BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,088,752	A→G	V110A (GTG→GCG)	ycdR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,088,752	0	A	G	99.2%	363.6 / NA	117	V110A (GTG→GCG)	ycdR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (70/46); minor base T (0/1); total (70/47)
Fisher's exact test for biased strand distribution p-value = 4.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 118 total aligned reads displayed.

GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC  >  NC_000913/1088664‑1088841

gggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTAc                                                                                       >  1:3562822/1‑93 (MQ=255)

 ggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACa                                                                                      <  2:128630/93‑1 (MQ=255)

 ggggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACa                                                                                      >  2:391080/1‑93 (MQ=255)

  gggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAg                                                                                     <  1:4080735/93‑1 (MQ=255)

  gggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAg                                                                                     >  2:1885339/1‑93 (MQ=255)

  gggCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAg                                                                                     >  1:2590478/1‑93 (MQ=255)

    gCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCt                                                                                   <  1:4442830/93‑1 (MQ=255)

      ccATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttt                                                                                 >  1:4499089/1‑93 (MQ=255)

      ccATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttt                                                                                 <  2:2290565/93‑1 (MQ=255)

       cATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCtttt                                                                                >  1:2689835/1‑93 (MQ=255)

       cATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCtttt                                                                                <  1:2459026/93‑1 (MQ=255)

        aTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttttt                                                                               >  1:566213/1‑93 (MQ=255)

        aTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttttt                                                                               <  1:1311817/93‑1 (MQ=255)

        aTACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCttttt                                                                               >  2:4302312/1‑93 (MQ=255)

         tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  2:2621073/1‑93 (MQ=255)

         tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  2:2747308/1‑93 (MQ=255)

         tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  1:1042168/1‑93 (MQ=255)

         tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTc                                                                              >  1:4661791/1‑93 (MQ=255)

         tACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGATTTTTc                                                                              >  1:1857467/1‑93 (MQ=255)

             gcagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGt                                                                          >  1:936708/1‑93 (MQ=255)

             gcagGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGt                                                                          <  1:1135039/93‑1 (MQ=255)

                ggCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGc                                                                       <  2:4115407/93‑1 (MQ=255)

                 gCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCg                                                                      >  1:746287/1‑93 (MQ=255)

                 gCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCg                                                                      >  2:470913/1‑93 (MQ=255)

                    aCTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGtt                                                                   >  2:112761/1‑93 (MQ=255)

                      tGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGtttt                                                                 >  2:4191201/1‑93 (MQ=255)

                       ggAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtc                                                                <  2:646820/93‑1 (MQ=255)

                       ggAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtc                                                                >  2:1912432/1‑93 (MQ=255)

                       ggAAGGCCTGAAGAATTGGGAAGAAGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACGGCTTTTTTCGGTCGCGGtgttt                                                                >  2:3250559/1‑92 (MQ=255)

                        gAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcc                                                               >  2:292043/1‑93 (MQ=255)

                        gAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcc                                                               >  2:4363369/1‑93 (MQ=255)

                        gAAGACCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcc                                                               <  2:3171452/93‑1 (MQ=255)

                          aGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTtcctc                                                             >  1:3526986/1‑93 (MQ=255)

                             ccTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCctcctc                                                          <  2:2809988/93‑1 (MQ=255)

                              cTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCg                                                         >  2:4396839/1‑93 (MQ=255)

                               tGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCACAAGTCAGCGCTACAGCTCTTTCCGGTAGCGGTTTTCCTCCTCGa                                                        >  2:64676/1‑93 (MQ=255)

                               tGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGa                                                        >  1:1133574/1‑93 (MQ=255)

                                 aagaaTTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGAtg                                                      <  1:1287289/93‑1 (MQ=255)

                                      ttGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCtt                                                 <  1:1395973/93‑1 (MQ=255)

                                      ttGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCtt                                                 >  1:4584773/1‑93 (MQ=255)

                                      ttGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCtt                                                 <  1:2150021/93‑1 (MQ=255)

                                        gggAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCa                                               <  1:3396324/93‑1 (MQ=255)

                                         ggAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCAc                                              <  1:1466811/93‑1 (MQ=255)

                                         ggAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCAc                                              >  2:175228/1‑93 (MQ=255)

                                         ggAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCAc                                              >  1:3048990/1‑93 (MQ=255)

                                          gAAGACGCGGGTATAAAAACTCTGGTAGGCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACg                                             >  1:2124385/1‑93 (MQ=255)

                                               cgcgGGTATAAAAACTCTGGTGGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAAttt                                        >  2:2982722/1‑93 (MQ=255)

                                                 cgGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGa                                      <  1:382282/93‑1 (MQ=255)

                                                   ggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGc                                    >  2:3175732/1‑93 (MQ=255)

                                                   ggTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGc                                    >  1:4018773/1‑93 (MQ=255)

                                                    gTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCa                                   >  1:3783242/1‑93 (MQ=255)

                                                     tataAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCaa                                  <  2:2413081/93‑1 (MQ=255)

                                                      ataAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAAt                                 >  2:3851740/1‑93 (MQ=255)

                                                      ataAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAAt                                 <  1:1782667/93‑1 (MQ=255)

                                                      ataAAAACTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAAt                                 >  1:3405226/1‑93 (MQ=255)

                                                        aaaaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATAc                               >  1:1979661/1‑93 (MQ=255)

                                                         aaaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACt                              <  2:574673/93‑1 (MQ=255)

                                                          aaaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTg                             >  1:1028076/1‑93 (MQ=255)

                                                           acccctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGa                            <  1:818360/89‑1 (MQ=255)

                                                           aaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGa                            <  1:679275/93‑1 (MQ=255)

                                                           aaCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGa                            >  1:2598493/1‑93 (MQ=255)

                                                            aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc                           >  2:1051386/1‑93 (MQ=255)

                                                            aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc                           >  2:465952/1‑93 (MQ=255)

                                                            aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc                           >  2:4457093/1‑93 (MQ=255)

                                                            aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc                           <  1:2921457/93‑1 (MQ=255)

                                                            aCTCTGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAc                           <  2:3654804/93‑1 (MQ=255)

                                                             ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc                          >  1:1011125/1‑93 (MQ=255)

                                                             ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc                          <  1:2765446/93‑1 (MQ=255)

                                                             ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc                          >  1:2429552/1‑93 (MQ=255)

                                                             ctctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAcc                          <  1:46939/93‑1 (MQ=255)

                                                              tctGGTAGCCGTCATCAAAAGTCAGCTCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCg                         <  2:3793325/93‑1 (MQ=255)

                                                              tctGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCg                         <  1:1521165/93‑1 (MQ=255)

                                                                tGGTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGt                       >  1:3608180/1‑93 (MQ=255)

                                                                 ggTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGtt                      <  1:1950548/93‑1 (MQ=255)

                                                                 ggTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGtt                      <  2:3294707/93‑1 (MQ=255)

                                                                 ggTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGtt                      <  2:3338563/93‑1 (MQ=255)

                                                                 ggTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGtt                      <  2:428487/93‑1 (MQ=255)

                                                                  gTAGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTg                     >  1:3085162/1‑93 (MQ=255)

                                                                    aGCCGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGAt                   <  1:3568938/93‑1 (MQ=255)

                                                                      ccGTCATCAAAAGTCAGCGTTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATaa                 >  2:4542226/1‑93 (MQ=255)

                                                                      ccGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATaa                 <  1:3981298/93‑1 (MQ=255)

                                                                       cGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGAGCGGTTGATAAc                <  1:4050342/93‑1 (MQ=255)

                                                                       cGTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAc                <  1:2457003/93‑1 (MQ=255)

                                                                        gTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAcc               >  1:1746425/1‑93 (MQ=255)

                                                                        gTCATCAAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAAcc               >  1:282314/1‑93 (MQ=255)

                                                                         tcatcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCg              >  2:4540771/1‑93 (MQ=255)

                                                                           atcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGtt            >  1:4229090/1‑93 (MQ=255)

                                                                           atcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGtt            >  1:1464044/1‑93 (MQ=255)

                                                                            tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc           >  1:1102911/1‑93 (MQ=255)

                                                                            tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc           <  1:568089/93‑1 (MQ=255)

                                                                            tcaAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtc           >  2:172437/1‑93 (MQ=255)

                                                                             caAAAGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtct          <  2:3081277/93‑1 (MQ=255)

                                                                             caAAAGTCAGCGCTACAGCTGTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtct          <  2:1058536/93‑1 (MQ=255)

                                                                              aaaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTtctc         >  2:3749323/1‑93 (MQ=255)

                                                                               aaaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcg        <  1:3887046/93‑1 (MQ=255)

                                                                                aaGTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTcgc       >  2:4608131/1‑93 (MQ=255)

                                                                                  gTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCgcgc     >  2:1622648/1‑93 (MQ=255)

                                                                                  gTCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCgcgc     >  2:556884/1‑93 (MQ=255)

                                                                                   tCAGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAGTTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCa    >  2:1638893/1‑93 (MQ=255)

                                                                                     aGCGCTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGc  >  1:2309235/1‑93 (MQ=255)

GGGGGCCCATACAGCAGGCCACTGGAAGGCCTGAAGAATTGGGAAGACGCGGGTATAAAAACTCTGGTAGCCGTCATCAAAAGTCAGCACTACAGCTTTTTCCGGTAGCGGTTTTCCTCCTCGATGTGCTTCACGAATTTGAGCAATACTGACCGGTTGATAACCGTTCTCGCGCAGC  >  NC_000913/1088664‑1088841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`