BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,009,201	T→C	S5S (AGT→AGC)	uup →	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,009,201	0	T	C	100.0%	506.3 / NA	157	S5S (AGT→AGC)	uup	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (79/78); total (79/78)

Only 100 of 162 total aligned reads displayed.

GCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGT  >  NC_000913/1009112‑1009290

gCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATg                                                                                        >  1:2271080/1‑93 (MQ=255)

  tctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgca                                                                                      <  2:1541255/93‑1 (MQ=255)

  tctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgca                                                                                      <  1:760163/93‑1 (MQ=255)

  tctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgca                                                                                      >  2:322824/1‑93 (MQ=255)

   ctcCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAgcatgcat                                                                                     <  2:1339406/93‑1 (MQ=255)

     cgcAGGATTTCGCCAGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatgg                                                                                   <  2:2281287/91‑1 (MQ=255)

     cccAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatgg                                                                                   <  1:4500018/93‑1 (MQ=255)

      ccAGGATTGCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggc                                                                                  <  2:1649701/93‑1 (MQ=255)

       cAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcg                                                                                 >  2:2916132/1‑93 (MQ=255)

        aGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgc                                                                                >  1:910645/1‑93 (MQ=255)

        aGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgc                                                                                >  2:63789/1‑93 (MQ=255)

         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               >  1:3327548/1‑93 (MQ=255)

         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               >  1:2829322/1‑93 (MQ=255)

         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               >  1:2758072/1‑93 (MQ=255)

         ggATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgca                                                                               >  1:791468/1‑93 (MQ=255)

           aTTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatg                                                                             >  2:2208085/1‑93 (MQ=255)

           aTTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatg                                                                             <  2:1776552/93‑1 (MQ=255)

            tttCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatgg                                                                            >  1:1495486/1‑93 (MQ=255)

            tttCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATgcatggcgcatgg                                                                            >  1:268319/1‑93 (MQ=255)

                gCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGt                                                                        <  2:1458515/93‑1 (MQ=255)

                  ccGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCg                                                                      >  2:227563/1‑93 (MQ=255)

                  ccGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCg                                                                      >  1:4237491/1‑93 (MQ=255)

                    gTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGtt                                                                    >  2:274375/1‑93 (MQ=255)

                    gTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGtt                                                                    <  1:807441/93‑1 (MQ=255)

                    gTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGtt                                                                    >  2:4622326/1‑93 (MQ=255)

                      aaCCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCa                                                                  <  1:2302074/93‑1 (MQ=255)

                          gCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGa                                                              <  1:388921/93‑1 (MQ=255)

                             aGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGAcgc                                                           <  1:176967/93‑1 (MQ=255)

                               aTCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACgcgc                                                         >  1:3432431/1‑93 (MQ=255)

                                tCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgcc                                                        >  1:2882019/1‑93 (MQ=255)

                                tCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgcc                                                        >  2:3204662/1‑93 (MQ=255)

                                 ccACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgccc                                                       >  1:752774/1‑92 (MQ=255)

                                  cacaACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgccgc                                                      <  1:2478930/93‑1 (MQ=255)

                                  cacaACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgccgc                                                      >  1:1629696/1‑93 (MQ=255)

                                  cacaACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGcgccgc                                                      >  2:4205934/1‑93 (MQ=255)

                                     aaCTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTtc                                                   <  1:2055309/93‑1 (MQ=255)

                                      aCTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTtct                                                  <  2:3524630/93‑1 (MQ=255)

                                       ctgctgGCTGATTACCTCAGCCTTTAAGGAATAGTAATGTCACTCATGATCATGCATTACGCCTGGCTGCCGTTAGCCGAAGCGCCGCTtctc                                                 >  2:75515/1‑93 (MQ=255)

                                       ctgctgGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTtctc                                                 <  2:941597/93‑1 (MQ=255)

                                       ctgctgGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTtctc                                                 <  2:647503/93‑1 (MQ=255)

                                        tgctgGCTGATTACAGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCg                                                >  2:2864351/1‑93 (MQ=255)

                                         gctggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGa                                               <  1:453494/93‑1 (MQ=255)

                                          ctggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGAt                                              <  2:4659969/93‑1 (MQ=255)

                                           tggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATa                                             >  1:1545135/1‑93 (MQ=255)

                                           tggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATa                                             <  1:4554107/93‑1 (MQ=255)

                                           tggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATa                                             >  2:705562/1‑93 (MQ=255)

                                            ggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATaa                                            <  1:1973270/93‑1 (MQ=255)

                                            ggctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATaa                                            <  1:2715065/93‑1 (MQ=255)

                                             gctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAAc                                           <  2:2461679/93‑1 (MQ=255)

                                             gctgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAAc                                           <  1:3125361/93‑1 (MQ=255)

                                               tgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGc                                         >  2:2996743/1‑93 (MQ=255)

                                               tgATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGc                                         <  1:216300/93‑1 (MQ=255)

                                                gATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCa                                        <  1:2943053/93‑1 (MQ=255)

                                                gATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCa                                        >  2:4043624/1‑93 (MQ=255)

                                                   tACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGaa                                     <  2:3808789/93‑1 (MQ=255)

                                                     ccGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACt                                   >  2:1037323/1‑93 (MQ=255)

                                                     ccGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACt                                   <  1:1282640/93‑1 (MQ=255)

                                                      cGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTg                                  >  1:1735343/1‑93 (MQ=255)

                                                       gCAGCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGc                                 >  2:4415184/1‑93 (MQ=255)

                                                          gCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCata                              >  2:4012858/1‑93 (MQ=255)

                                                          gCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCata                              <  2:2172355/93‑1 (MQ=255)

                                                          gCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCata                              <  1:38400/93‑1 (MQ=255)

                                                          gCCTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCata                              <  2:4483561/93‑1 (MQ=255)

                                                           ccTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCatat                             <  1:508407/93‑1 (MQ=255)

                                                           ccTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCatat                             <  1:4184494/93‑1 (MQ=255)

                                                           ccTGAAAGGAAGAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCatat                             <  2:1806262/93‑1 (MQ=255)

                                                            cTGAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATc                            <  1:435195/93‑1 (MQ=255)

                                                              gAAAGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGa                          >  2:2743243/1‑93 (MQ=255)

                                                                aaGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAg                        <  2:3536812/93‑1 (MQ=255)

                                                                aaGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAg                        <  2:4305279/93‑1 (MQ=255)

                                                                 aGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGa                       >  1:1515671/1‑93 (MQ=255)

                                                                 aGGAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGa                       >  2:1171176/1‑93 (MQ=255)

                                                                   gAATAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATa                     <  2:1561435/93‑1 (MQ=255)

                                                                    aaTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaa                    <  1:1037508/93‑1 (MQ=255)

                                                                     aTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaac                   >  1:4037204/1‑93 (MQ=255)

                                                                     aTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaac                   >  1:3612327/1‑93 (MQ=255)

                                                                     aTAGTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaac                   >  1:124041/1‑93 (MQ=255)

                                                                      tAGTAATGTCATTAATCAGCATGCATGGCCCATGGGCGTCGTTCAGCGACGCGCCCCTTCTCGATAAGGCAGGACAGCATAATGACCATaacg                  >  2:3946330/1‑93 (MQ=255)

                                                                        gTAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaa                <  1:4311234/93‑1 (MQ=255)

                                                                        atAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaa                <  1:222938/92‑1 (MQ=255)

                                                                         tAATGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaac               <  1:1010380/93‑1 (MQ=255)

                                                                          aaTGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATaacgaacg              >  1:2139926/1‑93 (MQ=255)

                                                                           aTGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgt             <  2:2583801/93‑1 (MQ=255)

                                                                           aTGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgt             >  1:4464230/1‑93 (MQ=255)

                                                                           aTGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCACCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgt             <  2:2049751/93‑1 (MQ=255)

                                                                            tGTCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgtg            >  2:3665674/1‑93 (MQ=255)

                                                                             gTCATTAATCAGCATGCAGGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACgtgt           <  2:1418159/93‑1 (MQ=255)

                                                                              tCATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGtt          >  1:1142755/1‑93 (MQ=255)

                                                                              tCATTAATCAGCATGCATGGCGCAAGGCTGTTGTTCAGGGACCCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGtt          <  2:3861976/93‑1 (MQ=255)

                                                                               cATTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGttt         <  2:2335425/93‑1 (MQ=255)

                                                                                aTTAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGCGTTTg        >  1:1125323/1‑93 (MQ=255)

                                                                                 ttAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGt       <  1:3173903/93‑1 (MQ=255)

                                                                                  tAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTc      <  1:3480661/93‑1 (MQ=255)

                                                                                  tAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTc      >  1:4510382/1‑93 (MQ=255)

                                                                                  tAATCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTc      <  2:791468/93‑1 (MQ=255)

                                                                                  tAATCAGCATGCATGGCGCATGGCGGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTc      <  2:4243308/93‑1 (MQ=255)

                                                                                     tCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCtgg   >  2:2430368/1‑93 (MQ=255)

                                                                                     tCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCtgg   >  1:2107230/1‑93 (MQ=255)

                                                                                     tCAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCtgg   >  1:3016704/1‑93 (MQ=255)

                                                                                      cAGCATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCtggt  <  2:4429453/93‑1 (MQ=255)

GCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGAAAGGAATAGTAATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGT  >  NC_000913/1009112‑1009290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`