BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,233,892	A→G	S17P (TCC→CCC)	nhaB ←	Na+/H+ antiporter, pH independent

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,233,892	0	A	G	100.0%	381.5 / NA	125	S17P (TCC→CCC)	nhaB	Na+/H+ antiporter, pH independent
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (76/49); total (76/49)

Only 100 of 128 total aligned reads displayed.

CAACCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGACTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGTTTTT  >  NC_000913/1233803‑1233980

cAACCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTg                                                                                       <  2:2137834/93‑1 (MQ=255)

 aaCCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTgg                                                                                      >  1:4589423/1‑93 (MQ=255)

 aaCCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTgg                                                                                      >  2:2356625/1‑93 (MQ=255)

 aaCCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTgg                                                                                      >  1:1945568/1‑93 (MQ=255)

 aaCCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGGTTGTACCAGTCGGGGGGCTgg                                                                                      >  1:1742209/1‑93 (MQ=255)

  aCCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGc                                                                                     >  2:1817866/1‑93 (MQ=255)

  aCCAGCCCGCGACGAAAGGGCTGATAAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGc                                                                                     >  1:1337280/1‑93 (MQ=255)

         cgcgACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCaaaaa                                                                              >  1:3078839/1‑93 (MQ=255)

         cgcgACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCaaaaa                                                                              >  2:3347068/1‑93 (MQ=255)

           cgacgaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAAt                                                                            >  2:1193324/1‑93 (MQ=255)

           cgacgaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAAt                                                                            <  2:4033971/93‑1 (MQ=255)

            gacgaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAAtt                                                                           <  1:2341070/93‑1 (MQ=255)

            gacgaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAAtt                                                                           <  1:1497512/93‑1 (MQ=255)

             acgaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAGAAATTg                                                                          >  1:2742772/1‑93 (MQ=255)

              cgaAAGGGCTGATGAGGAAAATTAACGGGTTTACAATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTgc                                                                         <  1:3295617/93‑1 (MQ=255)

               gaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTgcg                                                                        >  2:62378/1‑93 (MQ=255)

               gaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTgcg                                                                        >  2:3318745/1‑93 (MQ=255)

               gaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTgcg                                                                        >  1:575812/1‑93 (MQ=255)

               gaAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTgcg                                                                        >  2:2682151/1‑93 (MQ=255)

                 aaGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGcc                                                                      <  1:506317/93‑1 (MQ=255)

                 aaGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGcc                                                                      >  1:1352079/1‑93 (MQ=255)

                  aGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCa                                                                     >  1:1688344/1‑93 (MQ=255)

                   gggCTGATGAGGAAAATTACCGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCAt                                                                    >  2:4571331/1‑93 (MQ=255)

                   gggCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCAt                                                                    >  1:3383580/1‑93 (MQ=255)

                   gggCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCAt                                                                    >  2:1559752/1‑93 (MQ=255)

                   gggCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGGTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCAt                                                                    >  1:2967483/1‑93 (MQ=255)

                      cTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAgc                                                                 >  1:3198509/1‑93 (MQ=255)

                           gaGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGcgcgcg                                                            >  2:1190704/1‑93 (MQ=255)

                            aGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTAACAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCgg                                                           >  2:101988/1‑93 (MQ=255)

                             ggAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGc                                                          >  1:1781438/1‑93 (MQ=255)

                                aaaTTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGcccc                                                       >  1:228780/1‑93 (MQ=255)

                                 aaTTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCa                                                      >  2:4299946/1‑93 (MQ=255)

                                  aTTAAGGGTTTTACGATAAAGAAAATGATGGGGGCGATTTTGTCCCAGTCGGGGGGCGGGCCAAAAAAATTGCGCCATAGCGCGCGGCCCCAg                                                     <  2:2525970/93‑1 (MQ=255)

                                  aTTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAg                                                     >  2:2340346/1‑93 (MQ=255)

                                  aTTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAg                                                     <  2:2960182/93‑1 (MQ=255)

                                   ttAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAgg                                                    <  2:4341300/93‑1 (MQ=255)

                                     aaCGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGgag                                                  >  2:1378632/1‑93 (MQ=255)

                                      aCGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGgaga                                                 <  1:2297478/93‑1 (MQ=255)

                                        gggTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGAtc                                               <  2:1592687/93‑1 (MQ=255)

                                        gggTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGAtc                                               >  2:2907823/1‑93 (MQ=255)

                                          gTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGAtctc                                             >  2:4100025/1‑93 (MQ=255)

                                           tttACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTcc                                            <  2:660181/93‑1 (MQ=255)

                                           tttACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTcc                                            >  1:2403326/1‑93 (MQ=255)

                                             tACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCat                                          >  2:2662603/1‑93 (MQ=255)

                                                gATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgat                                       >  2:3784981/1‑93 (MQ=255)

                                                gATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgat                                       <  2:2791256/93‑1 (MQ=255)

                                                gATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgat                                       <  2:2047079/93‑1 (MQ=255)

                                                gATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgat                                       >  1:1725903/1‑93 (MQ=255)

                                                gATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgat                                       <  1:4478817/93‑1 (MQ=255)

                                                gATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgat                                       >  1:88820/1‑93 (MQ=255)

                                                 aTTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgatg                                      >  2:3410108/1‑93 (MQ=255)

                                                 aTTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCatgatg                                      >  2:3920086/1‑93 (MQ=255)

                                                  ttAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATgg                                     >  2:3184404/1‑93 (MQ=255)

                                                   tAAGAAAATGATGAGGGCGAGTTTGTGCCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGt                                    <  1:4246212/93‑1 (MQ=255)

                                                   tAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGt                                    >  2:1239102/1‑93 (MQ=255)

                                                   tAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGt                                    <  1:1516893/93‑1 (MQ=255)

                                                   tAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATCGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGt                                    <  1:3386171/93‑1 (MQ=255)

                                                    aaGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGtt                                   <  2:2315837/93‑1 (MQ=255)

                                                    aaGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGtt                                   <  2:3739736/93‑1 (MQ=255)

                                                      gAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTc                                 <  1:3178405/93‑1 (MQ=255)

                                                      gAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTc                                 >  2:3700369/1‑93 (MQ=255)

                                                      gAAAATGAGGAGGGCGAGTTGGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTc                                 <  2:3388979/93‑1 (MQ=255)

                                                       aaaaTGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTcc                                <  1:4271888/93‑1 (MQ=255)

                                                       aaaaTGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTcc                                <  2:2883661/93‑1 (MQ=255)

                                                         aaTGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCcct                              <  1:1574054/93‑1 (MQ=255)

                                                         aaTGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCcct                              <  1:1797150/93‑1 (MQ=255)

                                                         aaTGATGAGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCcct                              <  1:1779518/93‑1 (MQ=255)

                                                           tgatgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttc                            >  1:1057488/1‑92 (MQ=255)

                                                           tgatgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCcctta                            >  1:1585624/1‑93 (MQ=255)

                                                           tgatgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGAGCGCTGCCCCAGGAGATCTCCATGATGGTTTCccttc                            >  1:2033151/1‑92 (MQ=255)

                                                            gatgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttac                           >  1:1792488/1‑93 (MQ=255)

                                                            gatgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttac                           <  1:4452715/93‑1 (MQ=255)

                                                             atgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacc                          >  1:2422483/1‑93 (MQ=255)

                                                             atgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacc                          <  1:2666900/93‑1 (MQ=255)

                                                              tgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacct                         >  1:385401/1‑93 (MQ=255)

                                                              tgaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacct                         >  1:2207988/1‑93 (MQ=255)

                                                              tgaGGGCGAGTGTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacct                         <  2:3937961/93‑1 (MQ=255)

                                                               gaGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacctt                        >  2:2168813/1‑93 (MQ=255)

                                                                aGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacctta                       <  2:2569444/93‑1 (MQ=255)

                                                                aGGGCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCccttacctta                       <  2:1805036/93‑1 (MQ=255)

                                                                   gCGAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACaa                    >  2:4229088/1‑93 (MQ=255)

                                                                     gAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAaat                  >  1:3903197/1‑93 (MQ=255)

                                                                     gAGTTTGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAaat                  <  2:1606798/93‑1 (MQ=255)

                                                                        tttGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAaataat               >  2:4504657/1‑93 (MQ=255)

                                                                         ttGTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATc              <  2:647129/93‑1 (MQ=255)

                                                                           gTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCaa            >  2:3103782/1‑93 (MQ=255)

                                                                           gTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCaa            >  2:3989307/1‑93 (MQ=255)

                                                                           gTACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCaa            <  2:4092641/93‑1 (MQ=255)

                                                                            tACCAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAat           <  1:897826/93‑1 (MQ=255)

                                                                              ccAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAatga         <  1:2541053/93‑1 (MQ=255)

                                                                              acAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAatga         <  1:772699/92‑1 (MQ=255)

                                                                               cAGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAatgat        >  1:2047458/1‑93 (MQ=255)

                                                                               cAGTCGGGGGGCTGGCCCAAAAAATTGCGCAATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAatgct        >  1:3781196/1‑91 (MQ=255)

                                                                                aGTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAatgatg       >  2:1570319/1‑93 (MQ=255)

                                                                                 gTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGt      <  1:2844680/93‑1 (MQ=255)

                                                                                 gTCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGt      >  2:3022629/1‑93 (MQ=255)

                                                                                  tCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGtt     <  2:2208444/93‑1 (MQ=255)

                                                                                  tCGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGtt     <  1:1228314/93‑1 (MQ=255)

                                                                                   cGGGGGGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGttt    <  1:525729/93‑1 (MQ=255)

                                                                                     ggggGCTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGttttt  >  2:1847507/1‑93 (MQ=255)

CAACCAGCCCGCGACGAAAGGGCTGATGAGGAAAATTAACGGGTTTACGATTAAGAAAATGATGAGGGCGAGTTTGTACCAGTCGGGGGACTGGCCCAAAAAATTGCGCCATAGCGCGCGGCCCCAGGAGATCTCCATGATGGTTTCCCTTACCTTACAAATAATCAATGATGTTTTT  >  NC_000913/1233803‑1233980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`