BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,186,123	C→T	R353C (CGC→TGC)	pepT →	putative peptidase T

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,186,123	0	C	T	100.0%	402.4 / NA	111	R353C (CGC→TGC)	pepT	putative peptidase T
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (59/52); total (59/52)

Only 100 of 115 total aligned reads displayed.

GCGAGAAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCCGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCA  >  NC_000913/1186034‑1186211

gcgAGAAAGTGGGTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCtgcg                                                                                       >  2:1162343/1‑93 (MQ=255)

 cgAGAAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCgg                                                                                      <  2:885000/93‑1 (MQ=255)

 cgAGAAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCgg                                                                                      >  2:438722/1‑93 (MQ=255)

  gagaAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCggt                                                                                     >  2:532981/1‑93 (MQ=255)

  gagaAAGTGGTTGAGCATCCGCATATGCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCggt                                                                                     <  1:922670/93‑1 (MQ=255)

   agaAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCggtg                                                                                    >  1:3924813/1‑93 (MQ=255)

    gaAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCggtgg                                                                                   >  1:2307390/1‑93 (MQ=255)

    gaAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCggtgg                                                                                   >  1:2357055/1‑93 (MQ=255)

    gaAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCggtgg                                                                                   >  1:2219197/1‑93 (MQ=255)

    gaAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCggtgg                                                                                   <  1:1214783/93‑1 (MQ=255)

      aaGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTa                                                                                 >  1:265386/1‑93 (MQ=255)

       aGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTAc                                                                                <  2:1827372/93‑1 (MQ=255)

       aGTGGTGGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTAc                                                                                <  2:1445125/93‑1 (MQ=255)

        gTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTAcc                                                                               >  2:2973957/1‑93 (MQ=255)

          ggTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGa                                                                             <  2:2848262/93‑1 (MQ=255)

          ggTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGa                                                                             <  1:4284491/93‑1 (MQ=255)

          ggTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGa                                                                             >  2:4501130/1‑93 (MQ=255)

           gTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGAc                                                                            >  1:503688/1‑93 (MQ=255)

            ttGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACg                                                                           <  2:101281/93‑1 (MQ=255)

            ttGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACg                                                                           >  2:452356/1‑93 (MQ=255)

              gAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGgc                                                                         >  2:205085/1‑93 (MQ=255)

               aGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGgcg                                                                        >  2:209533/1‑93 (MQ=255)

                  aTCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGgcgcgc                                                                     <  1:2542587/93‑1 (MQ=255)

                   tCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCa                                                                    >  2:4464350/1‑93 (MQ=255)

                   tCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCa                                                                    <  1:4429729/93‑1 (MQ=255)

                   tCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCa                                                                    >  2:159485/1‑93 (MQ=255)

                    ccGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAg                                                                   <  2:827020/93‑1 (MQ=255)

                     cGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGt                                                                  <  2:1943595/93‑1 (MQ=255)

                      gCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGtt                                                                 >  2:2535247/1‑93 (MQ=255)

                        atatTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGt                                                               <  1:2959171/93‑1 (MQ=255)

                        atatTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGt                                                               >  1:2257264/1‑93 (MQ=255)

                        atatTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGt                                                               <  1:69845/93‑1 (MQ=255)

                         tatTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTc                                                              >  2:119369/1‑93 (MQ=255)

                         tatTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTc                                                              >  2:2629426/1‑93 (MQ=255)

                         tatTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTc                                                              >  2:2708369/1‑93 (MQ=255)

                          atTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGATGTCg                                                             >  2:706633/1‑93 (MQ=255)

                           ttCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGt                                                            >  1:3986901/1‑93 (MQ=255)

                           ttCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGt                                                            >  2:3600636/1‑93 (MQ=255)

                            tctcGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGtt                                                           <  1:3367970/93‑1 (MQ=255)

                            tctcGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGtt                                                           <  1:158793/93‑1 (MQ=255)

                            tctcGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGAACTGCGGTGGTACCGACGGCGCGCAGTTGTCGtt                                                           >  1:4479257/1‑93 (MQ=255)

                              tcGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTa                                                         >  2:1605390/1‑93 (MQ=255)

                                gATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATg                                                       <  1:3253463/93‑1 (MQ=255)

                                gATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATg                                                       >  2:3811283/1‑93 (MQ=255)

                                 atatCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATgg                                                      >  2:3970976/1‑93 (MQ=255)

                                  tatCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACTGACGGCGCGCAGTTGTAGTTTATggg                                                     >  1:4435115/1‑93 (MQ=255)

                                  tatCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATggg                                                     <  2:2812894/93‑1 (MQ=255)

                                  tatCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATggg                                                     >  1:383566/1‑93 (MQ=255)

                                     cGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGAtt                                                  <  2:3411480/93‑1 (MQ=255)

                                      gCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTa                                                 >  1:538076/1‑93 (MQ=255)

                                      gCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTa                                                 <  2:1348923/93‑1 (MQ=255)

                                       cccAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAACCCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTAc                                                <  1:2685712/93‑1 (MQ=255)

                                       cccAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTAc                                                >  1:2296863/1‑93 (MQ=255)

                                        ccAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTAcc                                               >  2:2857287/1‑93 (MQ=255)

                                        ccAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTAcc                                               <  1:1979497/93‑1 (MQ=255)

                                           gcagGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTg                                            >  1:361287/1‑93 (MQ=255)

                                             agGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGGACCGACGGCGCGCAGTTGTCGTTTATGGGATTTCCGTgac                                          >  1:1002525/1‑91 (MQ=255)

                                                  aTGCGCGATTGCGATATTGAGCCGGAACTGAAACCGATCTGCGGTGGTACCGCCGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAAc                                     <  1:2763041/93‑1 (MQ=255)

                                                   tGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAAcc                                    <  1:2639939/93‑1 (MQ=255)

                                                   tGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAAcc                                    <  1:4608140/93‑1 (MQ=255)

                                                        gATTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTc                               <  1:1342009/93‑1 (MQ=255)

                                                         aTTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCa                              <  1:4336707/93‑1 (MQ=255)

                                                         aTTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCa                              >  2:2392213/1‑93 (MQ=255)

                                                         aTTGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCa                              >  1:1605107/1‑93 (MQ=255)

                                                          ttGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCAc                             <  2:423962/93‑1 (MQ=255)

                                                          ttGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCAc                             <  1:362133/93‑1 (MQ=255)

                                                          ttGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCAc                             >  1:1804892/1‑93 (MQ=255)

                                                           tGCGATATTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACt                            <  1:3257317/93‑1 (MQ=255)

                                                               atatTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCg                        >  1:3104480/1‑93 (MQ=255)

                                                               atatTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCg                        >  1:582250/1‑93 (MQ=255)

                                                               atatTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCg                        >  1:3912494/1‑93 (MQ=255)

                                                               atatTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGACTACCGTGCCCGAACCTGTTCACTGGCg                        >  1:1670598/1‑93 (MQ=255)

                                                               acatTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCg                        >  2:4618852/3‑93 (MQ=255)

                                                                tatTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCgg                       >  2:3102191/1‑93 (MQ=255)

                                                                 atTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCTCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGt                      <  2:131974/93‑1 (MQ=255)

                                                                 atTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGt                      <  2:2779629/93‑1 (MQ=255)

                                                                 atTGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGt                      >  1:2947309/1‑93 (MQ=255)

                                                                  ttGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATTGGATTACCGTGCCCGAACCTGTTCACTGGCGGtt                     >  2:607324/1‑93 (MQ=255)

                                                                   tGAACCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTa                    <  1:271834/93‑1 (MQ=255)

                                                                     aaCCGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACa                  >  1:2048887/1‑93 (MQ=255)

                                                                       ccGGAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAAc                <  1:2244991/93‑1 (MQ=255)

                                                                         ggAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTa              <  2:4272158/93‑1 (MQ=255)

                                                                         ggAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTa              <  1:4463727/93‑1 (MQ=255)

                                                                          gAACTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTAt             >  1:4021569/1‑93 (MQ=255)

                                                                            aCTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCa           >  2:1998893/1‑93 (MQ=255)

                                                                            aCTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCa           <  2:1790699/93‑1 (MQ=255)

                                                                             cTGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCAt          <  1:99833/93‑1 (MQ=255)

                                                                              tGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATg         <  1:3631025/93‑1 (MQ=255)

                                                                              tGAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATg         >  1:1248609/1‑93 (MQ=255)

                                                                               gAAACCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATgg        <  2:1429059/93‑1 (MQ=255)

                                                                                aaaCCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATgct       <  2:4486281/93‑3 (MQ=255)

                                                                                 aaCCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTa      >  1:1498587/1‑93 (MQ=255)

                                                                                 aaCCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTa      >  1:2711941/1‑93 (MQ=255)

                                                                                  aCCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTaa     <  1:3334195/93‑1 (MQ=255)

                                                                                  aCCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTaa     <  1:116562/93‑1 (MQ=255)

                                                                                  aCCGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCAGTTACAACTATCATGGTaa     <  2:4576037/93‑1 (MQ=255)

                                                                                   ccGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAg    <  2:3937126/93‑1 (MQ=255)

                                                                                    cGATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGc   >  1:1574173/1‑93 (MQ=255)

                                                                                     gATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTCTCATGGTAAGCa  >  1:3061352/1‑93 (MQ=255)

                                                                                     gATCTGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCa  <  1:3981453/93‑1 (MQ=255)

GCGAGAAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCCGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCA  >  NC_000913/1186034‑1186211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`