Only 100 of 147 total aligned reads displayed.

ACCAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTACCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCAAC  >  NC_000913/985573‑985752

aCCAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGcc                                                                                         >  2:2559527/1‑93 (MQ=255)

 ccAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTTccc                                                                                        >  2:1383221/1‑93 (MQ=255)

 ccAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGccc                                                                                        <  2:2332792/93‑1 (MQ=255)

  cAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCa                                                                                       >  2:565685/1‑93 (MQ=255)

   aaCGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAg                                                                                      >  2:2381279/1‑93 (MQ=255)

    aCGATACCAAAGCCTTCGTATTCGTATCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAgg                                                                                     <  2:2061166/93‑1 (MQ=255)

    aCGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAgg                                                                                     >  2:3552453/1‑93 (MQ=255)

     cGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGt                                                                                    <  1:573328/93‑1 (MQ=255)

      gATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCCGTGTCACGCTCGTTTTTGCCCAGGTa                                                                                   >  2:29228/1‑93 (MQ=255)

       aTACCAAAGCCTTTGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTAc                                                                                  <  2:1046874/93‑1 (MQ=255)

       aTACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTAc                                                                                  <  2:3642781/93‑1 (MQ=255)

       aTACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTAc                                                                                  <  2:3133841/93‑1 (MQ=255)

        tACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACt                                                                                 >  2:1013435/1‑93 (MQ=255)

         aCCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTg                                                                                >  1:830856/1‑93 (MQ=255)

          ccAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGa                                                                               >  2:549033/1‑93 (MQ=255)

           cAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGaa                                                                              >  2:3258977/1‑93 (MQ=255)

           cAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTACAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGaa                                                                              <  1:2519975/93‑1 (MQ=255)

            aaaGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAAc                                                                             >  2:3209327/1‑93 (MQ=255)

              aGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAg                                                                           >  1:4004564/1‑93 (MQ=255)

                ccTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCg                                                                         <  1:191544/93‑1 (MQ=255)

                 cTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGa                                                                        >  1:1870286/1‑93 (MQ=255)

                  ttcgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGaa                                                                       <  1:1882551/93‑1 (MQ=255)

                  ttcgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGaa                                                                       <  1:3336641/93‑1 (MQ=255)

                   tcgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAg                                                                      <  1:717653/93‑1 (MQ=255)

                    cgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGt                                                                     <  1:1123026/93‑1 (MQ=255)

                    cgtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGt                                                                     <  1:2452382/93‑1 (MQ=255)

                     gtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGtt                                                                    <  1:3152004/93‑1 (MQ=255)

                     gtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGtt                                                                    >  1:1909549/1‑93 (MQ=255)

                     gtattcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACACCGAAGtt                                                                    >  1:1801548/1‑93 (MQ=255)

                       attcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCa                                                                  >  1:4599681/1‑93 (MQ=255)

                         tcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAgg                                                                >  2:2062959/1‑93 (MQ=255)

                         tcgtaGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAgg                                                                >  2:1421699/1‑93 (MQ=255)

                           ggaGCTGATAGAACCGCCAACTCCGTCGCCGTTAGAACGGCGTCCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGcc                                                              <  1:1973871/91‑1 (MQ=255)

                             aGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCAt                                                            <  1:1728863/93‑1 (MQ=255)

                              gCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATc                                                           <  2:1542223/93‑1 (MQ=255)

                              gCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATc                                                           <  1:3957889/93‑1 (MQ=255)

                               cTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCTTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCa                                                          <  1:3388494/93‑1 (MQ=255)

                                 gATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAAc                                                        <  2:3120983/93‑1 (MQ=255)

                                   tAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCa                                                      >  2:3496494/1‑93 (MQ=255)

                                   tAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCa                                                      <  2:901157/93‑1 (MQ=255)

                                     gAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGa                                                    <  1:427683/93‑1 (MQ=255)

                                     gAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGa                                                    >  2:2412806/1‑93 (MQ=255)

                                     gAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGa                                                    >  2:3022006/1‑93 (MQ=255)

                                      aaCCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGAc                                                   >  1:565620/1‑93 (MQ=255)

                                        ccGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCa                                                 >  1:2848980/1‑93 (MQ=255)

                                        ccGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCa                                                 >  2:719700/1‑93 (MQ=255)

                                         cGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaa                                                <  1:561736/93‑1 (MQ=255)

                                         cGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaa                                                >  2:4144709/1‑93 (MQ=255)

                                         cGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaa                                                >  1:3976196/1‑93 (MQ=255)

                                         cGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaa                                                >  2:1160557/1‑93 (MQ=255)

                                          gCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaaa                                               <  1:58452/93‑1 (MQ=255)

                                          gCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaaa                                               >  1:4515857/1‑93 (MQ=255)

                                          gCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCATTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCaaa                                               >  1:4003189/1‑93 (MQ=255)

                                           ccAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaag                                              <  2:877108/93‑1 (MQ=255)

                                            cAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaaga                                             <  1:1610932/93‑1 (MQ=255)

                                              acacCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaagaag                                           <  1:1279490/93‑1 (MQ=255)

                                              acacCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaagaag                                           >  1:1424597/1‑93 (MQ=255)

                                              acacCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAaagaag                                           >  1:4393778/1‑93 (MQ=255)

                                              acacCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGACCATCAACCAGACCAaagaag                                           <  2:1875272/93‑1 (MQ=255)

                                              acacCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGATCAGGCCATCAACCAGACCAaagaag                                           >  2:2876706/1‑93 (MQ=255)

                                                cccGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGtt                                         <  1:1236341/92‑1 (MQ=255)

                                                 ccGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTg                                        >  1:2045959/1‑93 (MQ=255)

                                                 ccGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTg                                        >  1:1138073/1‑93 (MQ=255)

                                                   gTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGa                                      <  1:2227101/93‑1 (MQ=255)

                                                   gTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGa                                      <  1:1224019/93‑1 (MQ=255)

                                                    gcGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAg                                     <  2:2290362/92‑1 (MQ=255)

                                                     cGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGt                                    <  2:1760409/93‑1 (MQ=255)

                                                     cGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGt                                    >  1:4164483/1‑93 (MQ=255)

                                                       ccGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTa                                  <  2:2875473/93‑1 (MQ=255)

                                                          ttAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGa                               <  2:2990372/93‑1 (MQ=255)

                                                          ttAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGa                               >  2:3796427/1‑93 (MQ=255)

                                                          ttAGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGa                               >  1:1156769/1‑93 (MQ=255)

                                                            aGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATa                             <  2:4349671/93‑1 (MQ=255)

                                                            aGAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATa                             >  2:2291930/1‑93 (MQ=255)

                                                             gAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAg                            <  1:500257/93‑1 (MQ=255)

                                                             gAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAg                            >  1:2126655/1‑93 (MQ=255)

                                                             gAACGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAg                            <  2:401820/93‑1 (MQ=255)

                                                               aCGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGt                          <  2:1791155/93‑1 (MQ=255)

                                                               aCGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGt                          >  2:11446/1‑93 (MQ=255)

                                                               aCGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGt                          <  1:4200372/93‑1 (MQ=255)

                                                                cGGCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTa                         <  2:3365428/93‑1 (MQ=255)

                                                                 ggCGTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAg                        >  1:3243665/1‑93 (MQ=255)

                                                                    gTGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGACAGGTAGCaa                     >  1:1632851/1‑93 (MQ=255)

                                                                     tGCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAc                    >  2:2899378/1‑93 (MQ=255)

                                                                      gCAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAcg                   >  2:3195529/1‑93 (MQ=255)

                                                                       cAGTGTCACGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAAcgc                  <  1:3712052/93‑1 (MQ=255)

                                                                              aCGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAac           <  1:4084589/93‑1 (MQ=255)

                                                                              aCGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAac           >  2:1286139/1‑93 (MQ=255)

                                                                               cGCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACCCCGCCAaca          <  2:3755352/93‑1 (MQ=255)

                                                                                gCTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAacac         >  2:4028742/1‑93 (MQ=255)

                                                                                 cTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACg        <  2:1877582/93‑1 (MQ=255)

                                                                                 cTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACg        >  1:3371327/1‑93 (MQ=255)

                                                                                 cTCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCCCCAACACg        >  1:1977960/1‑93 (MQ=255)

                                                                                  tCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGa       >  1:2146073/1‑93 (MQ=255)

                                                                                  tCGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGa       >  1:3510460/1‑93 (MQ=255)

                                                                                   cGTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGAc      <  2:2680270/93‑1 (MQ=255)

                                                                                    gTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGAcc     >  1:70215/1‑93 (MQ=255)

                                                                                    gTTTTTGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGAcc     >  1:2801170/1‑93 (MQ=255)

                                                                                      ttttGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCaa   <  1:22997/93‑1 (MQ=255)

                                                                                       tttGCCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCAAc  <  2:869070/93‑1 (MQ=255)

ACCAACGATACCAAAGCCTTCGTATTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTACCCAGGTACTGAACAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCAAC  >  NC_000913/985573‑985752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`