BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,145,923	T→C	intergenic (‑66/‑94)	yceF ← / → yceD	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,145,923	0	T	C	100.0%	416.3 / NA	131	intergenic (‑66/‑94)	yceF/yceD	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/65); total (66/65)

Only 100 of 136 total aligned reads displayed.

GATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCG  >  NC_000913/1145833‑1146010

gATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCaa                                                                                       <  1:2093924/93‑1 (MQ=255)

catatAGCGGGTTAATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGCTTGATCATTGTTATCAGCACTGAACGAAAATAAACCAGCaa                                                                                       >  2:2300248/2‑93 (MQ=255)

 atatAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAc                                                                                      <  1:2361215/93‑1 (MQ=255)

 atatAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAc                                                                                      <  2:1341529/93‑1 (MQ=255)

 atatAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAc                                                                                      <  2:2413942/93‑1 (MQ=255)

  tataGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAAcc                                                                                     >  1:202250/1‑93 (MQ=255)

     aGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGGTTTGCAGGGTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGc                                                                                  >  1:4276360/1‑93 (MQ=255)

      gCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCa                                                                                 >  1:3536602/1‑93 (MQ=255)

       cGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCaa                                                                                <  1:3095165/93‑1 (MQ=255)

       cGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCaa                                                                                <  2:759178/93‑1 (MQ=255)

          aTTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgt                                                                             <  1:3439057/93‑1 (MQ=255)

          aTTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgt                                                                             <  2:984522/93‑1 (MQ=255)

           ttGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtg                                                                            >  1:4327760/1‑93 (MQ=255)

           ttGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtg                                                                            >  1:896193/1‑93 (MQ=255)

           ttGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtg                                                                            <  1:3547824/93‑1 (MQ=255)

             gatgatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAAtgtgtg                                                                          >  2:1682871/1‑93 (MQ=255)

              atgatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGc                                                                         <  2:782738/93‑1 (MQ=255)

              atgatAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGc                                                                         <  2:4295474/93‑1 (MQ=255)

                  tAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAat                                                                     >  2:4081269/1‑93 (MQ=255)

                  tAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGAAATGTGTGCGAat                                                                     >  1:300382/1‑93 (MQ=255)

                   aGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAatt                                                                    >  2:2095036/1‑93 (MQ=255)

                   aGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAatt                                                                    <  2:922625/93‑1 (MQ=255)

                    gCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAatta                                                                   <  2:464755/93‑1 (MQ=255)

                    gCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAatta                                                                   <  2:68908/93‑1 (MQ=255)

                     ccATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAattat                                                                  >  2:4206827/1‑93 (MQ=255)

                     ccATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAattat                                                                  <  1:1814632/93‑1 (MQ=255)

                      cATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAattatt                                                                 >  2:2101460/1‑93 (MQ=255)

                      cATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAattatt                                                                 >  2:1879231/1‑93 (MQ=255)

                       aTTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTg                                                                <  2:1339415/93‑1 (MQ=255)

                        ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg                                                               >  2:3493339/1‑93 (MQ=255)

                        ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg                                                               >  2:1030637/1‑93 (MQ=255)

                        ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg                                                               >  2:2538289/1‑93 (MQ=255)

                        ttttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTgg                                                               >  2:4635140/1‑93 (MQ=255)

                          ttAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCa                                                             >  2:3010098/1‑93 (MQ=255)

                           tAAACTATGCGCTTCGTTTTGCAGGGTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaa                                                            >  2:3397129/1‑93 (MQ=255)

                             aaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaaa                                                          <  1:2737638/93‑1 (MQ=255)

                             aaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaaa                                                          <  2:1071320/93‑1 (MQ=255)

                             aaCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCaaaa                                                          <  1:4160094/93‑1 (MQ=255)

                              aCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAg                                                         >  1:413455/1‑93 (MQ=255)

                              aCTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAg                                                         <  2:53314/93‑1 (MQ=255)

                               cTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAgg                                                        >  2:379730/1‑93 (MQ=255)

                                tATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGc                                                       >  1:3235218/1‑93 (MQ=255)

                                 aTGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCa                                                      >  2:885521/1‑93 (MQ=255)

                                  tGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCACCCCGCAATGTGTGCGAATTATTGGCAAAAGGCaa                                                     <  1:387758/93‑1 (MQ=255)

                                  tGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCaa                                                     <  2:717403/93‑1 (MQ=255)

                                  tGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCaa                                                     >  1:17414/1‑93 (MQ=255)

                                     gcTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACca                                                  >  1:3258916/1‑93 (MQ=255)

                                       ttCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACcaca                                                <  2:1010447/93‑1 (MQ=255)

                                        tCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAg                                               >  1:3982266/1‑93 (MQ=255)

                                        tCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAg                                               <  2:4192041/93‑1 (MQ=255)

                                          gTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGc                                             >  2:486205/1‑93 (MQ=255)

                                              tGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGcc                                         <  2:2302619/93‑1 (MQ=255)

                                               gCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCt                                        <  1:596171/93‑1 (MQ=255)

                                                cAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtt                                       <  2:3995615/93‑1 (MQ=255)

                                                cAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtt                                       <  2:1527660/93‑1 (MQ=255)

                                                cAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtt                                       <  1:2351544/93‑1 (MQ=255)

                                                 aGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttt                                      >  2:2495399/1‑93 (MQ=255)

                                                  ggTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtttt                                     >  1:1809363/1‑93 (MQ=255)

                                                  ggTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCtttt                                     <  2:4353561/93‑1 (MQ=255)

                                                   gTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttttt                                    >  2:371495/1‑93 (MQ=255)

                                                   gTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCttttt                                    >  1:4481214/1‑93 (MQ=255)

                                                    ttGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTc                                   >  1:4149888/1‑93 (MQ=255)

                                                    ttGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTc                                   <  2:3337807/93‑1 (MQ=255)

                                                         gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa                              >  2:4248973/1‑93 (MQ=255)

                                                         gtttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGa                              <  1:3643209/93‑1 (MQ=255)

                                                          tttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAc                             <  1:1119298/93‑1 (MQ=255)

                                                          tttgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAc                             <  2:3615476/93‑1 (MQ=255)

                                                            tgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGActc                           <  1:1203817/93‑1 (MQ=255)

                                                            tgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGActc                           >  1:3766665/1‑93 (MQ=255)

                                                            tgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGActc                           <  2:2648250/93‑1 (MQ=255)

                                                            tgttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGAcac                           <  2:2957721/93‑3 (MQ=255)

                                                             gttATCAGCACTGAACGAAAATAAAGCAGCGACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGActct                          <  1:3579904/93‑1 (MQ=255)

                                                             gttATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGActct                          >  2:1073614/1‑93 (MQ=255)

                                                               tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt                        <  1:3446122/93‑1 (MQ=255)

                                                               tATCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTAt                        <  1:1699860/93‑1 (MQ=255)

                                                                 tCAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGa                      >  2:398701/1‑93 (MQ=255)

                                                                  cAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGAc                     >  2:3710089/1‑93 (MQ=255)

                                                                  cAGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGAc                     <  1:991507/93‑1 (MQ=255)

                                                                   aGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACg                    >  2:3077337/1‑93 (MQ=255)

                                                                   aGCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACg                    <  2:4494366/93‑1 (MQ=255)

                                                                    gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGTGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt                   >  1:943478/1‑93 (MQ=255)

                                                                    gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt                   >  1:3289515/1‑93 (MQ=255)

                                                                    gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt                   >  2:3857740/1‑93 (MQ=255)

                                                                    gCACTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGt                   >  1:3364677/1‑93 (MQ=255)

                                                                       cTGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTAc                <  2:251678/93‑1 (MQ=255)

                                                                        tGAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACa               >  2:4069824/1‑93 (MQ=255)

                                                                         gAACGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaa              <  1:991811/93‑1 (MQ=255)

                                                                          aaCGACAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACaaa             <  1:1929304/93‑1 (MQ=255)

                                                                           aCGAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAg            >  1:1248462/1‑93 (MQ=255)

                                                                             gAAAATAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGtt          >  2:3743893/1‑93 (MQ=255)

                                                                               aaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTaa        >  1:3647647/1‑93 (MQ=255)

                                                                               aaaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTaa        >  2:538254/1‑93 (MQ=255)

                                                                                aaTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAat       >  2:949824/1‑93 (MQ=255)

                                                                                 aTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAata      <  1:438227/93‑1 (MQ=255)

                                                                                 aTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAata      >  1:1873985/1‑93 (MQ=255)

                                                                                 aTAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAata      <  2:1688463/93‑1 (MQ=255)

                                                                                  tAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAatat     <  1:864465/93‑1 (MQ=255)

                                                                                  tAAAGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAatat     <  1:1698443/93‑1 (MQ=255)

                                                                                    aaGCAGCAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgc   >  2:2266415/1‑93 (MQ=255)

                                                                                     agcagcAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATgcg  <  2:4469735/93‑1 (MQ=255)

GATATAGCGTATTGATGATAGCCATTTTAAACTATGCGCTTCGTTTTGCAGGTTGATGTTTGTTATCAGCACTGAACGAAAATAAAGCAGTAACCCGCAATGTGTGCGAATTATTGGCAAAAGGCAACCACAGGCTGCCTTTTTCTTTGACTCTATGACGTTACAAAGTTAATATGCG  >  NC_000913/1145833‑1146010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`