BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,102,451	A→G	intergenic (‑32/+435)	csgD ← / ← b4518	CsgD/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,102,451	0	A	G	100.0%	367.3 / NA	116	intergenic (‑32/+435)	csgD/b4518	CsgD/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/65); total (51/65)

Only 100 of 116 total aligned reads displayed.

ATTTAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACACCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAATGGGT  >  NC_000913/1102365‑1102539

aTTTAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGAc                                                                                    <  1:3940481/93‑1 (MQ=255)

 tttAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACa                                                                                   <  2:183852/93‑1 (MQ=255)

 tttAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACa                                                                                   >  1:432335/1‑93 (MQ=255)

  ttAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAg                                                                                  >  1:1714488/1‑93 (MQ=255)

  ttAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAg                                                                                  >  1:2888386/1‑93 (MQ=255)

   tAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGc                                                                                 <  1:458504/93‑1 (MQ=255)

   tAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGc                                                                                 <  1:2233292/93‑1 (MQ=255)

     gTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTg                                                                               <  1:632896/93‑1 (MQ=255)

     gTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTg                                                                               >  2:2251216/1‑93 (MQ=255)

      tGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGc                                                                              >  1:2885635/1‑93 (MQ=255)

       gATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGcc                                                                             >  2:3927581/1‑93 (MQ=255)

        aTCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCct                                                                            >  1:3730188/1‑93 (MQ=255)

         tCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCctc                                                                           <  2:1383085/93‑1 (MQ=255)

            acaaTAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTaa                                                                        >  2:3159288/1‑93 (MQ=255)

            acaaTAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTaa                                                                        >  2:4246818/1‑93 (MQ=255)

             caaTAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTaaa                                                                       >  2:257926/1‑93 (MQ=255)

              aataatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTaaaa                                                                      >  1:1531463/1‑93 (MQ=255)

               ataatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAATCCCCGCTTTTTTTATTGATCGCGCGCCTGACAGCTGCCTCTAAAAt                                                                     <  2:3779754/93‑1 (MQ=255)

                taatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATa                                                                    <  2:1189591/93‑1 (MQ=255)

                taatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATa                                                                    >  1:222472/1‑93 (MQ=255)

                taatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATa                                                                    >  1:3092865/1‑93 (MQ=255)

                taatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATa                                                                    <  1:4013361/93‑1 (MQ=255)

                taatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATa                                                                    >  2:3743394/1‑93 (MQ=255)

                 aatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAg                                                                   >  2:2866233/1‑93 (MQ=255)

                 aatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAg                                                                   <  1:3114223/93‑1 (MQ=255)

                 aatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAg                                                                   >  2:255892/1‑93 (MQ=255)

                 aatGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAg                                                                   >  2:1178890/1‑93 (MQ=255)

                   tGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGaa                                                                 <  2:532140/93‑1 (MQ=255)

                    gTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAg                                                                <  1:2847815/93‑1 (MQ=255)

                     tATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGc                                                               <  1:3393479/93‑1 (MQ=255)

                      aTGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCa                                                              >  2:282563/1‑93 (MQ=255)

                        gACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCAcc                                                            <  1:1809705/93‑1 (MQ=255)

                         aCCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCa                                                           >  1:796361/1‑93 (MQ=255)

                          ccATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAg                                                          >  1:1640115/1‑93 (MQ=255)

                           cATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGa                                                         >  1:1373582/1‑93 (MQ=255)

                            aTGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGaa                                                        <  1:3984619/93‑1 (MQ=255)

                             tGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAg                                                       >  1:3384431/1‑93 (MQ=255)

                             tGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAg                                                       >  2:4030098/1‑93 (MQ=255)

                              gAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGt                                                      <  1:4164257/93‑1 (MQ=255)

                              gAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGt                                                      <  1:865160/93‑1 (MQ=255)

                               aaTACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTa                                                     <  2:4057809/93‑1 (MQ=255)

                                aTACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTAc                                                    >  2:1855416/1‑93 (MQ=255)

                                 tACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACt                                                   <  1:1402200/93‑1 (MQ=255)

                                   cTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGa                                                 >  2:3665714/1‑93 (MQ=255)

                                    tATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGAc                                                >  1:2141724/1‑93 (MQ=255)

                                    tATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGAc                                                <  1:568028/93‑1 (MQ=255)

                                     aTGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACa                                               <  2:2997321/93‑1 (MQ=255)

                                     aTGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACa                                               <  2:2446414/93‑1 (MQ=255)

                                     aTGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACa                                               >  1:540596/1‑93 (MQ=255)

                                       ggACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGa                                             <  2:3399284/93‑1 (MQ=255)

                                       ggACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGa                                             <  2:722648/93‑1 (MQ=255)

                                       ggACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGa                                             <  2:2150527/93‑1 (MQ=255)

                                        gACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGAt                                            <  1:1548900/93‑1 (MQ=255)

                                        gACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGAt                                            <  1:3139552/93‑1 (MQ=255)

                                        gACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGAt                                            >  2:4457331/1‑93 (MQ=255)

                                          cTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGt                                          <  2:1304154/93‑1 (MQ=255)

                                          cTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGt                                          >  2:4286177/1‑93 (MQ=255)

                                           ttCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGtt                                         >  2:2836402/1‑93 (MQ=255)

                                           ttCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGtt                                         <  2:2970304/93‑1 (MQ=255)

                                           ttCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGtt                                         >  1:3706400/1‑93 (MQ=255)

                                           ttCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGtt                                         >  1:3983899/1‑93 (MQ=255)

                                            tCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTg                                        <  2:252961/93‑1 (MQ=255)

                                            tCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTg                                        >  2:3863997/1‑93 (MQ=255)

                                               ttAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCAc                                     <  1:3428929/93‑1 (MQ=255)

                                                tAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCAct                                    >  1:3795352/1‑93 (MQ=255)

                                                  aaCATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCActgc                                  <  2:4227071/93‑1 (MQ=255)

                                                  aaCATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCActgc                                  >  1:310130/1‑93 (MQ=255)

                                                  aaCATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCActgc                                  >  2:695512/1‑93 (MQ=255)

                                                   aCATGATGAAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCActgct                                 <  1:772642/93‑1 (MQ=255)

                                                       gatgaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCtgtgt                             <  2:1819477/93‑1 (MQ=255)

                                                       gatgaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCtgtgt                             <  2:4651384/93‑1 (MQ=255)

                                                       gatgaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCtgtgt                             <  1:99185/93‑1 (MQ=255)

                                                       gatgaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCtgtgt                             <  2:69467/93‑1 (MQ=255)

                                                        atgaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCtgtgtg                            >  2:766364/1‑93 (MQ=255)

                                                         tgaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTgtgtgt                           <  2:3268737/93‑1 (MQ=255)

                                                         tgaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTgtgtgt                           >  2:442160/1‑93 (MQ=255)

                                                          gaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTgta                          <  2:1248845/93‑1 (MQ=255)

                                                          gaAACCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTgta                          <  2:4508148/93‑1 (MQ=255)

                                                           aaaCCCCGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTgtag                         >  1:3153002/1‑93 (MQ=255)

                                                              ccccGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGtaa                      <  2:73269/93‑1 (MQ=255)

                                                                ccGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGtaata                    >  1:3116686/1‑93 (MQ=255)

                                                                 cGCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGtaataa                   >  2:1334849/1‑93 (MQ=255)

                                                                  gCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATaaa                  <  1:2058203/93‑1 (MQ=255)

                                                                  gCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATaaa                  <  2:1192319/93‑1 (MQ=255)

                                                                  gCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATaaa                  <  2:4527018/93‑1 (MQ=255)

                                                                  gCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATaaa                  >  1:2624211/1‑93 (MQ=255)

                                                                  gCTTTTTTTATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATaaa                  <  2:411532/93‑1 (MQ=255)

                                                                      tttttATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAg              <  1:3061689/93‑1 (MQ=255)

                                                                         ttATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGccc           <  1:1758213/93‑1 (MQ=255)

                                                                         ttATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGccc           <  1:2846693/93‑1 (MQ=255)

                                                                         ttATTGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGccc           <  1:2218979/93‑1 (MQ=255)

                                                                             tGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTaaa       <  2:2419290/93‑1 (MQ=255)

                                                                             tGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTaaa       <  1:593227/93‑1 (MQ=255)

                                                                             tGATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTaaa       <  1:691801/93‑1 (MQ=255)

                                                                              gATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAAt      <  1:282563/93‑1 (MQ=255)

                                                                              gATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAAt      <  2:2290037/93‑1 (MQ=255)

                                                                              gATCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAAt      <  1:874665/93‑1 (MQ=255)

                                                                               aTCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAATg     <  2:2665190/93‑1 (MQ=255)

                                                                                tCGCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAATgg    <  1:784508/93‑1 (MQ=255)

                                                                                  gCACGCCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAATGGGt  <  2:734651/93‑1 (MQ=255)

ATTTAGTGATCAACAATAATGTATGACCATGAATACTATGGACTTCATTAAACATGATGAAACCCCGCTTTTTTTATTGATCGCACACCTGACAGCTGCCTCTAAAATAGAAGCACCAGAAGTACTGACAGATGTTGCACTGCTGTGTGTAGTAATAAATCAGCCCTAAATGGGT  >  NC_000913/1102365‑1102539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`