Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 102,502 A→G A90A (GCA→GCG ddlB → D‑alanine‑D‑alanine ligase B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913102,5020AG99.4% 540.2 / ‑5.8 172A90A (GCA→GCGddlBD‑alanine‑D‑alanine ligase B
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (93/78);  minor base C (1/0);  total (94/78)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 179 total aligned reads displayed.

CGCGCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCATCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCCGCGC  >  NC_000913/102412‑102591
                                                                                          |                                                                                         
cgcgCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTc                                                                                         <  1:1911548/93‑1 (MQ=255)
 gcgcTACACGGTCTCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCt                                                                                        <  1:1972446/93‑1 (MQ=255)
 gcgcTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCt                                                                                        <  2:4096203/93‑1 (MQ=255)
  cgcTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTg                                                                                       <  1:2683252/93‑1 (MQ=255)
   gcTACACGGTCGCGGCGGTGAAGGTGGTACGCTGCAGGGGATGCTCGAGCTGATGGGGTTGCCTTATACCGGAAGCGGTGGGATGGCGTCTgg                                                                                      >  2:2095564/1‑92 (MQ=255)
    cTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcg                                                                                     >  1:2212500/1‑93 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATTGCGTCTgagc                                                                                    >  2:2892814/1‑93 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    >  2:1044525/1‑93 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    >  2:3002257/1‑93 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    <  1:264665/93‑1 (MQ=255)
     tACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    >  1:939078/1‑93 (MQ=255)
     gacacGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTgcgc                                                                                    <  2:1848141/92‑1 (MQ=255)
      acacGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCt                                                                                   >  2:3111800/1‑93 (MQ=255)
       cacGGTCGCGGCGGGGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCtt                                                                                  >  2:1475576/1‑93 (MQ=255)
        acGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCttt                                                                                 >  1:560706/1‑93 (MQ=255)
         cGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATCCCGGAAGCGGAGTGATGGCGTCTGCGCTTTc                                                                                <  2:160598/93‑1 (MQ=255)
          ggTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCa                                                                               <  2:374506/93‑1 (MQ=255)
           gTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCaa                                                                              >  1:3466174/1‑93 (MQ=255)
           gTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCaa                                                                              <  2:893247/93‑1 (MQ=255)
           gTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCaa                                                                              >  1:2040782/1‑93 (MQ=255)
            tCGCGGCGTTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGCCTGCGCTTTCAAt                                                                             <  2:3814065/93‑1 (MQ=255)
            tCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAAt                                                                             <  1:275206/93‑1 (MQ=255)
            tCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAAt                                                                             <  1:4379307/93‑1 (MQ=255)
             ctcggcggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATg                                                                            <  2:2010004/91‑1 (MQ=255)
             cgcgGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATg                                                                            <  2:3758800/93‑1 (MQ=255)
              gcggcgGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATgg                                                                           <  1:3283527/93‑1 (MQ=255)
               cggcggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGa                                                                          <  1:2491612/93‑1 (MQ=255)
               cggcggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGa                                                                          <  1:4259358/93‑1 (MQ=255)
                ggcggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGAt                                                                         <  2:4373306/93‑1 (MQ=255)
                 gcggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATa                                                                        >  1:3780639/1‑93 (MQ=255)
                   ggTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATaaa                                                                      >  1:859788/1‑93 (MQ=255)
                    gTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAAc                                                                     >  2:337648/1‑93 (MQ=255)
                    gTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAAc                                                                     >  2:4048258/1‑93 (MQ=255)
                    gTGAAGATGGAAGGCTGCAGGGGATGCTCGAGCAGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGCTAAAc                                                                     >  2:2344547/1‑93 (MQ=255)
                     tGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACt                                                                    <  1:3243361/93‑1 (MQ=255)
                      gAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTa                                                                   >  2:2772410/1‑93 (MQ=255)
                       aaGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTAc                                                                  >  1:4687882/1‑93 (MQ=255)
                       aaGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTAc                                                                  >  2:1929516/1‑93 (MQ=255)
                       aaGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTAc                                                                  <  1:2464498/93‑1 (MQ=255)
                        aGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACg                                                                 >  2:4196995/1‑93 (MQ=255)
                        aGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACg                                                                 >  1:2388971/1‑93 (MQ=255)
                         gATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACgc                                                                >  1:4311325/1‑93 (MQ=255)
                            ggTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACgcagc                                                             >  1:3818292/1‑93 (MQ=255)
                            ggTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACgcagc                                                             <  1:1480169/93‑1 (MQ=255)
                             gTACGCTACAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACgcagca                                                            >  2:1000941/1‑93 (MQ=255)
                                cGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAAc                                                         >  1:1097085/1‑93 (MQ=255)
                                cGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAAc                                                         >  2:1658689/1‑93 (MQ=255)
                                cGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAAc                                                         <  1:2137360/93‑1 (MQ=255)
                                 gCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACt                                                        >  2:293168/1‑93 (MQ=255)
                                   tGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTc                                                      <  1:3977007/93‑1 (MQ=255)
                                    gCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCt                                                     >  1:3515042/1‑93 (MQ=255)
                                    gCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCt                                                     <  2:4524927/93‑1 (MQ=255)
                                     cAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTa                                                    <  1:4529169/93‑1 (MQ=255)
                                     cAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTa                                                    <  2:3794698/93‑1 (MQ=255)
                                     cAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTa                                                    >  2:2093047/1‑93 (MQ=255)
                                      aGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTAt                                                   >  1:4503825/1‑93 (MQ=255)
                                      aGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTAt                                                   <  1:3496938/93‑1 (MQ=255)
                                       ggtgATGCTCGAGCTGATGGGCTTGCCGTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATg                                                  <  1:1608529/90‑1 (MQ=255)
                                        gggATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATgg                                                 >  1:4462753/1‑93 (MQ=255)
                                         ggATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGc                                                <  1:2028786/93‑1 (MQ=255)
                                         ggATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGc                                                >  1:4477679/1‑93 (MQ=255)
                                           aTGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCaa                                              <  2:4127344/93‑1 (MQ=255)
                                           aTGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCaa                                              <  1:1054278/93‑1 (MQ=255)
                                            tGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAg                                             >  2:2033200/1‑93 (MQ=255)
                                            tGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAg                                             >  1:812350/1‑93 (MQ=255)
                                             gCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAgg                                            <  1:1215500/93‑1 (MQ=255)
                                               tCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTg                                          <  1:3137404/93‑1 (MQ=255)
                                                 gAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGcc                                        >  1:3393160/1‑93 (MQ=255)
                                                 gAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGcc                                        >  2:2557492/1‑93 (MQ=255)
                                                   gCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCgg                                      >  2:414839/1‑93 (MQ=255)
                                                    cTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGt                                     >  1:3664389/1‑93 (MQ=255)
                                                     tGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGtt                                    >  2:97564/1‑93 (MQ=255)
                                                     tGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGtt                                    <  1:3947537/93‑1 (MQ=255)
                                                     tGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGtt                                    <  2:3159802/93‑1 (MQ=255)
                                                       aTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTa                                  <  2:1060290/93‑1 (MQ=255)
                                                       aTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTa                                  >  1:2227913/1‑93 (MQ=255)
                                                       aTGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTa                                  >  2:3573313/1‑93 (MQ=255)
                                                         gggCTTGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTAcc                                <  1:1582045/93‑1 (MQ=255)
                                                             ttGCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGGTTACCGGTc                            >  1:1342407/1‑93 (MQ=255)
                                                               gCCTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTcgc                          >  2:1804947/1‑93 (MQ=255)
                                                                ccTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTcgcg                         >  2:2234708/1‑93 (MQ=255)
                                                                 cTTATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCgcgc                        >  2:3019244/1‑93 (MQ=255)
                                                                  ttATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGcc                       >  2:1525064/1‑93 (MQ=255)
                                                                  ttATACCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGcc                       >  1:1726993/1‑93 (MQ=255)
                                                                   tataCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCg                      <  2:3350348/93‑1 (MQ=255)
                                                                   tataCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCg                      <  1:420158/93‑1 (MQ=255)
                                                                    ataCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGt                     <  2:3595297/93‑1 (MQ=255)
                                                                     taCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTg                    >  1:3512431/1‑93 (MQ=255)
                                                                      aCCGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTgg                   <  1:2347184/93‑1 (MQ=255)
                                                                      aCCGGAAGCGGAGTGATGGCCTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTgg                   >  2:627413/1‑93 (MQ=255)
                                                                       ccGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTggg                  <  2:1407367/93‑1 (MQ=255)
                                                                       ccGGAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTggg                  <  2:4554892/93‑1 (MQ=255)
                                                                         ggAAGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTa                <  1:3042127/93‑1 (MQ=255)
                                                                            aGCGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGCAGCg             >  2:1114445/1‑93 (MQ=255)
                                                                              cGGAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGtt           <  2:3365071/93‑1 (MQ=255)
                                                                                gAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTaa         >  2:3615159/1‑93 (MQ=255)
                                                                                gAGTGATGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTaa         >  1:889288/1‑93 (MQ=255)
                                                                                      tGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCcgcg   >  2:2890887/1‑93 (MQ=255)
                                                                                      tGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCcgcg   >  2:3258734/1‑93 (MQ=255)
                                                                                      tGGCGTCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCcgcg   >  1:102913/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGCGCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCATCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCCGCGC  >  NC_000913/102412‑102591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: