BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	991,040	A→G	N399S (AAC→AGC)	pepN →	aminopeptidase N

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	991,040	0	A	G	100.0%	581.8 / NA	182	N399S (AAC→AGC)	pepN	aminopeptidase N
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (80/102); total (80/102)

Only 100 of 193 total aligned reads displayed.

TCATTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAACTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGT  >  NC_000913/990950‑991129

tCATTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCt                                                                                         <  1:2100224/93‑1 (MQ=255)

  aTTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTc                                                                                       <  2:637750/93‑1 (MQ=255)

  aTTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTc                                                                                       >  1:2881432/1‑93 (MQ=255)

  aTTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTc                                                                                       <  2:2432140/93‑1 (MQ=255)

    tGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCa                                                                                     <  1:471085/93‑1 (MQ=255)

       gaTGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGaa                                                                                  <  1:1474471/93‑1 (MQ=255)

        aTGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGaaa                                                                                 <  1:3222152/93‑1 (MQ=255)

        aTGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGaaa                                                                                 <  2:2593542/93‑1 (MQ=255)

        aTGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGaaa                                                                                 <  1:2750557/93‑1 (MQ=255)

         tGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAg                                                                                <  2:1073422/93‑1 (MQ=255)

         tGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAg                                                                                <  1:1477101/93‑1 (MQ=255)

         tGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAg                                                                                <  1:2524467/93‑1 (MQ=255)

          gAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAgg                                                                               <  1:4457968/93‑1 (MQ=255)

          gAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAgg                                                                               >  1:2953230/1‑93 (MQ=255)

          gAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAgg                                                                               >  2:1087329/1‑93 (MQ=255)

            acaacTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACATCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGa                                                                             >  2:4064611/1‑93 (MQ=255)

            acaacTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGa                                                                             <  1:2021835/93‑1 (MQ=255)

              aacTTCCACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATg                                                                           <  2:3698104/93‑1 (MQ=255)

               acTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGc                                                                          <  1:2319003/93‑1 (MQ=255)

                cTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCa                                                                         <  1:179912/93‑1 (MQ=255)

                cTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCa                                                                         <  2:3412634/93‑1 (MQ=255)

                cTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCa                                                                         >  2:1908831/1‑93 (MQ=255)

                 ttCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAg                                                                        >  2:3245601/1‑93 (MQ=255)

                 ttCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAg                                                                        >  1:1837540/1‑93 (MQ=255)

                   cTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCt                                                                      >  1:2081647/1‑93 (MQ=255)

                      cacCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTa                                                                   <  2:663262/93‑1 (MQ=255)

                      cacCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTa                                                                   <  2:4445671/93‑1 (MQ=255)

                      cacCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTa                                                                   <  1:3692190/93‑1 (MQ=255)

                      cacCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTa                                                                   <  1:1903480/93‑1 (MQ=255)

                       ccccTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTAt                                                                  <  2:2464229/92‑1 (MQ=255)

                       acCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTAt                                                                  >  2:1956189/1‑93 (MQ=255)

                          cTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTc                                                               <  2:3632526/93‑1 (MQ=255)

                           tGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCg                                                              >  1:2826121/1‑93 (MQ=255)

                            gACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGa                                                             <  2:2914421/93‑1 (MQ=255)

                            gACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGa                                                             >  2:579590/1‑93 (MQ=255)

                            gACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGa                                                             >  1:3956415/1‑93 (MQ=255)

                              ccGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGc                                                           >  1:1122621/1‑93 (MQ=255)

                               cGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCg                                                          >  2:4280031/1‑93 (MQ=255)

                                gTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGt                                                         <  2:2081003/93‑1 (MQ=255)

                                 tttACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTc                                                        >  2:1268596/1‑93 (MQ=255)

                                 tttACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTc                                                        >  2:1998267/1‑93 (MQ=255)

                                 tttACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTc                                                        >  1:1295627/1‑93 (MQ=255)

                                  ttACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGTAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCa                                                       <  1:3386319/93‑1 (MQ=255)

                                   tACGAGAAGAGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCat                                                      <  2:3763883/93‑1 (MQ=255)

                                      gagaAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCatgat                                                   >  1:2271/1‑93 (MQ=255)

                                       agaAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCatgatg                                                  >  1:3637260/1‑93 (MQ=255)

                                       agaAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCatgatg                                                  <  1:3475627/93‑1 (MQ=255)

                                          aGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTa                                               <  1:2251215/93‑1 (MQ=255)

                                           gggCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAg                                              <  1:263205/93‑1 (MQ=255)

                                             gcgcGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTg                                            <  1:254543/93‑1 (MQ=255)

                                              cgcgGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGAAGCTTTATTTCGAGCGTCATGATGGTAGTGc                                           >  2:755252/1‑93 (MQ=255)

                                               gcgGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCa                                          <  2:1522542/93‑1 (MQ=255)

                                                cgGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAg                                         <  2:2190848/93‑1 (MQ=255)

                                                  gAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCg                                       >  2:4268010/1‑93 (MQ=255)

                                                   aaGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGa                                      <  1:960978/93‑1 (MQ=255)

                                                     gTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGAcc                                    >  2:4633305/1‑93 (MQ=255)

                                                       gATTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCtg                                  >  1:1620669/1‑93 (MQ=255)

                                                        aTTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCtgt                                 <  1:4281647/93‑1 (MQ=255)

                                                        aTTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCtgt                                 >  1:3404271/1‑93 (MQ=255)

                                                        aTTCGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCtgt                                 <  2:2858347/93‑1 (MQ=255)

                                                           cGCATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTgac                              <  1:1026548/93‑1 (MQ=255)

                                                             cATGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTgacga                            >  1:694431/1‑93 (MQ=255)

                                                              aTGATCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTgacgac                           <  2:3307258/93‑1 (MQ=255)

                                                                 aTCCACCCCCTCGTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACttt                        <  2:1301949/93‑1 (MQ=255)

                                                                 aTCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACttt                        <  1:4157424/93‑1 (MQ=255)

                                                                 aTCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACttt                        <  1:3147696/93‑1 (MQ=255)

                                                                  tCCACACCCTGCTTGGCGAATAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTtg                       <  1:4592937/93‑1 (MQ=255)

                                                                  tCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTtg                       <  1:1383487/93‑1 (MQ=255)

                                                                  tCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTtg                       >  2:1005169/1‑93 (MQ=255)

                                                                  tCCACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTtg                       <  2:2633932/93‑1 (MQ=255)

                                                                   ccACACCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTAGAGCGTCATGATGGTCGTGCACCGACCTGTGACGCCtttca                      >  1:3101035/1‑91 (MQ=255)

                                                                    cacaCCCTGCTTGGCGAAGAAAGCTTCCAGACAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGACGCGACCTGTGACGACTTtgtg                     >  2:394573/1‑93 (MQ=255)

                                                                    cacaCCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTtgtg                     >  2:349855/1‑93 (MQ=255)

                                                                     acacCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGc                    >  2:4171920/1‑93 (MQ=255)

                                                                       acCCTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAg                  >  1:3057999/1‑93 (MQ=255)

                                                                          cTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTTGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCg               >  1:4334208/1‑93 (MQ=255)

                                                                          cTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCg               >  1:700269/1‑93 (MQ=255)

                                                                          cTGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCg               >  1:16842/1‑93 (MQ=255)

                                                                           tGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGa              >  2:548996/1‑93 (MQ=255)

                                                                           tGCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGa              >  2:1292035/1‑93 (MQ=255)

                                                                            gCTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGAt             <  1:2435667/93‑1 (MQ=255)

                                                                             cTTGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATg            <  1:105542/93‑1 (MQ=255)

                                                                              ttGGCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATgg           >  2:4230639/1‑93 (MQ=255)

                                                                                ggCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGaa         <  2:1360685/93‑1 (MQ=255)

                                                                                ggCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGaa         <  1:583134/93‑1 (MQ=255)

                                                                                 gCGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAg        >  1:1599575/1‑93 (MQ=255)

                                                                                  cGAAGAAAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGa       <  1:950531/93‑1 (MQ=255)

                                                                                   gaagaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGAt      <  2:453797/93‑1 (MQ=255)

                                                                                   gaagaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGAt      <  1:556063/93‑1 (MQ=255)

                                                                                    aagaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATg     <  1:3911356/93‑1 (MQ=255)

                                                                                    aagaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATg     >  1:367744/1‑93 (MQ=255)

                                                                                     agaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGc    <  2:829384/93‑1 (MQ=255)

                                                                                     agaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGc    >  2:1630079/1‑93 (MQ=255)

                                                                                     agaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGc    >  1:3267648/1‑93 (MQ=255)

                                                                                      gaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCg   >  2:3519837/1‑93 (MQ=255)

                                                                                      gaaAGCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCg   <  1:2718569/93‑1 (MQ=255)

                                                                                      gaaAGCTTCCAGAAAGGGATGCAGATTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCg   >  2:2288417/1‑93 (MQ=255)

                                                                                       aaagCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGt  <  2:3021915/93‑1 (MQ=255)

                                                                                       aaagCTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGt  >  2:2516469/1‑93 (MQ=255)

                                                                                       aaagCTTCCAGAAAGGGATGCAGCTTTATTTCGAGAGTCATGATGGTAGTGCAGCGACCTGCGACGACTTTGTGCAGGCGATGGAAGATGCgg  >  2:4509550/1‑92 (MQ=255)

TCATTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAACTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGT  >  NC_000913/990950‑991129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`