BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,053,401	T→C	A657A (GCA→GCG)	torS ←	TorS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,053,401	0	T	C	100.0%	361.8 / NA	117	A657A (GCA→GCG)	torS	TorS
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (68/49); total (68/49)

Only 100 of 122 total aligned reads displayed.

GTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTG  >  NC_000913/1053312‑1053490

gTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGcc                                                                                        >  2:1983915/1‑93 (MQ=255)

  aaTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCgg                                                                                      >  2:3871119/1‑92 (MQ=255)

  aaTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGt                                                                                      <  2:4680515/93‑1 (MQ=255)

   aTTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTg                                                                                     <  2:1565001/93‑1 (MQ=255)

      cGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCTGTGGCa                                                                                  >  1:3497066/1‑93 (MQ=255)

        cTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAac                                                                                <  2:2099993/93‑1 (MQ=255)

         tGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAaca                                                                               >  2:54457/1‑93 (MQ=255)

          gggTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAacac                                                                              <  2:418010/93‑1 (MQ=255)

           ggTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACg                                                                             >  1:766833/1‑93 (MQ=255)

           ggTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACg                                                                             >  1:2755482/1‑93 (MQ=255)

           ggTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACg                                                                             >  1:2430556/1‑93 (MQ=255)

           ggTTAGCAGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACg                                                                             >  2:2159300/1‑93 (MQ=255)

            gTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGt                                                                            >  1:3429321/1‑93 (MQ=255)

             ttAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTa                                                                           <  1:1573147/93‑1 (MQ=255)

              tAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTaa                                                                          <  2:4213412/93‑1 (MQ=255)

               aGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAc                                                                         <  2:47337/93‑1 (MQ=255)

               aGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAAc                                                                         <  2:1666158/93‑1 (MQ=255)

                gCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACg                                                                        <  2:397737/93‑1 (MQ=255)

                   ggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCa                                                                     >  2:4615047/1‑93 (MQ=255)

                   ggTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCa                                                                     >  1:4310166/1‑93 (MQ=255)

                    gTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACTGCaa                                                                    >  2:2639851/1‑93 (MQ=255)

                    gTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCaa                                                                    <  1:439348/93‑1 (MQ=255)

                     ttATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAg                                                                   >  1:2378398/1‑93 (MQ=255)

                      tATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAgg                                                                  >  2:336834/1‑92 (MQ=255)

                      tATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGc                                                                  >  2:1796813/1‑93 (MQ=255)

                      tATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGc                                                                  <  1:1076918/93‑1 (MQ=255)

                      tATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGc                                                                  >  1:2525141/1‑93 (MQ=255)

                      tATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGc                                                                  >  1:2648556/1‑93 (MQ=255)

                        tCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGt                                                                >  1:3129213/1‑93 (MQ=255)

                        tCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGt                                                                >  2:1868255/1‑93 (MQ=255)

                        tCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGt                                                                >  2:3389211/1‑93 (MQ=255)

                         cTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTa                                                               >  2:1112034/1‑93 (MQ=255)

                          ttCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTaa                                                              <  1:2255746/93‑1 (MQ=255)

                           tCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTaaa                                                             <  1:540861/93‑1 (MQ=255)

                              aTTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaa                                                          >  1:4261624/1‑93 (MQ=255)

                              aTTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGAAACGGCAAACGTAAACaa                                                          >  1:2399268/1‑93 (MQ=255)

                               ttAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaa                                                         >  2:1473274/1‑93 (MQ=255)

                                tAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaa                                                        >  2:85997/1‑93 (MQ=255)

                                 aaCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACaaaaa                                                       <  2:367165/93‑1 (MQ=255)

                                  aCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAc                                                      >  2:2919081/1‑93 (MQ=255)

                                  aCAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAAc                                                      >  2:1146923/1‑93 (MQ=255)

                                   cAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGTAACACGTAACGGCAAGCGTAAACAAAAACa                                                     <  2:2761856/93‑1 (MQ=255)

                                     gCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGc                                                   <  1:3043047/93‑1 (MQ=255)

                                      cAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTAGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCt                                                  >  1:3302015/1‑93 (MQ=255)

                                       aaaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCtt                                                 >  2:1899877/1‑93 (MQ=255)

                                       aaaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCtt                                                 >  2:214515/1‑93 (MQ=255)

                                       aaaCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCtt                                                 <  1:926636/93‑1 (MQ=255)

                                         aCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTcc                                               >  1:3627388/1‑93 (MQ=255)

                                         aCGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTcc                                               <  1:1300233/93‑1 (MQ=255)

                                            tAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAc                                            <  2:1916690/93‑1 (MQ=255)

                                            tAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAAc                                            <  2:3876339/93‑1 (MQ=255)

                                              aaCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCt                                          >  2:1129351/1‑93 (MQ=255)

                                               aCCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGTCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACATCTTCCAACCTc                                         >  1:555651/1‑93 (MQ=255)

                                                ccGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTcc                                        <  2:3994487/93‑1 (MQ=255)

                                                ccGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTcc                                        <  1:4333126/93‑1 (MQ=255)

                                                ccGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTcc                                        >  1:3357126/1‑93 (MQ=255)

                                                 cGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCg                                       <  2:3877717/93‑1 (MQ=255)

                                                  gTCAAGACGCACCGCCTGGTTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCgg                                      >  1:190275/1‑93 (MQ=255)

                                                  gTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCgc                                      >  1:3045225/1‑92 (MQ=255)

                                                   tCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGc                                     >  1:1235373/1‑93 (MQ=255)

                                                   tCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGc                                     >  1:1536969/1‑93 (MQ=255)

                                                     aaGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGt                                   <  2:714653/93‑1 (MQ=255)

                                                     aaGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGt                                   <  1:4430471/93‑1 (MQ=255)

                                                      aGACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTg                                  >  1:88852/1‑93 (MQ=255)

                                                       gACGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGc                                 <  2:1127453/93‑1 (MQ=255)

                                                        aCGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCt                                <  1:1240995/93‑1 (MQ=255)

                                                         cGCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTCACGGCAAGCGGAAACAAAAACAGCTTCCAACCTCCGGCGTGCtg                               >  2:1620237/1‑93 (MQ=255)

                                                          gCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtgg                              <  2:1126942/93‑1 (MQ=255)

                                                          gCACCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtgg                              >  1:2144455/1‑93 (MQ=255)

                                                            cccGCCTGATTGACTGTTTTTGGCACGGGCTCCTTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtggtg                            <  2:1932076/92‑1 (MQ=255)

                                                            aCCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtggtg                            <  2:891623/93‑1 (MQ=255)

                                                            aCCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtggtg                            >  1:3265978/1‑93 (MQ=255)

                                                            aCCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtggtg                            >  2:3674295/1‑93 (MQ=255)

                                                            aCCGCCTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCtggtg                            <  1:35738/93‑1 (MQ=255)

                                                                ccTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGgcgc                        >  2:695948/1‑93 (MQ=255)

                                                                 cTGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCt                       <  1:654437/93‑1 (MQ=255)

                                                                  tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTc                      >  1:1441012/1‑93 (MQ=255)

                                                                  tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTc                      >  1:4918/1‑93 (MQ=255)

                                                                  tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTc                      >  1:1263402/1‑93 (MQ=255)

                                                                  tGATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTc                      >  1:4661939/1‑93 (MQ=255)

                                                                   taTTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCa                     <  2:2148333/92‑1 (MQ=255)

                                                                   gATTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCa                     <  1:3966385/93‑1 (MQ=255)

                                                                    aTTGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAg                    <  1:391040/93‑1 (MQ=255)

                                                                     ttGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGt                   >  2:3679213/1‑93 (MQ=255)

                                                                     ttGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGt                   >  1:2289909/1‑93 (MQ=255)

                                                                      tGACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGtt                  <  2:469305/93‑1 (MQ=255)

                                                                       gACTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTc                 >  2:3486719/1‑93 (MQ=255)

                                                                        aCTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcg                >  1:1906330/1‑93 (MQ=255)

                                                                        aCTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcg                <  2:342775/93‑1 (MQ=255)

                                                                         cTGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgc               <  1:3916125/93‑1 (MQ=255)

                                                                          tGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgcc              <  1:707674/93‑1 (MQ=255)

                                                                          tGTTTTTGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgcc              >  2:3088881/1‑93 (MQ=255)

                                                                            tttttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTcgccgc            >  1:2541465/1‑93 (MQ=255)

                                                                             ttttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCgccgcc           >  2:3320187/1‑93 (MQ=255)

                                                                              tttGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGccc          <  1:1403109/93‑1 (MQ=255)

                                                                                tGGCACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCAt        <  1:1729358/93‑1 (MQ=255)

                                                                                   cACGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGc     >  2:4636807/1‑93 (MQ=255)

                                                                                    aCGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGcc    >  2:619798/1‑93 (MQ=255)

                                                                                     cGGGCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCt   <  2:2650688/93‑1 (MQ=255)

                                                                                      gggCGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTg  <  1:1344915/93‑1 (MQ=255)

GTAATTCGCTGGGTTAGCGGGTTATCTTCAATTAACAGCAAACGTAAACCGTCAAGACGCACCGCCTGATTGACTGTTTTTGGCACGGGTGCCGTGGCAACACGTAACGGCAAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTG  >  NC_000913/1053312‑1053490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`