BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,091,304	T→C	D70G (GAC→GGC)	ycdS ←	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,091,304	0	T	C	100.0%	422.3 / NA	131	D70G (GAC→GGC)	ycdS	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/67); total (64/67)

Only 100 of 137 total aligned reads displayed.

CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAT  >  NC_000913/1091214‑1091393

ccACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCa                                                                                         <  2:2164847/93‑1 (MQ=255)

    gcgcTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCaa                                                                                     <  1:2530117/93‑1 (MQ=255)

    gcgcTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCaa                                                                                     >  1:495413/1‑93 (MQ=255)

     cgcTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAt                                                                                    <  1:2901155/93‑1 (MQ=255)

       cTGGTAATTTCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTATCCAGCCAGCAAttt                                                                                  <  2:1535072/93‑1 (MQ=255)

       cTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAttt                                                                                  <  1:2587209/93‑1 (MQ=255)

       cTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAAttt                                                                                  <  1:1286475/93‑1 (MQ=255)

        tGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTg                                                                                 >  2:4468932/1‑93 (MQ=255)

         ggTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTgg                                                                                >  2:1318490/1‑93 (MQ=255)

           tAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGtt                                                                              <  1:4331024/93‑1 (MQ=255)

            aaTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             <  1:943323/93‑1 (MQ=255)

            aaTTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTa                                                                             >  1:2682725/1‑93 (MQ=255)

              ttGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAtt                                                                           >  1:376544/1‑93 (MQ=255)

              ttGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAtt                                                                           <  1:3369798/93‑1 (MQ=255)

              ttGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAtt                                                                           <  2:3941906/93‑1 (MQ=255)

              ttGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTAtt                                                                           <  2:616075/93‑1 (MQ=255)

                gCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGc                                                                         <  1:3194898/93‑1 (MQ=255)

                gCTGATCACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGc                                                                         <  1:544198/93‑1 (MQ=255)

                 cTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCt                                                                        <  1:4655453/93‑1 (MQ=255)

                 cTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCt                                                                        <  1:2235202/93‑1 (MQ=255)

                   gatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGa                                                                      <  1:3414385/93‑1 (MQ=255)

                   gatgaCGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGa                                                                      >  2:2156974/1‑93 (MQ=255)

                        cGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCt                                                                 <  2:3213477/93‑1 (MQ=255)

                         ggTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTg                                                                >  1:4364006/1‑93 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               <  1:2113538/93‑1 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               <  2:207651/93‑1 (MQ=255)

                          gTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGa                                                               <  1:2113537/93‑1 (MQ=255)

                              cGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGAtttt                                                           <  1:923168/93‑1 (MQ=255)

                                gTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAg                                                         <  2:3533928/93‑1 (MQ=255)

                                gTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAg                                                         >  1:2159486/1‑93 (MQ=255)

                                 ttGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGt                                                        <  2:3136532/93‑1 (MQ=255)

                                   gTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGc                                                      <  1:4227603/93‑1 (MQ=255)

                                    tAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCa                                                     >  2:4658851/1‑93 (MQ=255)

                                      aaCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCaaa                                                   <  1:4064174/93‑1 (MQ=255)

                                       aCGTTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAAc                                                  <  1:3804565/93‑1 (MQ=255)

                                       aCGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAAc                                                  >  1:893603/1‑93 (MQ=255)

                                         ggTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCa                                                <  2:2878593/93‑1 (MQ=255)

                                          gTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCAt                                               <  1:3558486/93‑1 (MQ=255)

                                           taataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATg                                              >  2:4633048/1‑93 (MQ=255)

                                           taataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATg                                              >  1:1594310/1‑93 (MQ=255)

                                            aataaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGa                                             >  1:2299456/1‑93 (MQ=255)

                                              taaCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACa                                           >  2:4323827/1‑93 (MQ=255)

                                                aCCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACaaa                                         <  1:1825146/93‑1 (MQ=255)

                                                aCCTGTTTATCTTGCCCGGCCCATAAGGAAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACaaa                                         >  1:129851/1‑93 (MQ=255)

                                                 ccTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAg                                        >  2:1860504/1‑93 (MQ=255)

                                                  cTGTTTATCTTGGCCGGCCCATAAGGCAATCTCTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCACACCATGACAAAgc                                       >  1:2531051/1‑93 (MQ=255)

                                                  cTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgc                                       >  1:3946082/1‑93 (MQ=255)

                                                  cTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgc                                       <  1:3655671/93‑1 (MQ=255)

                                                  cTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgc                                       <  2:1947227/93‑1 (MQ=255)

                                                  cTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgc                                       >  2:1987023/1‑93 (MQ=255)

                                                   tGTTTTTCTTGCCGGGCCCATAAGGCAATCTGTAACAAGCAAGCAATTTGTTTATTGCTGAGTGCTGTTTTTAGTGCAAACCATGACAAAgct                                      <  2:2873642/93‑1 (MQ=255)

                                                   tGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgct                                      >  2:4072849/1‑93 (MQ=255)

                                                    gTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctg                                     >  1:4147852/1‑93 (MQ=255)

                                                    gTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctg                                     >  1:1107933/1‑93 (MQ=255)

                                                    gTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctg                                     >  1:1618348/1‑93 (MQ=255)

                                                       tATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctggct                                  >  2:1919959/1‑93 (MQ=255)

                                                        aTCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgctggctg                                 >  2:4057577/1‑93 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCCATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                >  2:2556479/1‑93 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAgatggctgg                                >  2:4374432/1‑92 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                >  2:2063753/1‑93 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                <  2:618562/93‑1 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                <  1:1516513/93‑1 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                >  1:3747854/1‑93 (MQ=255)

                                                         tCTTGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGa                                >  1:329762/1‑93 (MQ=255)

                                                            tGCCCGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTa                             <  1:429929/93‑1 (MQ=255)

                                                                cGGCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAc                         >  2:195748/1‑93 (MQ=255)

                                                                  gCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAccc                       >  2:520350/1‑93 (MQ=255)

                                                                  gCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAccc                       >  1:1403094/1‑93 (MQ=255)

                                                                  gCCCATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTAccc                       <  2:2712132/93‑1 (MQ=255)

                                                                     cATAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTg                    >  1:4165470/1‑93 (MQ=255)

                                                                      aTAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGc                   >  2:4164231/1‑93 (MQ=255)

                                                                      aTAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGc                   <  1:1128506/93‑1 (MQ=255)

                                                                      aTAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGc                   >  2:1469335/1‑93 (MQ=255)

                                                                       tAAGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCg                  >  2:4534215/1‑93 (MQ=255)

                                                                        aaGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGa                 <  1:1668820/93‑1 (MQ=255)

                                                                         aGGCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAg                >  2:4005192/1‑93 (MQ=255)

                                                                          ggCAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGc               >  1:3244570/1‑93 (MQ=255)

                                                                          ggCAATCTGTAACCAGCCAGCAATGTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGc               <  2:1633335/93‑1 (MQ=255)

                                                                            cAATCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCtt             >  1:2152741/1‑93 (MQ=255)

                                                                             aaTCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTc            <  2:17925/93‑1 (MQ=255)

                                                                             aaTCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTc            >  1:4122525/1‑93 (MQ=255)

                                                                             aaTCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTc            >  1:421001/1‑93 (MQ=255)

                                                                             aaTCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTc            >  1:66997/1‑93 (MQ=255)

                                                                               tCTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaa          >  2:4686298/1‑93 (MQ=255)

                                                                                cTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaat         >  2:3467437/1‑93 (MQ=255)

                                                                                cTGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaat         <  2:2674191/93‑1 (MQ=255)

                                                                                 tGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaata        <  1:2403827/93‑1 (MQ=255)

                                                                                 tGTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaata        <  1:4554439/93‑1 (MQ=255)

                                                                                  gTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataa       <  1:4490237/93‑1 (MQ=255)

                                                                                  gTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataa       <  2:1453657/93‑1 (MQ=255)

                                                                                  gTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataa       <  2:1033394/93‑1 (MQ=255)

                                                                                  gTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataa       <  1:2838158/93‑1 (MQ=255)

                                                                                  gTAACCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCaataa       <  2:387430/93‑1 (MQ=255)

                                                                                    aaCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATc     >  1:78753/1‑93 (MQ=255)

                                                                                    aaCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATc     >  2:2675017/1‑93 (MQ=255)

                                                                                     aCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCa    >  1:2093468/1‑93 (MQ=255)

                                                                                     aCCAGCCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCa    >  2:3073065/1‑93 (MQ=255)

                                                                                      ccagccagCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCaa   <  1:3919477/93‑1 (MQ=255)

                                                                                      ccagccagCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCaa   <  2:2892939/93‑1 (MQ=255)

                                                                                       cagccagcAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAt  <  1:111944/93‑1 (MQ=255)

CCACGCGCTGGTAATTGCTGATGACGGTAGCGGTTGTAAACGGTAATAACCTGTTTATCTTGCCCGGCCCATAAGGCAATCTGTAACCAGTCAGCAATTTGGTTATTGCTGAGTGCTGATTTTAGTGCAAACCATGACAAAGCTGGCTGAGTATTACCCTTGCGAGCTTCAATAATCAAT  >  NC_000913/1091214‑1091393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`