BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,168,777	A→G	L274P (CTG→CCG)	ycfS ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,168,777	0	A	G	100.0%	342.7 / NA	109	L274P (CTG→CCG)	ycfS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (58/51); total (58/51)

Only 100 of 121 total aligned reads displayed.

GAACGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCAGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACTTTTATC  >  NC_000913/1168687‑1168866

gAACGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTggcggc                                                                                         >  1:3694072/1‑93 (MQ=255)

gAACGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTggcggc                                                                                         >  2:4056008/1‑93 (MQ=255)

  aCGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGcggcag                                                                                       >  1:2842106/1‑93 (MQ=255)

   cGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCggcagc                                                                                      <  1:523203/93‑1 (MQ=255)

   cGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCggcagc                                                                                      <  1:841653/93‑1 (MQ=255)

   cGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCggcagc                                                                                      <  1:3952568/93‑1 (MQ=255)

   cGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCggcagc                                                                                      <  2:2286403/93‑1 (MQ=255)

   cGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCggcagc                                                                                      <  2:4640413/93‑1 (MQ=255)

      aCATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGc                                                                                   <  1:2132650/93‑1 (MQ=255)

        atccatcACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCgg                                                                                 <  1:2581522/93‑1 (MQ=255)

        atccatcACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCgg                                                                                 >  1:240012/1‑93 (MQ=255)

         tccatcACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGa                                                                                >  1:1437768/1‑93 (MQ=255)

         tccatcACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGa                                                                                <  1:3227516/93‑1 (MQ=255)

         tccatcACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGa                                                                                >  1:866423/1‑93 (MQ=255)

          ccatcACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGAt                                                                               <  2:3583719/93‑1 (MQ=255)

            atcACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCg                                                                             >  2:1567791/1‑93 (MQ=255)

              cacaTGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGtc                                                                           <  1:2957051/93‑1 (MQ=255)

               acaTGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGtca                                                                          >  1:1079064/1‑93 (MQ=255)

               acaTGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGtca                                                                          >  1:1164017/1‑93 (MQ=255)

                caTGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGtcat                                                                         <  1:716519/93‑1 (MQ=255)

                        aTCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAAtcttc                                                                 <  1:914926/93‑1 (MQ=255)

                        aTCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAAtcttc                                                                 <  2:1185477/93‑1 (MQ=255)

                        aTCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAAtcttc                                                                 <  2:2402501/93‑1 (MQ=255)

                        aTCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAAtcttc                                                                 >  1:1241510/1‑93 (MQ=255)

                          cACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTtctc                                                               <  1:2221012/93‑1 (MQ=255)

                          cACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTtctc                                                               >  1:1666197/1‑93 (MQ=255)

                          cACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTtctc                                                               <  1:1075590/93‑1 (MQ=255)

                             ttCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGa                                                            >  2:790617/1‑93 (MQ=255)

                              tCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGAc                                                           >  1:448004/1‑93 (MQ=255)

                                aGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAg                                                         <  2:2816597/93‑1 (MQ=255)

                                 gCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGc                                                        <  2:511057/93‑1 (MQ=255)

                                 gCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGc                                                        <  2:154646/93‑1 (MQ=255)

                                   gTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCgg                                                      >  1:825035/1‑93 (MQ=255)

                                   gTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCgg                                                      >  2:2592007/1‑93 (MQ=255)

                                   gTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCgg                                                      <  1:3505448/93‑1 (MQ=255)

                                   gTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCgg                                                      <  1:3505447/93‑1 (MQ=255)

                                    tCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGc                                                     >  2:2748884/1‑93 (MQ=255)

                                    tCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGc                                                     >  2:4303678/1‑93 (MQ=255)

                                     cAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCt                                                    <  1:560201/93‑1 (MQ=255)

                                      aGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTg                                                   >  1:1350858/1‑93 (MQ=255)

                                      aGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTg                                                   >  2:4510409/1‑93 (MQ=255)

                                        tttGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGAt                                                 >  1:3272511/1‑93 (MQ=255)

                                        tttGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGAt                                                 <  1:3599838/93‑1 (MQ=255)

                                        tttGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGAt                                                 >  1:3941740/1‑93 (MQ=255)

                                          tgtgCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGt                                               >  2:1021980/1‑93 (MQ=255)

                                           gtgCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTa                                              >  1:2744947/1‑93 (MQ=255)

                                           gtgCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTa                                              >  1:4345957/1‑93 (MQ=255)

                                            tgctgcATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTAc                                             <  1:1913046/93‑1 (MQ=255)

                                             gctgcATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACt                                            >  1:2798452/1‑93 (MQ=255)

                                              ctgcATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACtt                                           <  1:4137370/93‑1 (MQ=255)

                                               tgcATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTc                                          >  2:3238760/1‑93 (MQ=255)

                                               tgcATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTc                                          >  2:3968528/1‑93 (MQ=255)

                                                 cATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCaa                                        <  1:2258829/93‑1 (MQ=255)

                                                 cATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCaa                                        <  2:2943604/93‑1 (MQ=255)

                                                 cATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCaa                                        >  2:779976/1‑93 (MQ=255)

                                                  aTCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAAc                                       >  1:140763/1‑93 (MQ=255)

                                                    cTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCa                                     >  1:62043/1‑93 (MQ=255)

                                                     tttAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAg                                    >  1:602080/1‑93 (MQ=255)

                                                     tttAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAg                                    >  1:1270859/1‑93 (MQ=255)

                                                      ttAAATGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGa                                   <  2:2769316/93‑1 (MQ=255)

                                                         aaTGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGAcgc                                >  1:1580144/1‑93 (MQ=255)

                                                          aTGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGCcgcg                               >  2:1123292/1‑93 (MQ=255)

                                                           tGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACgcgc                              <  1:4483083/93‑1 (MQ=255)

                                                           tGATTGCATTGCGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATATTCTCTGACAGCGGCTGATGTAGTTCAACCAGACgcgc                              >  2:1450156/1‑93 (MQ=255)

                                                             attgcattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCAc                            >  1:4441783/1‑93 (MQ=255)

                                                             attgcattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCAc                            <  1:1566392/93‑1 (MQ=255)

                                                              ttgcattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCAcc                           <  2:706391/93‑1 (MQ=255)

                                                              ttgcattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCAcc                           <  1:2088999/93‑1 (MQ=255)

                                                                gcattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGt                         <  2:3089776/93‑1 (MQ=255)

                                                                 cattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGtt                        <  1:2977368/93‑1 (MQ=255)

                                                                 cattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGtt                        <  1:309891/93‑1 (MQ=255)

                                                                 cattgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGtt                        >  1:3895447/1‑93 (MQ=255)

                                                                  attgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGttt                       >  1:4442245/1‑93 (MQ=255)

                                                                   ttgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTg                      >  1:3111693/1‑93 (MQ=255)

                                                                   ttgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTg                      >  2:3429202/1‑93 (MQ=255)

                                                                    tgcGCTATTCAGCGTAATTGGCGGCAGCTGCGGATTGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTgg                     >  2:142808/1‑93 (MQ=255)

                                                                     gcgcTATTCAGCGTAATTGGAGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGt                    >  2:4583378/1‑93 (MQ=255)

                                                                       gcTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTc                  <  2:2746276/93‑1 (MQ=255)

                                                                        cTATTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCg                 >  1:4638905/1‑93 (MQ=255)

                                                                          aTTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGc               >  2:4086919/1‑93 (MQ=255)

                                                                          aTTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGc               >  2:3731133/1‑93 (MQ=255)

                                                                          aTTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGc               >  1:2713940/1‑93 (MQ=255)

                                                                          aTTCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGGTCGGc               >  2:3978983/1‑93 (MQ=255)

                                                                           ttCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCa              >  1:210631/1‑93 (MQ=255)

                                                                            tCAGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCag             >  1:3631280/1‑93 (MQ=255)

                                                                              aGCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCagag           >  2:3748762/1‑93 (MQ=255)

                                                                               gCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAgaga          <  2:3736834/93‑1 (MQ=255)

                                                                               gCGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAgaga          >  2:3862241/1‑93 (MQ=255)

                                                                                cGTAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGAc         <  1:1753276/93‑1 (MQ=255)

                                                                                  tAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACtt       <  1:2528585/93‑1 (MQ=255)

                                                                                  tAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACtt       >  1:394951/1‑93 (MQ=255)

                                                                                  tAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACtt       <  1:1956061/93‑1 (MQ=255)

                                                                                  tAATTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACtt       <  2:756555/93‑1 (MQ=255)

                                                                                   aaTTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACttt      <  1:1198936/93‑1 (MQ=255)

                                                                                   aaTTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACttt      <  1:1119720/93‑1 (MQ=255)

                                                                                   aaTGGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACttt      <  1:3260558/93‑1 (MQ=255)

                                                                                    aTTGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACtttt     <  2:1009980/93‑1 (MQ=255)

                                                                                     ttGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACttttt    >  2:1234068/1‑92 (MQ=255)

                                                                                     ttGGCGGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACTTTTa    <  1:1631572/93‑1 (MQ=255)

                                                                                       ggcggcAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACTTTTATc  <  1:3102042/93‑1 (MQ=255)

GAACGGACATCCATCACATGTTGCATCACTTCAGCGTCAGTTTGTGCTGCATCTTTAAATGATTGCATTGCGCTATTCAGCGTAATTGGCAGCAGCTGCGGATCGTCATCAATCTTCTCTGACAGCGGCTGATGTACTTCAACCAGACGCGCACCGTTTGGTTCGGCAGAGACTTTTATC  >  NC_000913/1168687‑1168866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`