BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	88,471	C→T	D148D (GAC→GAT)	fruR →	FruR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	88,471	0	C	T	100.0%	760.9 / NA	208	D148D (GAC→GAT)	fruR	FruR
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (108/100); total (108/100)

Only 100 of 219 total aligned reads displayed.

GATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGACCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGTTTCC  >  NC_000913/88382‑88560

gATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATcgc                                                                                        >  2:4354665/1‑93 (MQ=255)

gATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATcgc                                                                                        <  2:4269749/93‑1 (MQ=255)

gATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATcgc                                                                                        <  2:1307496/93‑1 (MQ=255)

gATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATcgc                                                                                        <  2:2147825/93‑1 (MQ=255)

 aTGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATcgcg                                                                                       >  1:2372151/1‑93 (MQ=255)

    gcATAATTGTTTCGACGTCGTTGCCTCCTGAGCATCGTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGccc                                                                                    <  2:573944/92‑1 (MQ=255)

    ccATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGccc                                                                                    <  2:3375821/93‑1 (MQ=255)

     cATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCt                                                                                   <  2:2867878/93‑1 (MQ=255)

     cATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCt                                                                                   >  2:1871108/1‑93 (MQ=255)

     cATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGGTCCCGATTGGCGCGCTGGATCGCGCCCt                                                                                   >  2:2243784/1‑93 (MQ=255)

      attattGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTc                                                                                  >  1:2915087/1‑93 (MQ=255)

      attaatGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTc                                                                                  >  2:885389/1‑93 (MQ=255)

       ttattGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCg                                                                                 >  1:1635823/1‑93 (MQ=255)

        tattGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGa                                                                                >  1:3943674/1‑93 (MQ=255)

        tattGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGa                                                                                <  1:33542/93‑1 (MQ=255)

        tattGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGa                                                                                >  1:3079155/1‑93 (MQ=255)

            gTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGt                                                                            <  2:842673/93‑1 (MQ=255)

              ttCGACGTCATTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGa                                                                          <  2:3975560/93‑1 (MQ=255)

                 gACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAaca                                                                       <  1:1632937/93‑1 (MQ=255)

                  aCGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAacac                                                                      >  2:4423189/1‑93 (MQ=255)

                  aCGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAacac                                                                      >  1:1407019/1‑93 (MQ=255)

                  aCGTCGTTGCATCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAacac                                                                      <  2:1994631/93‑1 (MQ=255)

                    gtcgtTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAGCACtt                                                                    >  1:87327/1‑93 (MQ=255)

                    gtcgtTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACtt                                                                    >  1:2419735/1‑93 (MQ=255)

                    ctcgtTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACtt                                                                    <  2:3145912/92‑1 (MQ=255)

                     tcgtTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTc                                                                   >  2:1510064/1‑93 (MQ=255)

                     tcgtTGCCTCCTGAGCATCCTTTTTATCAACGCCGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTc                                                                   >  2:243493/1‑93 (MQ=255)

                      cgtTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCa                                                                  >  1:368070/1‑93 (MQ=255)

                       gtTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCAc                                                                 >  1:529211/1‑93 (MQ=255)

                       gtTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGCTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGCGAACACTTctc                                                                 >  1:3511907/1‑91 (MQ=255)

                        ttGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCAcc                                                                <  2:449878/93‑1 (MQ=255)

                        ttGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCAcc                                                                >  1:2741707/1‑93 (MQ=255)

                        ttGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCAcc                                                                >  1:1553375/1‑93 (MQ=255)

                         tGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCa                                                               >  1:3550490/1‑93 (MQ=255)

                          gCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAg                                                              <  2:964010/93‑1 (MQ=255)

                           cctcctGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGc                                                             >  1:4397204/1‑93 (MQ=255)

                               ctGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtgg                                                         <  2:2993613/93‑1 (MQ=255)

                                tGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtggt                                                        >  1:1566239/1‑93 (MQ=255)

                                tGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtggt                                                        >  1:830462/1‑93 (MQ=255)

                                tGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtggt                                                        <  2:2293800/93‑1 (MQ=255)

                                 gAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtggtt                                                       <  2:3527097/93‑1 (MQ=255)

                                 gAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGGTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtggtg                                                       >  2:3047648/1‑92 (MQ=255)

                                    cATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtggttggt                                                    >  1:750786/1‑93 (MQ=255)

                                    cATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGtggttggt                                                    >  2:275443/1‑93 (MQ=255)

                                     aTCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTg                                                   >  2:2706368/1‑93 (MQ=255)

                                     aTCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTg                                                   >  1:375717/1‑93 (MQ=255)

                                       ccTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGcc                                                 >  2:1560078/1‑93 (MQ=255)

                                         tttttATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGa                                               >  1:2401177/1‑93 (MQ=255)

                                         tttttATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGa                                               >  2:656455/1‑93 (MQ=255)

                                         tttttATCAACGCTGGGCTAACGACCCGTTCCCGACTGTCGCGCTGGATCGCGCCCCCGATCGAGCACACTTCACCAGCGTGGTTGGTGCCGa                                               >  2:3612810/1‑93 (MQ=255)

                                          ttttATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGAt                                              >  2:4014999/1‑93 (MQ=255)

                                            ttATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCa                                            <  2:2102261/93‑1 (MQ=255)

                                             tATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAg                                           <  1:174258/93‑1 (MQ=255)

                                              aTCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAgg                                          >  1:2175919/1‑93 (MQ=255)

                                               tCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGga                                         <  2:4114241/93‑1 (MQ=255)

                                                cAACGCTGGGCTAACGACCCGTTCCCGATTGTCAACCTGGATCCCGCCCTCGATCGTGCACACTTCACCAGGCTGGTTAGTGGCGATCAGgac                                        >  2:722856/1‑92 (MQ=255)

                                                 aaCGCTGGGCTAACGACCCGTTTCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGggtg                                       >  2:2484026/1‑93 (MQ=255)

                                                   cGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGgatgat                                     <  2:3734373/93‑1 (MQ=255)

                                                    gCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGatgatg                                    <  2:2788839/93‑1 (MQ=255)

                                                    gCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGatgatg                                    <  1:4065751/93‑1 (MQ=255)

                                                     cTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGc                                   <  2:3424126/93‑1 (MQ=255)

                                                      tGGGCTAACGGCCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGcc                                  <  1:717832/93‑1 (MQ=255)

                                                       gggCTAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCg                                 >  1:3593210/1‑93 (MQ=255)

                                                           tAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAAt                             <  2:1807820/93‑1 (MQ=255)

                                                           tAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAAt                             <  1:1539523/93‑1 (MQ=255)

                                                           tAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAAt                             >  1:2241969/1‑93 (MQ=255)

                                                           tAACGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAAt                             <  2:4648246/93‑1 (MQ=255)

                                                           tAACCACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAAt                             <  1:3317025/93‑1 (MQ=255)

                                                              cGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCt                          <  1:2037309/93‑1 (MQ=255)

                                                              cGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCt                          <  2:1171517/93‑1 (MQ=255)

                                                              cGACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCt                          <  1:2972529/93‑1 (MQ=255)

                                                               gACCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTg                         >  2:1831441/1‑93 (MQ=255)

                                                               gACCCGTTCCCAATCGCCGCGCTGGATCGCGGCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCCGGATGATGCCTAAATGCTg                         <  2:4576716/93‑1 (MQ=255)

                                                                aCCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTgg                        >  2:1366579/1‑93 (MQ=255)

                                                                aCCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTgg                        >  1:1242319/1‑93 (MQ=255)

                                                                aCCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTgg                        >  1:3842216/1‑93 (MQ=255)

                                                                aCCCGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTgg                        >  2:1649520/1‑93 (MQ=255)

                                                                 cccGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTggg                       >  1:4110/1‑92 (MQ=255)

                                                                   cGTTCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGCTGGTGCCGATCAGGATGATGCCGAAATGCTGGCgg                     >  1:3711737/1‑93 (MQ=255)

                                                                     ttCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGaa                   <  2:3867479/93‑1 (MQ=255)

                                                                     ttCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGaa                   >  2:1128243/1‑93 (MQ=255)

                                                                     ttCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGaa                   >  2:2520832/1‑93 (MQ=255)

                                                                      tCCCGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGATATGCTGGCGGAag                  >  1:1115281/1‑93 (MQ=255)

                                                                       cccGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAaga                 <  2:3034795/93‑1 (MQ=255)

                                                                       cccGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAaga                 <  1:1522907/93‑1 (MQ=255)

                                                                       cccGATTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAaga                 <  2:810069/93‑1 (MQ=255)

                                                                           aTTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGTGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTa             >  2:636861/1‑93 (MQ=255)

                                                                           aTTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTa             <  1:2522707/93‑1 (MQ=255)

                                                                           aTTGTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTa             >  1:4546020/1‑93 (MQ=255)

                                                                            ttGTCTCGCTGGATCGCGCCCTCGATCGTGAACACTTCTCCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTAc            <  1:2333661/93‑1 (MQ=255)

                                                                              gTCGCGCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGt          >  2:4217063/1‑93 (MQ=255)

                                                                                cgcgCTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTaa        <  1:4447141/93‑1 (MQ=255)

                                                                                 gcgcTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAg       <  2:876559/93‑1 (MQ=255)

                                                                                  cgcTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGt      <  2:3331115/93‑1 (MQ=255)

                                                                                   gcTGGATCGCGGCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGtt     <  1:2303668/93‑1 (MQ=255)

                                                                                   gcTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGtt     <  2:2532577/93‑1 (MQ=255)

                                                                                   gcTGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGtt     >  1:1993597/1‑93 (MQ=255)

                                                                                     tGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGTTTc   >  1:3009279/1‑93 (MQ=255)

                                                                                     tGGATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGTTTc   <  1:2537395/93‑1 (MQ=255)

                                                                                      ggATCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGTTTcc  <  1:1663186/93‑1 (MQ=255)

GATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGACCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGTTTCC  >  NC_000913/88382‑88560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`