BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,130,577	A→G	S113G (AGC→GGC)	flgB →	FlgB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,130,577	0	A	G	100.0%	317.9 / NA	101	S113G (AGC→GGC)	flgB	FlgB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (25/76); total (25/76)

Only 100 of 132 total aligned reads displayed.

GCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGATGG  >  NC_000913/1130487‑1130664

gCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGc                                                                                       <  1:1271949/93‑1 (MQ=255)

gCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAATTTGCCGATAACAGc                                                                                       >  2:3474706/1‑93 (MQ=255)

 cAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGcc                                                                                      <  2:4301829/93‑1 (MQ=255)

  aGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCt                                                                                     <  1:4079782/93‑1 (MQ=255)

  aGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCt                                                                                     <  2:720217/93‑1 (MQ=255)

   gAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGGACGCACCCAGGTTGCCGATAACAGCCtc                                                                                    >  2:3309313/1‑92 (MQ=255)

   gAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTg                                                                                    <  1:3974128/93‑1 (MQ=255)

   gAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTg                                                                                    <  1:3672055/93‑1 (MQ=255)

    aaCTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGc                                                                                   <  1:492355/93‑1 (MQ=255)

     aCTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGCAAGCACCCAGCTTGTCCATAACGGGCTGCa                                                                                  >  1:1356634/1‑93 (MQ=255)

     aCTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGGTTTGCGGTAAAGGCCTggc                                                                                  >  2:802437/1‑91 (MQ=255)

        gCAATGCCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATa                                                                               >  2:1273858/1‑93 (MQ=255)

         cAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATAc                                                                              <  1:780367/93‑1 (MQ=255)

         cAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCCCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATAc                                                                              >  1:134329/1‑93 (MQ=255)

          aaTACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGTATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATAcc                                                                             <  2:2146160/93‑1 (MQ=255)

          aaTACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATAcc                                                                             <  2:2146279/93‑1 (MQ=255)

            tACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCGCCCAGGTTGCCGATAACGGGCTGCAATAACAg                                                                           >  2:2876175/1‑93 (MQ=255)

            tACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCAATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAg                                                                           <  2:4277300/93‑1 (MQ=255)

              ccGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGGACGCACCCAGTTTTCCGATAACGGCCCGCCATACCAGAt                                                                         >  2:1128193/1‑93 (MQ=255)

                gTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGCACGCACCCAGTTTGCCGATAACGGCCCGCAATACCAGATGa                                                                       >  1:2539897/1‑93 (MQ=255)

                 tATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAg                                                                      <  2:2350043/93‑1 (MQ=255)

                 tATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGCTTGCCGATAACGGCCTGCAATACCAGATGAg                                                                      >  1:3416447/1‑93 (MQ=255)

                  aTTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCCGGTTGCCGATAAAGGCCTGCAATACCCGATGAGc                                                                     >  2:1977487/1‑93 (MQ=255)

                  aTTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCCATACCAGATGAGc                                                                     >  1:1018966/1‑93 (MQ=255)

                  aTTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGc                                                                     <  1:78825/93‑1 (MQ=255)

                  aTTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAAAGCACCCAGTTTGACGATAACAGGCTGCAATACCAGATGAGc                                                                     >  1:2210192/1‑93 (MQ=255)

                   ttCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGcc                                                                    <  2:3058876/93‑1 (MQ=255)

                    tCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCt                                                                   <  1:3952738/93‑1 (MQ=255)

                      cGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGGCTGCAATAACAGATGAGCCTTa                                                                 >  2:1774656/1‑93 (MQ=255)

                      cGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTa                                                                 <  1:2334084/93‑1 (MQ=255)

                       ggACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAg                                                                <  2:1887525/93‑1 (MQ=255)

                       ggACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAg                                                                <  2:1124585/93‑1 (MQ=255)

                          ccAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAgcgc                                                             >  2:255591/1‑93 (MQ=255)

                            cgCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGt                                                           <  1:328230/92‑1 (MQ=255)

                            aGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGt                                                           <  2:4458470/93‑1 (MQ=255)

                            aGCCTTCGCTTGACGGTAATACCGTCGATATGGATCCCGAACGCACCCCGTTTGCCGATAACGGCCTGCCATACCAGATGAGCCCTAGCGCGt                                                           >  2:1240856/1‑93 (MQ=255)

                             gCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCCGTTTGCCGATAAAGGGCTGCCATACCAAAAGAGCCCTAgcgggct                                                          >  2:397984/1‑89 (MQ=255)

                             gCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGtt                                                          <  1:4203031/93‑1 (MQ=255)

                             gCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGtt                                                          <  1:1754353/93‑1 (MQ=255)

                             gCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCACTTTTCCGATAAAGGCCTGCCATACCCGATGAGCCTTAGCGCGtt                                                          >  2:1656849/1‑93 (MQ=255)

                              ccTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCCCCCAGTTTGCCGATAACGGCCCGCAATACCAAATGAGCCCTAGTGGGTTg                                                         >  1:798796/1‑93 (MQ=255)

                              ccTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTg                                                         <  2:263078/93‑1 (MQ=255)

                                ttCGCTTGACGGTAATCCCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAg                                                       <  2:2801022/93‑1 (MQ=255)

                                ttCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAg                                                       <  1:4022376/93‑1 (MQ=255)

                                ttCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAg                                                       <  2:4668397/93‑1 (MQ=255)

                                     ttGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGc                                                  <  1:2437249/93‑1 (MQ=255)

                                     ttGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGc                                                  <  1:2624552/93‑1 (MQ=255)

                                       gACGGTAATACCGTCGATATGGATCCCGGACACACCCAGGTTGGCGATAACCGCCCGCAAAACCAGATTAGCCTTCGCGCGGTgggcgggcga                                                >  2:939989/1‑91 (MQ=255)

                                        aCGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCaaa                                               <  2:1343000/93‑1 (MQ=255)

                                         cGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAAt                                              <  2:2134362/93‑1 (MQ=255)

                                          ggTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCCGCAATACCAGATGAGCCTTAGCGCGGTGAGCGGGCAAATc                                             >  1:811974/1‑93 (MQ=255)

                                           gTAATACCGTCGATATGGATCGCGAACGCACCCCGGTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGCTGAGCGGGCAAATCa                                            >  2:439626/1‑93 (MQ=255)

                                            tAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCCGATGAGCCTTAGCGCGTTTAGCGGGCAAATCaa                                           >  1:3149106/1‑93 (MQ=255)

                                             aaTACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCaaa                                          >  1:4671856/1‑93 (MQ=255)

                                             aaTACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCaaa                                          <  1:2925908/93‑1 (MQ=255)

                                             aaTACCGTCGATATGGATCGCGAAAGCACCCAGATTGCCGATAACGGCCTGCAATACCAGAAGAGCCCTAGCGCGCTGAGCGGGGAAATCaaa                                          >  2:3649832/1‑93 (MQ=255)

                                              aTACCGTCGATATGGATCGGGAACGCACCCAGTTTTCCGATAACGGCCTGCACTACCAGATGAGCCTTTGAGCGTTGAGCGGGCAAATCAAAg                                         >  2:4632130/1‑93 (MQ=255)

                                                 ccGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCa                                      <  2:3499903/93‑1 (MQ=255)

                                                 ccGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCa                                      <  2:522864/93‑1 (MQ=255)

                                                  cGTCGATATGGATCGCGAACGCGCCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCat                                     <  1:1911167/93‑1 (MQ=255)

                                                  cGTCGATATGGATCGCGAACGCACCCAGGTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCat                                     >  2:2954324/1‑93 (MQ=255)

                                                      gATATGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCatgatg                                 >  2:2869238/1‑93 (MQ=255)

                                                       atatGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTTAGCGGGCAAATCAAAGGCAtgatga                                >  2:1406008/1‑93 (MQ=255)

                                                       atatGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCAtgatga                                <  1:3990343/93‑1 (MQ=255)

                                                        tatGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGaa                               <  2:396187/93‑1 (MQ=255)

                                                        tatGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGaa                               >  1:4068029/1‑93 (MQ=255)

                                                        tatGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGaa                               >  1:230183/1‑93 (MQ=255)

                                                         atGGATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAAc                              <  2:983355/93‑1 (MQ=255)

                                                            gATCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGtt                           <  1:2103542/93‑1 (MQ=255)

                                                              tCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGtttt                         <  1:159821/93‑1 (MQ=255)

                                                              tCGCGAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGtttt                         >  1:2077532/1‑93 (MQ=255)

                                                                gcgAACGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTAc                       >  2:436927/1‑93 (MQ=255)

                                                                   aaCGCACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACaga                    <  1:4432629/93‑1 (MQ=255)

                                                                       cACCCAGTTTGCCGATAAGGGCCTGCAATACCAGATGAGCCTTAGCGAGGTGAGCGGGCAGATCAAAGGCATGATGAACGGTTTACAGAGCgg                >  1:2017149/1‑93 (MQ=255)

                                                                       cACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCgg                <  1:3923530/93‑1 (MQ=255)

                                                                       cACCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCgg                <  1:3940462/93‑1 (MQ=255)

                                                                        aCCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCgta               <  2:2451662/93‑3 (MQ=255)

                                                                        aCCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGa               >  1:3070506/1‑93 (MQ=255)

                                                                        aCCCAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGa               >  1:2935951/1‑93 (MQ=255)

                                                                        aCCCAGTTTGCCGATAACGGCATGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGa               >  2:2983343/1‑93 (MQ=255)

                                                                         cccAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGaa              >  2:4252063/1‑93 (MQ=255)

                                                                          ccAGTTTGCCGATAACGGCCTGCAATCCCAGATGAGCCTTAGCGCGTGGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGaaat             <  2:2076714/93‑2 (MQ=255)

                                                                          ccAGTTTGCCGATAACGGCCTGCAATACCATATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAAAGTTTTACAGAGCGGaaa             >  1:4458645/1‑93 (MQ=255)

                                                                          ccAGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGaaa             <  2:206632/93‑1 (MQ=255)

                                                                          caaGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGaaa             <  1:2986569/91‑1 (MQ=255)

                                                                            aGTTTGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAAtt           <  2:3954075/93‑1 (MQ=255)

                                                                              tttGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTaa         <  1:3638797/93‑1 (MQ=255)

                                                                              tttGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTaa         <  1:4674512/93‑1 (MQ=255)

                                                                               ttGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAAc        <  2:4576870/93‑1 (MQ=255)

                                                                               ttGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAAc        <  1:1001175/93‑1 (MQ=255)

                                                                                tGCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACg       <  1:4320862/93‑1 (MQ=255)

                                                                                 gCCGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACgg      <  1:3433860/93‑1 (MQ=255)

                                                                                  ccGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGa     >  2:4041986/1‑93 (MQ=255)

                                                                                  ccGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGa     <  2:2330627/93‑1 (MQ=255)

                                                                                  ccGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGa     <  1:12367/93‑1 (MQ=255)

                                                                                   cGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGAt    >  2:4093511/1‑93 (MQ=255)

                                                                                   cGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGAt    <  2:502374/93‑1 (MQ=255)

                                                                                   cGATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGAt    <  1:2555478/93‑1 (MQ=255)

                                                                                    gATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGATg   <  2:2284569/93‑1 (MQ=255)

                                                                                    gATAACGGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGATg   <  2:64099/93‑1 (MQ=255)

GCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAACGGATGG  >  NC_000913/1130487‑1130664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`