BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,126,600	A→G	D191G (GAC→GGC)	mviM →	putative virulence factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,126,600	0	A	G	100.0%	401.4 / NA	130	D191G (GAC→GGC)	mviM	putative virulence factor
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (65/65); total (65/65)

Only 100 of 136 total aligned reads displayed.

GCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGACGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAG  >  NC_000913/1126511‑1126688

gCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGgcgc                                                                                       <  2:678239/93‑1 (MQ=255)

 cTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCt                                                                                      >  1:2804364/1‑93 (MQ=255)

 cTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCt                                                                                      >  1:1377794/1‑93 (MQ=255)

  tGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTGCTGACTAACGGCGCTg                                                                                     <  1:1612335/93‑1 (MQ=255)

  tGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTg                                                                                     >  2:2706059/1‑93 (MQ=255)

   ggATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTgt                                                                                    >  2:1916514/1‑92 (MQ=255)

    gatgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGc                                                                                   >  2:3617417/1‑93 (MQ=255)

    gatgatTATCTGCATGGGGTGGATACAGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGc                                                                                   <  2:3045233/93‑1 (MQ=255)

      tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                 >  2:86475/1‑93 (MQ=255)

      tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                 >  1:1182944/1‑93 (MQ=255)

      tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                 >  1:3713538/1‑93 (MQ=255)

      tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                 >  1:4064152/1‑93 (MQ=255)

      tgatTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGa                                                                                 <  2:1367355/93‑1 (MQ=255)

        atTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGaaa                                                                               >  2:2564077/1‑93 (MQ=255)

         ttATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAAt                                                                              >  2:4001982/1‑93 (MQ=255)

          tATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATg                                                                             <  1:2383917/93‑1 (MQ=255)

          tATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATg                                                                             >  1:2254582/1‑93 (MQ=255)

          tATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATg                                                                             >  2:4635830/1‑93 (MQ=255)

           aTCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGCAATGc                                                                            >  1:18324/1‑93 (MQ=255)

           aTCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGc                                                                            <  1:2393389/93‑1 (MQ=255)

            tCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCt                                                                           >  1:597987/1‑93 (MQ=255)

            tCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCt                                                                           <  1:2502614/93‑1 (MQ=255)

              tGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGt                                                                         <  1:3425111/93‑1 (MQ=255)

               gCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGtt                                                                        <  2:926087/93‑1 (MQ=255)

               gCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGtt                                                                        <  1:501754/93‑1 (MQ=255)

                cATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGttt                                                                       <  1:1138483/93‑1 (MQ=255)

                cATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGttt                                                                       <  2:746169/93‑1 (MQ=255)

                 aTGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTg                                                                      >  1:3390838/1‑93 (MQ=255)

                  tgtgGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGc                                                                     >  2:4626868/1‑93 (MQ=255)

                   gtggtgGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGcc                                                                    >  1:1082940/1‑93 (MQ=255)

                   gtggtgGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGcc                                                                    >  2:1949564/1‑93 (MQ=255)

                     ggtggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGa                                                                  <  2:4678364/93‑1 (MQ=255)

                     ggtggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGAGCTGGCGAAATGTTGTTTGCCGa                                                                  >  1:2825213/1‑93 (MQ=255)

                      gtggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAg                                                                 >  1:1442944/1‑93 (MQ=255)

                       tggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGc                                                                <  2:4289141/93‑1 (MQ=255)

                        ggATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCa                                                               >  2:2427290/1‑93 (MQ=255)

                         gATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCAc                                                              >  1:2583312/1‑93 (MQ=255)

                           tACTGCGCTGTGGTTGACGGGCGGCAAAGCCTCTCTGGATGGCGGCACGCTACTGACTAACGGCGCTCGCGAAATGCTGTTTGCCGAGCACCa                                                            >  2:3051421/1‑93 (MQ=255)

                           tACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCa                                                            <  1:764476/93‑1 (MQ=255)

                             ccGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCAtt                                                          <  1:2390916/93‑1 (MQ=255)

                             ccGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGAGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGACCACCAtt                                                          >  2:2176217/1‑93 (MQ=255)

                                 gcTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTc                                                      >  2:570081/1‑93 (MQ=255)

                                   tgtgGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCgg                                                    >  2:520578/1‑93 (MQ=255)

                                      ggTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTg                                                 >  2:2405034/1‑93 (MQ=255)

                                      ggTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTg                                                 <  2:1123007/93‑1 (MQ=255)

                                       gtggTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTgg                                                <  2:1627687/90‑1 (MQ=255)

                                        ttGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGt                                               >  2:796120/1‑93 (MQ=255)

                                         tGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTc                                              <  1:2470772/93‑1 (MQ=255)

                                           tCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCTGCTGGTCCt                                            <  2:4464949/93‑1 (MQ=255)

                                           tCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCt                                            >  1:814536/1‑93 (MQ=255)

                                           tCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCt                                            <  2:1763094/93‑1 (MQ=255)

                                           tCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCt                                            >  2:724313/1‑93 (MQ=255)

                                           tCGGCCGGCGAAGCCGCTCTGGATGGCGGTACCCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCt                                            <  2:2982232/93‑1 (MQ=255)

                                               gcggcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGc                                        <  1:3981117/93‑1 (MQ=255)

                                               gcggcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGc                                        <  2:3924630/93‑1 (MQ=255)

                                                 ggcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAg                                      >  1:946329/1‑93 (MQ=255)

                                                  gcAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGa                                     >  2:3433253/1‑93 (MQ=255)

                                                    aaaGCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATc                                   >  1:3643582/1‑93 (MQ=255)

                                                       gCCTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGaccacc                                >  2:4426239/1‑93 (MQ=255)

                                                       accTCTCTGGATGGCGGTACGCTAGTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcacc                                <  2:2829365/92‑1 (MQ=255)

                                                        ccTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcacca                               >  2:3969644/1‑93 (MQ=255)

                                                        ccTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcacca                               <  2:1324337/93‑1 (MQ=255)

                                                        ccTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcacca                               >  2:244691/1‑93 (MQ=255)

                                                        ccTCTCTGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcacca                               <  2:3476195/93‑1 (MQ=255)

                                                         ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcaccac                              >  1:47291/1‑93 (MQ=255)

                                                         ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcaccac                              >  1:1363622/1‑93 (MQ=255)

                                                         ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcaccac                              <  1:2484462/93‑1 (MQ=255)

                                                         ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcaccac                              >  1:615484/1‑93 (MQ=255)

                                                         ctctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATcaccac                              <  2:1557919/93‑1 (MQ=255)

                                                          tctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCaccacc                             <  1:3266452/93‑1 (MQ=255)

                                                          tctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCaccacc                             >  1:2234904/1‑93 (MQ=255)

                                                          tctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGGCCTTTGCAGATCaccacc                             >  1:2736483/1‑93 (MQ=255)

                                                          tctctGGAGGGCGGTACGCCACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCaccacc                             >  2:4573852/1‑93 (MQ=255)

                                                           ctctGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCt                            <  2:2529579/93‑1 (MQ=255)

                                                              tGGATGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTa                         >  2:3395438/1‑93 (MQ=255)

                                                               ggATGGCGCTACGCTATTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCTCCTGTAt                        <  2:4154317/93‑1 (MQ=255)

                                                                 aTGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGc                      >  2:67246/1‑93 (MQ=255)

                                                                  tGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCa                     >  2:1479370/1‑93 (MQ=255)

                                                                  tGGCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCa                     <  1:3984318/93‑1 (MQ=255)

                                                                   ggCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGGAGATCACCACCTGTATGCAt                    >  2:2701445/1‑93 (MQ=255)

                                                                   ggCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCAt                    <  1:4074624/93‑1 (MQ=255)

                                                                    gCGGTACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATc                   <  2:644101/93‑1 (MQ=255)

                                                                        tACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCg               >  1:4474005/1‑93 (MQ=255)

                                                                        tACGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCg               <  1:3709155/93‑1 (MQ=255)

                                                                         aCGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGt              <  2:3995796/93‑1 (MQ=255)

                                                                         aCGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGt              <  1:1930161/93‑1 (MQ=255)

                                                                         aCGCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGt              <  1:3267463/93‑1 (MQ=255)

                                                                           gCTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGc            >  1:2600869/1‑93 (MQ=255)

                                                                            cTACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGcc           >  1:1284724/1‑93 (MQ=255)

                                                                             tACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGCTCACCACCTGTATGCATCGCCGTGGCg          >  2:4124106/1‑93 (MQ=255)

                                                                             tACTGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCg          >  1:1163006/1‑93 (MQ=255)

                                                                                tGACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGaa       <  2:3356363/93‑1 (MQ=255)

                                                                                 gACTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAg      >  1:3859162/1‑93 (MQ=255)

                                                                                 gACTAACGGCGCTGGCGAAATGATGTTTGCCGAGCTCCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAg      <  1:4670594/93‑1 (MQ=255)

                                                                                   cTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTc    <  2:1377794/93‑1 (MQ=255)

                                                                                   cTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTc    <  2:3874115/93‑1 (MQ=255)

                                                                                   cTAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTc    <  1:3045207/93‑1 (MQ=255)

                                                                                    tAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAgcaa   >  1:1333077/1‑90 (MQ=255)

                                                                                    tAACGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCa   <  1:3540407/93‑1 (MQ=255)

                                                                                     aaCGGCGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAg  <  2:3911766/93‑1 (MQ=255)

GCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGACGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAG  >  NC_000913/1126511‑1126688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`