BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,223,082	T→C	G55G (GGT→GGC)	b1173 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,223,082	0	T	C	100.0%	351.6 / NA	113	G55G (GGT→GGC)	b1173	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (72/41); total (72/41)

Only 100 of 120 total aligned reads displayed.

CAGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGTGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTT  >  NC_000913/1222992‑1223170

cAGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGgcgt                                                                                        <  1:1004544/93‑1 (MQ=255)

 aGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGcgtg                                                                                       >  2:68168/1‑93 (MQ=255)

    cGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGaa                                                                                    >  1:3907978/1‑93 (MQ=255)

     gTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAAt                                                                                   >  2:3147631/1‑93 (MQ=255)

     gTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAAt                                                                                   >  1:4028882/1‑93 (MQ=255)

      tGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATc                                                                                  <  2:2609490/93‑1 (MQ=255)

         aaTATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATcccc                                                                               >  1:444284/1‑93 (MQ=255)

           tataCCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGt                                                                             >  2:914303/1‑93 (MQ=255)

           tataCCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGt                                                                             >  1:282526/1‑93 (MQ=255)

             taCCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTgg                                                                           >  2:4120867/1‑93 (MQ=255)

               ccAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGaa                                                                         >  2:3587771/1‑93 (MQ=255)

               ccAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGaa                                                                         >  2:359066/1‑93 (MQ=255)

                  ggCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAAcgc                                                                      <  2:3702065/93‑1 (MQ=255)

                  ggCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAAcgc                                                                      >  1:3189909/1‑93 (MQ=255)

                   gCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAAcgcg                                                                     >  2:300202/1‑93 (MQ=255)

                    cAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCgg                                                                    <  2:401494/93‑1 (MQ=255)

                    cAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCgg                                                                    <  1:4557889/93‑1 (MQ=255)

                     aGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGt                                                                   >  1:517789/1‑93 (MQ=255)

                     aGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGt                                                                   >  1:1637848/1‑93 (MQ=255)

                     aGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGt                                                                   <  2:3501650/93‑1 (MQ=255)

                       cTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTgg                                                                 <  2:3775006/93‑1 (MQ=255)

                         aTTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTTGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGCGGAACGCGGTGGCt                                                               >  2:2472178/1‑93 (MQ=255)

                         aTTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCt                                                               >  2:1270441/1‑93 (MQ=255)

                         aTTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGCATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCt                                                               >  2:2494435/1‑93 (MQ=255)

                          ttAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTg                                                              <  1:4358923/93‑1 (MQ=255)

                           tAAAGCCTCCTTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTgg                                                             <  1:2990139/93‑1 (MQ=255)

                              aGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGgtgt                                                          <  1:4533259/93‑1 (MQ=255)

                              aGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGgtgt                                                          >  1:3654742/1‑93 (MQ=255)

                              aGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGgtgt                                                          >  2:2199382/1‑93 (MQ=255)

                              aGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGCATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGgtgt                                                          >  2:2521569/1‑93 (MQ=255)

                               gCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGtgtg                                                         >  1:4303673/1‑93 (MQ=255)

                               gCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGtgtg                                                         >  1:1603412/1‑93 (MQ=255)

                                 cTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATTCCCGTGGAACGCGGTGGCTGGTGTGaa                                                       >  1:335513/1‑93 (MQ=255)

                                 cTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGaa                                                       <  2:1827986/93‑1 (MQ=255)

                                 cTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGaa                                                       >  1:2975702/1‑93 (MQ=255)

                                  tCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAAc                                                      >  2:4263614/1‑93 (MQ=255)

                                   cATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGGACt                                                     >  2:2221523/1‑93 (MQ=255)

                                   cATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACt                                                     <  1:659098/93‑1 (MQ=255)

                                   cATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAAGCCCCGTGGAACGCGGTGGCTGGTGTGAACt                                                     <  2:3669355/93‑1 (MQ=255)

                                    aTTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTg                                                    >  2:141565/1‑93 (MQ=255)

                                      tCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGt                                                  >  1:1007769/1‑93 (MQ=255)

                                       cagcagTACGTTTAGCGGACATCTGGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTc                                                 >  2:4519164/1‑93 (MQ=255)

                                       cagcagTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTc                                                 <  1:3340350/93‑1 (MQ=255)

                                       cagcagTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTc                                                 >  2:2921876/1‑93 (MQ=255)

                                         gcagTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGt                                               >  2:3958379/1‑93 (MQ=255)

                                          cagTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGtt                                              <  1:3890838/93‑1 (MQ=255)

                                            gTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCt                                            >  2:73191/1‑93 (MQ=255)

                                            gTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCt                                            >  2:111627/1‑93 (MQ=255)

                                             tACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTg                                           >  1:989421/1‑93 (MQ=255)

                                              aCGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGa                                          <  2:2021366/93‑1 (MQ=255)

                                                gTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGAcc                                        >  2:1287630/1‑93 (MQ=255)

                                                gTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGAcc                                        >  1:2261300/1‑93 (MQ=255)

                                                gTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGAcc                                        >  1:369909/1‑93 (MQ=255)

                                                gTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGAcc                                        >  2:3807185/1‑93 (MQ=255)

                                                gTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGAcc                                        >  2:3275326/1‑93 (MQ=255)

                                                 tttAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCa                                       >  2:2919007/1‑93 (MQ=255)

                                                 tttAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCa                                       <  1:3499943/93‑1 (MQ=255)

                                                   tAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATc                                     <  1:2518362/93‑1 (MQ=255)

                                                    aGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTTACCATCa                                    >  1:1025957/1‑93 (MQ=255)

                                                    aGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCa                                    >  1:3687625/1‑93 (MQ=255)

                                                     gCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCaa                                   >  1:2579311/1‑93 (MQ=255)

                                                      cGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAAGCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAAc                                  <  2:3298040/93‑1 (MQ=255)

                                                       ggACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACg                                 >  1:4537765/1‑93 (MQ=255)

                                                        gACATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGa                                >  2:2431653/1‑93 (MQ=255)

                                                         aCATCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGAt                               >  2:1725113/1‑93 (MQ=255)

                                                           aTCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTa                             >  1:3601850/1‑93 (MQ=255)

                                                           aTCTCGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTa                             <  1:3933014/93‑1 (MQ=255)

                                                            tctcGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTaa                            >  1:4244008/1‑93 (MQ=255)

                                                             ctcGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTaaa                           >  1:2864216/1‑93 (MQ=255)

                                                              tcGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAAc                          >  2:298759/1‑93 (MQ=255)

                                                               cGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACt                         <  1:1001760/93‑1 (MQ=255)

                                                               cGGGGTGGGGTATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACt                         <  1:3985442/93‑1 (MQ=255)

                                                                 gggtggggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTgc                       >  1:25534/1‑93 (MQ=255)

                                                                 gggtggggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTgc                       >  2:3200711/1‑93 (MQ=255)

                                                                 gggtggggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTgc                       >  1:849062/1‑93 (MQ=255)

                                                                  ggtggggtGTAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTAACCATCAACGATTAAACTgcg                      >  1:748449/1‑93 (MQ=17)

                                                                   gtggggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTAGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTgcgc                     >  2:2426338/1‑93 (MQ=255)

                                                                    tggggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCt                    >  1:2555295/1‑93 (MQ=255)

                                                                      gggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTc                  <  2:1844211/93‑1 (MQ=255)

                                                                      gggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTc                  <  2:1928765/93‑1 (MQ=255)

                                                                      gggtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTc                  <  2:3630260/93‑1 (MQ=255)

                                                                        gtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCgg                <  1:3244162/93‑1 (MQ=255)

                                                                        gtATAGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCgg                <  2:2035456/93‑1 (MQ=255)

                                                                          ataGCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGgcg              >  1:4382934/1‑93 (MQ=255)

                                                                             gCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAg           >  1:3324338/1‑93 (MQ=255)

                                                                             gCCATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAg           >  2:3880025/1‑93 (MQ=255)

                                                                              gcATGGTGCCGGCGTGGCATCCCCGTGGAACGCTGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGt          <  1:466908/92‑1 (MQ=21)

                                                                              ccATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGt          >  2:1231802/1‑93 (MQ=255)

                                                                              ccATGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGt          <  2:215175/93‑1 (MQ=255)

                                                                                aTGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGttt        <  1:3010556/93‑1 (MQ=255)

                                                                                aTGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGttt        <  2:535983/93‑1 (MQ=255)

                                                                                 tGGTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGtttt       <  2:1787740/93‑1 (MQ=255)

                                                                                 tGGTGCCGGCGTGGAATCCCCGGGGAACGCGGTGGCTGGTGGGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGgttt       >  2:4569836/1‑93 (MQ=18)

                                                                                  ggTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTc      <  1:1045639/93‑1 (MQ=255)

                                                                                   gTGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCg     <  2:799546/93‑1 (MQ=255)

                                                                                    tGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGt    <  1:2578511/93‑1 (MQ=255)

                                                                                    tGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGt    <  1:1455052/93‑1 (MQ=255)

                                                                                    tGCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGt    >  1:1657210/1‑93 (MQ=255)

                                                                                     gCCGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGtt   <  1:83626/93‑1 (MQ=255)

                                                                                      ccGGCGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGttt  <  2:4608073/93‑1 (MQ=255)

CAGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGTGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGACCATCAACGATTAAACTGCGCTTCGGCGCAGTTTTCGTTT  >  NC_000913/1222992‑1223170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`