BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	996,684	A→G	S18P (TCC→CCC)	ycbP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	996,684	0	A	G	100.0%	314.2 / NA	101	S18P (TCC→CCC)	ycbP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (33/68); total (33/68)

Only 100 of 106 total aligned reads displayed.

GTAGATCTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGAGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTAAC  >  NC_000913/996594‑996773

gTAGATCTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGc                                                                                         <  1:1368740/93‑1 (MQ=255)

gTAGATCTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGc                                                                                         <  2:3032278/93‑1 (MQ=255)

gTAGATCTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGc                                                                                         <  2:2997594/93‑1 (MQ=255)

 tAGATCTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCt                                                                                        >  1:913289/1‑93 (MQ=255)

   gATCTTCGGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTgg                                                                                      >  1:666842/1‑93 (MQ=255)

     tCTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAg                                                                                    >  1:2833805/1‑93 (MQ=255)

      cTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGc                                                                                   <  2:567300/93‑1 (MQ=255)

       ttCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCg                                                                                  <  1:3124934/93‑1 (MQ=255)

       ttCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCg                                                                                  >  2:1289782/1‑93 (MQ=255)

        tCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCga                                                                                 <  2:532546/93‑1 (MQ=255)

         ccGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCgag                                                                                <  1:2179602/93‑1 (MQ=255)

           ggggCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGaa                                                                              <  2:1451586/93‑1 (MQ=255)

               cGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGaa                                                                          <  1:626769/93‑1 (MQ=255)

                gAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGaaa                                                                         >  1:1700960/1‑93 (MQ=255)

                gAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGaaa                                                                         >  1:216365/1‑93 (MQ=255)

                 aaGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAg                                                                        >  1:4267517/1‑93 (MQ=255)

                 aaGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAg                                                                        <  1:2687201/93‑1 (MQ=255)

                 aaGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAg                                                                        >  1:4146362/1‑93 (MQ=255)

                  aGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGc                                                                       <  1:3339135/93‑1 (MQ=255)

                    tgttGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGa                                                                     <  2:3771236/91‑1 (MQ=255)

                        gCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGTCTGGAGCGAGAAGGAAAGCGAGGAc                                                                 <  2:2066355/93‑1 (MQ=255)

                           gATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTAc                                                              >  1:133558/1‑93 (MQ=255)

                            gttCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAATGAGCTGGAGCGAGAAGGAAAGCGAGTACTaac                                                             >  2:3740630/2‑91 (MQ=255)

                            aTTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTAcc                                                             <  1:360929/93‑1 (MQ=255)

                            aTTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTAcc                                                             <  1:4540881/93‑1 (MQ=255)

                             ttCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTAccc                                                            <  2:793301/93‑1 (MQ=255)

                             ttCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTAccc                                                            >  2:4361815/1‑93 (MQ=255)

                             ttCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTAccc                                                            >  1:1837870/1‑93 (MQ=255)

                                 aGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCa                                                        <  1:4474886/93‑1 (MQ=255)

                                  gTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAg                                                       <  2:1912069/93‑1 (MQ=255)

                                  gTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAg                                                       <  1:803716/93‑1 (MQ=255)

                                    gATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAggg                                                     >  2:2394979/1‑93 (MQ=255)

                                      tAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtg                                                   >  1:2718531/1‑93 (MQ=255)

                                      tAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtg                                                   >  2:2899491/1‑93 (MQ=255)

                                      tAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtg                                                   >  2:4327716/1‑93 (MQ=255)

                                      tAAACCTCTACATCCAGGCCATTTAGTTTTGCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtg                                                   <  1:2494993/93‑1 (MQ=255)

                                       aaaCCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtga                                                  >  1:154889/1‑93 (MQ=255)

                                        aaCCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtgat                                                 >  2:695922/1‑93 (MQ=255)

                                        aaCCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtgat                                                 <  1:1539483/93‑1 (MQ=255)

                                         aCCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGtgatg                                                >  1:1537581/1‑93 (MQ=255)

                                           ctctACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGac                                              >  1:237552/1‑93 (MQ=255)

                                           ctctACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGac                                              >  2:3043688/1‑93 (MQ=255)

                                           ctctACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGac                                              <  2:2292454/93‑1 (MQ=255)

                                            tctACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGaca                                             >  2:3270953/1‑93 (MQ=255)

                                             ctACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGacac                                            <  2:3319125/93‑1 (MQ=255)

                                              tACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACg                                           >  1:3771789/1‑93 (MQ=255)

                                                 aTCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCAt                                        >  1:2652156/1‑93 (MQ=255)

                                                  tCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATa                                       <  1:2970000/93‑1 (MQ=255)

                                                   ccAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATAc                                      <  1:4340856/93‑1 (MQ=255)

                                                   ccAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATAc                                      <  1:744242/93‑1 (MQ=255)

                                                   ccAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATAc                                      >  1:2968905/1‑93 (MQ=255)

                                                    cAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATAct                                     >  2:513837/1‑93 (MQ=255)

                                                    cAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATAct                                     <  1:917917/93‑1 (MQ=255)

                                                    cAGGCCATTTAGTTTTTCCCGCGCATATGCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATAct                                     <  1:3752737/93‑1 (MQ=255)

                                                     aGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATActc                                    <  2:1765686/93‑1 (MQ=255)

                                                       gCCATTTAGTTTTTCCCGCGCATGTTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATActctc                                  >  2:959298/1‑93 (MQ=255)

                                                       gCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATActctc                                  <  1:3196411/93‑1 (MQ=255)

                                                        ccATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATActctct                                 <  2:2111550/93‑1 (MQ=255)

                                                        ccATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATActctct                                 <  1:1509430/93‑1 (MQ=255)

                                                         cATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACtctctc                                <  2:3590249/93‑1 (MQ=255)

                                                         cATTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACtctctc                                <  1:575660/93‑1 (MQ=255)

                                                          aTTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTcc                               <  2:3289546/93‑1 (MQ=255)

                                                          aTTTAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTcc                               >  1:3148486/1‑93 (MQ=255)

                                                           tttAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCt                              >  2:226410/1‑93 (MQ=255)

                                                           tttAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCt                              <  1:687864/93‑1 (MQ=255)

                                                           tttAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCt                              <  2:3018785/93‑1 (MQ=255)

                                                             tAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATGCTCTCTCCTta                            <  2:2388188/93‑1 (MQ=255)

                                                             tAGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTta                            <  2:688913/93‑1 (MQ=255)

                                                              aGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTtat                           <  2:3468046/93‑1 (MQ=255)

                                                              aGTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTtat                           <  1:2610334/93‑1 (MQ=255)

                                                               gTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTtata                          <  1:2503189/93‑1 (MQ=255)

                                                               gTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTtata                          <  1:1444518/93‑1 (MQ=255)

                                                               gTTTTTCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTtata                          <  2:2666091/93‑1 (MQ=255)

                                                                 ttttCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAAc                        <  2:3479903/93‑1 (MQ=255)

                                                                   ttCCCGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCa                      <  1:2333027/93‑1 (MQ=255)

                                                                      ccGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAAtt                   <  2:1725468/93‑1 (MQ=255)

                                                                      ccGCGCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAAtt                   <  1:1946961/93‑1 (MQ=255)

                                                                       cgcgCATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTg                  <  2:2796745/93‑1 (MQ=255)

                                                                          gcATATTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTc               <  1:2745793/93‑1 (MQ=255)

                                                                            atatTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCtt             <  1:2554288/93‑1 (MQ=255)

                                                                            atatTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCtt             <  1:217565/93‑1 (MQ=255)

                                                                             tatTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttt            >  2:2504739/1‑93 (MQ=255)

                                                                             tatTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttt            >  1:1456681/1‑93 (MQ=255)

                                                                             tatTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttt            <  2:2945692/93‑1 (MQ=255)

                                                                             tatTCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttt            >  2:4207815/1‑93 (MQ=255)

                                                                               ttCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttttt          <  2:2236027/93‑1 (MQ=255)

                                                                               ttCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttttt          <  2:2540064/93‑1 (MQ=255)

                                                                               ttCCAGCAAGGGGCGAGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttttt          <  2:3450786/93‑1 (MQ=255)

                                                                                tCCAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCtttttt         <  1:3431900/93‑1 (MQ=255)

                                                                                 ccAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttttttt        <  1:1769519/93‑1 (MQ=255)

                                                                                 ccAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttttttt        <  2:663797/93‑1 (MQ=255)

                                                                                 ccAGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCttttttt        <  2:1457636/93‑1 (MQ=255)

                                                                                   aGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGt      <  2:2741758/93‑1 (MQ=255)

                                                                                   aGCAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGt      <  2:4648584/93‑1 (MQ=255)

                                                                                     cAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTa    <  2:331632/93‑1 (MQ=255)

                                                                                     cAAGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTa    <  1:4002994/93‑1 (MQ=255)

                                                                                      aaGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTaa   <  2:2041485/93‑1 (MQ=255)

                                                                                      aaGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTaa   <  1:4524836/93‑1 (MQ=255)

                                                                                       aGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTAAc  <  2:1327770/93‑1 (MQ=255)

                                                                                       aGGGGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTAAc  <  1:4481197/93‑1 (MQ=255)

GTAGATCTTCCGGGGCGAAGTTTTGCAGATTCCAGTGATAAACCTCTACATCCAGGCCATTTAGTTTTTCCCGCGCATATTCCAGCAAGGAGCTGGAGCGAGAAGGAAAGCGAGGACTACCCGCCAGGGTGATGACACGCATACTCTCTCCTTATAACCAATTGTTCTTTTTTTGTTAAC  >  NC_000913/996594‑996773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`