BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,136,396	A→G	G301G (GGA→GGG)	flgI →	FlgI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,136,396	0	A	G	100.0%	394.6 / NA	124	G301G (GGA→GGG)	flgI	FlgI
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (75/49); total (75/49)

Only 100 of 126 total aligned reads displayed.

ACAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGACAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAATAA  >  NC_000913/1136308‑1136485

aCAGCTGCGCGGTGGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGa                                                                                       >  2:4603811/1‑93 (MQ=255)

aCAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGa                                                                                       >  1:264327/1‑93 (MQ=255)

 cAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGAc                                                                                      <  1:3688661/93‑1 (MQ=255)

   gCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACtg                                                                                    >  1:62478/1‑93 (MQ=255)

   gCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACtg                                                                                    >  1:113396/1‑93 (MQ=255)

   gCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACtg                                                                                    >  1:1287276/1‑93 (MQ=255)

   gCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACtg                                                                                    >  1:2072112/1‑93 (MQ=255)

     tGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACtgtg                                                                                  <  2:1601156/93‑1 (MQ=255)

       cgcgGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGt                                                                                <  2:502269/93‑1 (MQ=255)

             aGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTcc                                                                          <  2:2691903/93‑1 (MQ=255)

              gcgcAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCca                                                                         >  2:4326194/1‑93 (MQ=255)

               cgcAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCcac                                                                        <  1:4683856/93‑1 (MQ=255)

                  aGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACaaa                                                                     >  2:3392504/1‑93 (MQ=255)

                  aGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACaaa                                                                     <  2:4360851/93‑1 (MQ=255)

                   ggggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAAc                                                                    >  2:2939646/1‑93 (MQ=255)

                   ggggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAAc                                                                    >  2:4380782/1‑93 (MQ=255)

                   ggggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAAc                                                                    >  2:3123225/1‑93 (MQ=255)

                    gggAATCTCTCAGTAGCAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACg                                                                   <  1:2860808/93‑1 (MQ=255)

                    gggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACg                                                                   >  1:2432173/1‑93 (MQ=255)

                    gggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACg                                                                   >  2:4226985/1‑93 (MQ=255)

                    gggAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACg                                                                   >  1:2934928/1‑93 (MQ=255)

                      gAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCa                                                                 >  2:3109508/1‑93 (MQ=255)

                      gAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCa                                                                 >  2:3635563/1‑93 (MQ=255)

                      gAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCa                                                                 <  2:4243045/93‑1 (MQ=255)

                      gAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGGCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCa                                                                 <  1:1542218/93‑1 (MQ=255)

                       aaTCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCCGCCAGATACACCGTTTGGTGGTGGGCAGAATGTGGTTACTCCACAAACGCAg                                                                >  2:1187125/1‑93 (MQ=255)

                        aTCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGa                                                               >  2:1450781/1‑93 (MQ=255)

                         tctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGAt                                                              <  2:501206/93‑1 (MQ=255)

                         tctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGAt                                                              >  1:1029037/1‑93 (MQ=255)

                         tctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGAt                                                              >  1:3874274/1‑93 (MQ=255)

                         tctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGAt                                                              >  1:1056020/1‑93 (MQ=255)

                         tctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGAt                                                              <  2:2171496/93‑1 (MQ=255)

                          ctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATc                                                             <  1:2727843/93‑1 (MQ=255)

                          ctctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATc                                                             <  1:609648/93‑1 (MQ=255)

                           tctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCg                                                            >  1:712634/1‑93 (MQ=255)

                            ctcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGa                                                           >  1:3994388/1‑93 (MQ=255)

                             tcAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGAt                                                          <  1:1020636/93‑1 (MQ=255)

                              cAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGAtt                                                         <  1:528509/93‑1 (MQ=255)

                              cAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGAtt                                                         <  2:1313244/93‑1 (MQ=255)

                              cAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGAtt                                                         <  1:1252883/93‑1 (MQ=255)

                               aGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGAttt                                                        >  2:4115156/1‑93 (MQ=255)

                                gTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTa                                                       <  2:3698173/93‑1 (MQ=255)

                                gTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTa                                                       >  2:4249621/1‑93 (MQ=255)

                                 tAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTAc                                                      <  2:2408110/93‑1 (MQ=255)

                                 tAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTAc                                                      >  2:546048/1‑93 (MQ=255)

                                 tAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTAc                                                      >  2:685863/1‑93 (MQ=255)

                                    cAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGcc                                                   >  2:2501635/1‑93 (MQ=255)

                                     aGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCa                                                  <  1:2555761/93‑1 (MQ=255)

                                     aGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCa                                                  >  2:1575578/1‑93 (MQ=255)

                                      gTTAATCGTCAGGCCAATGTGAGCCAGCCAGATACAGCGTTTGGTGGTGGTCAGACGGTGGTTAGTCCACAAACGCAGATTGAATTACGCCag                                                 >  2:2168033/1‑93 (MQ=255)

                                      gTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCag                                                 >  1:3040129/1‑93 (MQ=255)

                                      gTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCag                                                 >  2:2991311/1‑93 (MQ=255)

                                      gTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCag                                                 >  1:4268667/1‑93 (MQ=255)

                                       ttAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCaga                                                <  2:79263/93‑1 (MQ=255)

                                         aaTCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgc                                              >  2:3381489/1‑93 (MQ=255)

                                         aaTCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgc                                              <  2:3822379/93‑1 (MQ=255)

                                          aTCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgcg                                             <  2:149547/93‑1 (MQ=255)

                                             gTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgcggcg                                          <  1:2270886/93‑1 (MQ=255)

                                             gTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAgcggcg                                          >  1:4524629/1‑93 (MQ=255)

                                              tCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGGGGGTACTCCACAAACGAAGATCGATTTACGCCAGAGcggcgg                                         >  2:3662019/1‑93 (MQ=255)

                                              tCAGGCCAATGTCAGCCAGCCAGATACACCGCTTGGTGGTGGGCACACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGcggcgg                                         >  2:2325370/1‑93 (MQ=255)

                                               cAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGt                                        <  2:3095440/93‑1 (MQ=255)

                                                aGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGtt                                       >  2:3228124/1‑93 (MQ=255)

                                                aGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGtt                                       >  2:3326645/1‑93 (MQ=255)

                                                 ggCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGGTc                                      >  2:4260093/1‑93 (MQ=255)

                                                  gCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCg                                     >  2:2166262/1‑93 (MQ=255)

                                                   ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                    >  2:855616/1‑93 (MQ=255)

                                                   ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                    <  2:2703191/93‑1 (MQ=255)

                                                   ccAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGc                                    >  2:1573291/1‑93 (MQ=255)

                                                     aaTGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGNTCNATTTACGCCAGAGCGNGNGGTCGCTg                                  >  2:4084829/1‑93 (MQ=255)

                                                     aaTGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTg                                  >  1:2190090/1‑93 (MQ=255)

                                                     aaTGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTg                                  >  1:147561/1‑93 (MQ=255)

                                                     aaTGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGGTCGCTg                                  >  2:2698032/1‑93 (MQ=255)

                                                      aTGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTtgctgc                                 >  1:1694361/1‑93 (MQ=255)

                                                       tGTCAGCCAGCCAGATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCa                                >  1:1014640/1‑93 (MQ=255)

                                                         tCAGCCAGCCAGATACCCCGTTTTGTGGTGGGCAGACTGTGGTTGCTCCACAAACGCGGATCGATTTACGCCAGAGCGGCGGTTCGCTGCaaa                              <  2:1132056/93‑1 (MQ=255)

                                                             ccagccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGt                          <  2:2612475/93‑1 (MQ=255)

                                                              cagccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTa                         >  2:1751562/1‑93 (MQ=255)

                                                              cagccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTa                         <  2:3059228/93‑1 (MQ=255)

                                                              cagccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTa                         <  1:2226764/93‑1 (MQ=255)

                                                              cagccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTa                         <  1:2764444/93‑1 (MQ=255)

                                                               agccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGGTCGCTGCCAAGCGGAc                        >  2:626794/1‑93 (MQ=255)

                                                                gccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACg                       <  1:4315892/93‑1 (MQ=255)

                                                                gccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACg                       <  1:4084267/93‑1 (MQ=255)

                                                                gccagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACg                       >  2:4039631/1‑93 (MQ=255)

                                                                  cagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGGGTACGtt                     >  2:2800675/1‑93 (MQ=255)

                                                                  cagATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGtt                     <  1:3614749/93‑1 (MQ=255)

                                                                    gATACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTcc                   <  2:1171672/93‑1 (MQ=255)

                                                                      tACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAg                 >  1:2765161/1‑93 (MQ=255)

                                                                      tACACCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGAGGTTTGCTGCAAAGCGTACGTTCCac                 >  1:174723/1‑92 (MQ=255)

                                                                       acacCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGGCGCAAAGCGTGCCTTCCAgc                >  2:2820895/1‑93 (MQ=255)

                                                                         acCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAgcgc              >  1:3560517/1‑93 (MQ=255)

                                                                         acCGTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAgcgc              >  2:1078008/1‑93 (MQ=255)

                                                                            gTTTGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAg           >  1:469379/1‑93 (MQ=255)

                                                                             tttGGTGGTGGGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGc          >  1:1282011/1‑93 (MQ=255)

                                                                                 gtggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCa      <  1:699484/93‑1 (MQ=255)

                                                                                   ggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAAt    <  2:2233069/93‑1 (MQ=255)

                                                                                   ggtggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGNNAGTTCCAGCGCCAGNCTCNAt    >  1:2019705/1‑93 (MQ=255)

                                                                                     tggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAATaa  <  1:2060252/93‑1 (MQ=255)

                                                                                     tggGCAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGGTCCAGCGCCAGCCTCAATaa  >  2:4138599/1‑93 (MQ=255)

ACAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGACAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAATAA  >  NC_000913/1136308‑1136485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`