BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,068,946	G→A	H39H (CAC→CAT)	ycdG ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,068,946	0	G	A	100.0%	427.6 / NA	117	H39H (CAC→CAT)	ycdG	putative transport protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (84/33); total (84/33)

Only 100 of 128 total aligned reads displayed.

CGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACT  >  NC_000913/1068856‑1069034

cGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCatg                                                                                        <  2:4562451/93‑1 (MQ=255)

 gTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCatgt                                                                                       >  2:2473180/1‑93 (MQ=255)

   gCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTg                                                                                     >  1:630621/1‑93 (MQ=255)

      gATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAAc                                                                                  >  1:1026844/1‑93 (MQ=255)

      gATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAAc                                                                                  <  1:3904127/93‑1 (MQ=255)

      gATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAAc                                                                                  <  1:3135795/93‑1 (MQ=255)

       agcgccGACATTAAAAGGGAAGGATTGGGATCCAGCCCCATCAGAATCGGCAGTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACg                                                                                 <  1:2211637/89‑1 (MQ=255)

       aTCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACg                                                                                 >  2:4093314/1‑93 (MQ=255)

          cccGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGccc                                                                              <  2:2402759/93‑1 (MQ=255)

          cccGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGccc                                                                              >  1:1299875/1‑93 (MQ=255)

           ccGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCa                                                                             <  2:4671480/93‑1 (MQ=255)

           ccGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCa                                                                             >  1:4641916/1‑93 (MQ=255)

           ccGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCa                                                                             >  2:564179/1‑93 (MQ=255)

            cGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCAt                                                                            <  1:586793/93‑1 (MQ=255)

             gACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCAtt                                                                           >  2:577992/1‑93 (MQ=255)

              aCATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTa                                                                          >  1:4509834/1‑93 (MQ=255)

                aTTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACt                                                                        >  2:4052921/1‑93 (MQ=255)

                aTTAAAATGCAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCCTCGCGCCAAACATCGCCACCGCATGTCGAACGCCCATTACt                                                                        >  2:3294536/1‑93 (MQ=255)

                   aaaaTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGcc                                                                     >  1:3457252/1‑93 (MQ=255)

                    aaaTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCg                                                                    >  1:1209761/1‑93 (MQ=255)

                      aTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTc                                                                  >  1:2415212/1‑93 (MQ=255)

                      aTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTc                                                                  >  1:2649114/1‑93 (MQ=255)

                        ggAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTg                                                                >  2:691747/1‑93 (MQ=255)

                        ggAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTg                                                                >  2:3135571/1‑93 (MQ=255)

                         gAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGa                                                               >  1:3142468/1‑93 (MQ=255)

                         gAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGa                                                               >  2:1127779/1‑93 (MQ=255)

                         gAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGa                                                               <  2:190985/93‑1 (MQ=255)

                          aaaGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAg                                                              >  2:3799747/1‑93 (MQ=255)

                           aaGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGc                                                             <  2:374648/93‑1 (MQ=255)

                            aGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCa                                                            <  1:3280819/93‑1 (MQ=255)

                            aGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCa                                                            >  2:4506964/1‑93 (MQ=255)

                            aGATTGGGATCCAGCACCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTG‑CGTCTGAGCaa                                                           >  1:3490197/1‑93 (MQ=255)

                             gATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCaa                                                           >  1:1810863/1‑93 (MQ=255)

                             gATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCaa                                                           <  1:196998/93‑1 (MQ=255)

                              aTTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCaaa                                                          <  1:2001350/93‑1 (MQ=255)

                              aTTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCaaa                                                          >  1:1794271/1‑93 (MQ=255)

                               ttGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAAc                                                         <  1:379946/93‑1 (MQ=255)

                               ttGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAAc                                                         <  1:918817/93‑1 (MQ=255)

                               ttGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAAc                                                         >  1:2536252/1‑93 (MQ=255)

                               ttGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAAc                                                         >  2:3521539/1‑93 (MQ=255)

                                tGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACg                                                        >  2:2400106/1‑93 (MQ=255)

                                 gggATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACgg                                                       <  1:2338781/93‑1 (MQ=255)

                                 gggATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACgg                                                       >  1:633908/1‑93 (MQ=255)

                                 gggATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACgg                                                       >  1:4057787/1‑93 (MQ=255)

                                  ggATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGc                                                      <  2:1666028/93‑1 (MQ=255)

                                    aTCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCaa                                                    <  1:3481395/93‑1 (MQ=255)

                                     tCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAAt                                                   >  1:1842998/1‑93 (MQ=255)

                                     tCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAAt                                                   <  2:2531155/93‑1 (MQ=255)

                                     tCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAAt                                                   <  2:4277146/93‑1 (MQ=255)

                                     tCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAAt                                                   >  1:2172226/1‑93 (MQ=255)

                                      ccAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATc                                                  <  2:2639440/93‑1 (MQ=255)

                                        aGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGt                                                <  2:618807/93‑1 (MQ=255)

                                        aGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGt                                                >  2:2641938/1‑93 (MQ=255)

                                        aGCCCCATCAGAATCGCCATTAACACCGTCGCGCCAACCATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGt                                                <  2:2958326/93‑1 (MQ=255)

                                         gCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGtt                                               >  1:3186850/1‑93 (MQ=255)

                                         gCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGtt                                               >  2:1510285/1‑93 (MQ=255)

                                         gCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGtt                                               >  1:707274/1‑93 (MQ=255)

                                         gCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGtc                                               >  1:521413/1‑92 (MQ=255)

                                          ccccATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTc                                              <  1:4084095/93‑1 (MQ=255)

                                          ccccATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTc                                              >  1:2486389/1‑93 (MQ=255)

                                           cccATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCa                                             <  1:3748743/93‑1 (MQ=255)

                                             cATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATc                                           >  2:380889/1‑93 (MQ=255)

                                             cATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATc                                           >  1:149508/1‑93 (MQ=255)

                                               tCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCg                                         >  2:3175799/1‑93 (MQ=255)

                                                cAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCgg                                        >  1:1147792/1‑93 (MQ=255)

                                                 aGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGgc                                       >  2:3857598/1‑93 (MQ=255)

                                                 aGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGgc                                       <  2:4034250/93‑1 (MQ=255)

                                                    aTCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGcgcg                                    >  1:707841/1‑93 (MQ=255)

                                                     tCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGa                                   <  1:3070304/93‑1 (MQ=255)

                                                     tCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGa                                   >  2:3229161/1‑93 (MQ=255)

                                                      cGGCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGAc                                  <  2:723088/93‑1 (MQ=255)

                                                       ggCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGAcc                                 >  2:3487377/1‑93 (MQ=255)

                                                       ggCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGCCGCGccc                                 >  2:42749/1‑93 (MQ=255)

                                                        gCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCa                                <  2:4631641/93‑1 (MQ=255)

                                                        gCATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCa                                <  1:4019682/93‑1 (MQ=255)

                                                         cATTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCAc                               <  2:2139614/93‑1 (MQ=255)

                                                          aTTAACACCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCAcg                              >  1:2000497/1‑93 (MQ=255)

                                                              acacCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCAcgccgc                          >  1:4443710/1‑93 (MQ=255)

                                                              acacCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCAcgccgc                          >  1:3655766/1‑93 (MQ=255)

                                                               cacCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGct                         >  1:1390443/1‑93 (MQ=255)

                                                                cccGTCCCGCCAAACATCGCCGCCCTTTGTAAACCCCCTATTATTCCGGTCTGAGAAAACGGAAATCTTTCATCGGGCGCGCCCACGCCGctc                        <  2:3274249/92‑1 (MQ=255)

                                                                acCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGctc                        >  1:1071622/1‑93 (MQ=255)

                                                                acCGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGctc                        >  2:3622575/1‑93 (MQ=255)

                                                                 ccGTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGctct                       >  1:2293311/1‑93 (MQ=255)

                                                                   gTCGCGCCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGctctct                     >  2:2209068/1‑93 (MQ=255)

                                                                      ccgcAAAACACCCCCCCCGCATGTGAAACGCCCATTACTGCCGTCAGAACAAACGGCAATCGTCCACCCGGCGCGCCCACGCCGCTCTCTGTa                  <  2:4276132/92‑1 (MQ=255)

                                                                        gcCAAACATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTaga                >  1:3760096/1‑93 (MQ=255)

                                                                           aaaCATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGt             >  2:2936880/1‑93 (MQ=255)

                                                                           aaaCATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGt             >  1:2839435/1‑93 (MQ=255)

                                                                           aaaCATCCCCCCCTCATTTTGAACGCCCTTTACGCCCGTGTGAGAAAACGGCAATCGTTCATCCGCCGCCCCCACGCCGCTCTCTGTAGAGGt             <  2:498742/93‑1 (MQ=255)

                                                                            aaCATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTc            >  2:4153411/1‑93 (MQ=255)

                                                                            aaCACCCCCACCGCATTTTAAACGCCCATTCCTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGCCCACGCCGCTCTCTGTAGAGGTc            <  2:1193704/93‑1 (MQ=255)

                                                                             aCATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCg           >  2:1352369/1‑93 (MQ=255)

                                                                             aCATCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCg           >  2:1123539/1‑93 (MQ=255)

                                                                                tCGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGAtt        >  1:1358922/1‑93 (MQ=255)

                                                                                gcGCCCCCGCATGTTGAACGCCTATTACTGCCGTCTGAGCAAACGGAAATCGTCCACCCGGCGCGCCCACGCCGCTCTCTGTAGAGGTCGAtt        <  2:2205876/92‑1 (MQ=255)

                                                                                 cGCCACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGAttt       >  2:2401780/1‑93 (MQ=255)

                                                                                    cACCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTaa    >  2:3614181/1‑93 (MQ=255)

                                                                                     aCCGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTaat   >  1:2942047/1‑92 (MQ=255)

                                                                                      ccGCATGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACt  >  2:2115102/1‑93 (MQ=255)

CGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGTTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACT  >  NC_000913/1068856‑1069034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`