BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,235,760	A→G	Y235Y (TAT→TAC)	ycgB ←	putative sporulation protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,235,760	0	A	G	100.0%	324.2 / NA	106	Y235Y (TAT→TAC)	ycgB	putative sporulation protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (53/53); total (53/53)

Only 100 of 116 total aligned reads displayed.

ACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTC  >  NC_000913/1235671‑1235849

 caATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgc                                                                                       <  1:981388/93‑1 (MQ=255)

  aaTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcg                                                                                      <  2:264043/93‑1 (MQ=255)

  aaTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcg                                                                                      <  1:1938563/93‑1 (MQ=255)

   aTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcgg                                                                                     <  1:4090530/93‑1 (MQ=255)

    tACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcggc                                                                                    >  2:1541637/1‑93 (MQ=255)

    tACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAgcggc                                                                                    >  2:3846629/1‑93 (MQ=255)

       gCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGgcgcg                                                                                 >  1:2702311/1‑93 (MQ=255)

       gCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGgcgcg                                                                                 <  1:1424888/93‑1 (MQ=255)

       gCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGCTTTCTTGTGGTTCGGACGGGTAGCGgcgcg                                                                                 >  1:2761405/1‑93 (MQ=255)

        cAGGATTTCACGCTGCCATGATTCCGGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGgcgcgc                                                                                >  2:551474/1‑93 (MQ=255)

          ggATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCtt                                                                              >  1:15878/1‑93 (MQ=255)

          ggATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCtt                                                                              >  2:1582938/1‑93 (MQ=255)

          ggATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGGTTTCTTGTGGTTCGGACGGGTAGCGGAGCGGtt                                                                              >  2:4182061/1‑93 (MQ=255)

           gATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTc                                                                             <  2:285330/93‑1 (MQ=255)

                 aCGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAAc                                                                       <  1:2944776/93‑1 (MQ=255)

                  cGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAAcc                                                                      <  2:1775464/93‑1 (MQ=255)

                   gCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCg                                                                     >  1:734159/1‑93 (MQ=255)

                    cTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGt                                                                    <  1:2386141/93‑1 (MQ=255)

                     tGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCggt                                                                   >  2:465611/1‑91 (MQ=255)

                     tGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGtt                                                                   <  1:3597405/93‑1 (MQ=255)

                     tGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGtt                                                                   >  1:4395140/1‑93 (MQ=255)

                      gCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGttt                                                                  >  2:1470636/1‑93 (MQ=255)

                      gCCATGATTCCAGCAGTGGAGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAAACGgtt                                                                  >  2:1470635/1‑93 (MQ=255)

                       ccATGATTCCAGCAGTGTCGGATTTTTCTCCACAAAATATCGCAGGTTATATTGAGGTTCCGACGGGTGGAGTCGCGGTTGAGCACCCGgttt                                                                 >  2:1992988/1‑93 (MQ=255)

                       ccATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGtttt                                                                 <  1:1702477/93‑1 (MQ=255)

                       ccATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGtttt                                                                 >  1:332678/1‑93 (MQ=255)

                        cATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtc                                                                >  1:2463172/1‑93 (MQ=255)

                        cATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtc                                                                >  1:1617677/1‑93 (MQ=255)

                        cATGATGCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtc                                                                <  2:3640875/93‑1 (MQ=255)

                         aTGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATTGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtct                                                               <  2:3384469/93‑1 (MQ=255)

                         aTGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTtct                                                               >  1:2302671/1‑93 (MQ=255)

                          tGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCCACCGTTTtctc                                                              >  2:1839445/1‑93 (MQ=255)

                           gATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTctct                                                             >  1:356069/1‑93 (MQ=255)

                            aTTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCtt                                                            <  2:3729101/93‑1 (MQ=255)

                             ttCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTc                                                           >  1:3646210/1‑93 (MQ=255)

                             ttCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTc                                                           >  1:2028141/1‑93 (MQ=255)

                              tCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTcc                                                          <  2:781137/93‑1 (MQ=255)

                               ccAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGTTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCt                                                         <  1:4492325/93‑1 (MQ=255)

                               ccAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCt                                                         <  1:4305397/93‑1 (MQ=255)

                                cagcagTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTc                                                        >  1:3662193/1‑93 (MQ=255)

                                cagcagTGGCGCATTTTTCTCCAAAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTc                                                        <  1:286174/93‑1 (MQ=255)

                                  gcagTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTcgc                                                      >  1:1305436/1‑93 (MQ=255)

                                     gTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACTGTTTTCTCTTCCTCGCGCt                                                   >  2:1561220/1‑93 (MQ=255)

                                     gTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCt                                                   <  1:1681254/93‑1 (MQ=255)

                                     gTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCt                                                   >  2:3170237/1‑93 (MQ=255)

                                     gTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCt                                                   >  1:4136364/1‑93 (MQ=255)

                                      tGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCtt                                                  <  2:4186214/93‑1 (MQ=255)

                                      tGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCtt                                                  <  1:1781131/93‑1 (MQ=255)

                                       ggCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTc                                                 >  1:230392/1‑93 (MQ=255)

                                          gcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGc                                              <  1:3888126/93‑1 (MQ=255)

                                          gcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGc                                              >  1:4660742/1‑93 (MQ=255)

                                          gcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGc                                              >  1:4548121/1‑93 (MQ=255)

                                          gcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGc                                              >  1:3179190/1‑93 (MQ=255)

                                           cATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCa                                             <  2:415103/93‑1 (MQ=255)

                                           cATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCa                                             >  1:3831459/1‑93 (MQ=255)

                                            aTTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAg                                            <  1:1219799/93‑1 (MQ=255)

                                            aTTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAg                                            >  1:1892234/1‑93 (MQ=255)

                                             tttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAgg                                           <  1:159293/93‑1 (MQ=255)

                                              ttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAggg                                          <  1:2416549/93‑1 (MQ=255)

                                              ttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAggg                                          >  1:763629/1‑93 (MQ=255)

                                              ttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAggg                                          <  1:2739553/93‑1 (MQ=255)

                                              ttttCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAggg                                          >  1:1045470/1‑93 (MQ=255)

                                                 tctcCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTAc                                       <  2:1051503/93‑1 (MQ=255)

                                                 tctcCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTAc                                       >  2:2354373/1‑93 (MQ=255)

                                                  ctcCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACg                                      >  2:3674694/1‑93 (MQ=255)

                                                     cATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGGAGGccg                                   >  2:1846953/1‑92 (MQ=255)

                                                       tAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCaga                                 <  1:136039/93‑1 (MQ=255)

                                                       tAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCaga                                 <  2:1857628/93‑1 (MQ=255)

                                                        aaaaTAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCagag                                >  2:2757094/1‑93 (MQ=255)

                                                         aaaTAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGc                               <  2:1068645/93‑1 (MQ=255)

                                                           aTAGAGCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCat                             <  2:1891447/93‑1 (MQ=255)

                                                              gagCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATAtt                          <  1:2858952/93‑1 (MQ=255)

                                                              gagCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATAtt                          <  2:3874225/93‑1 (MQ=255)

                                                                gCAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGGACGCCAGAGCATATTGa                        >  1:650858/1‑93 (MQ=255)

                                                                 cAGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAc                       >  2:3618033/1‑93 (MQ=255)

                                                                  aGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAcc                      <  2:2214332/93‑1 (MQ=255)

                                                                  aGGTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAcc                      <  1:771606/93‑1 (MQ=255)

                                                                   ggTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCt                     <  2:2256665/93‑1 (MQ=255)

                                                                   ggTTTTCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCt                     <  1:151310/93‑1 (MQ=255)

                                                                     ttttCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGa                   >  1:2203079/1‑93 (MQ=255)

                                                                      tttCTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGAGCTGAc                  <  2:2971450/93‑1 (MQ=255)

                                                                         cTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACttt               <  1:359891/93‑1 (MQ=255)

                                                                         cTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACttt               <  1:21074/93‑1 (MQ=255)

                                                                         cTTGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGGACGCCAGAGCATATTGACCTGACttt               >  2:1169033/1‑93 (MQ=255)

                                                                         cTTGTGGTTCGGACGGGTAGCGCCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTAACCTGACttt               <  2:4028232/93‑1 (MQ=255)

                                                                          ttGTGGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTg              >  2:922444/1‑93 (MQ=255)

                                                                            gtgGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCa            <  2:2649206/93‑1 (MQ=255)

                                                                            gtgGTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCa            <  2:1877621/93‑1 (MQ=255)

                                                                              ggTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGa          >  1:4115809/1‑93 (MQ=255)

                                                                               gTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGAt         <  2:3648616/93‑1 (MQ=255)

                                                                               gTTCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGAt         >  2:3122787/1‑93 (MQ=255)

                                                                                ttCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGTAGATa        <  1:1328109/93‑1 (MQ=255)

                                                                                ttCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATa        <  2:4494238/93‑1 (MQ=255)

                                                                                 tCGGACGGGTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATAc       <  1:2401487/93‑1 (MQ=255)

                                                                                  cggacgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATAct      >  2:4499790/1‑93 (MQ=255)

                                                                                   ggacgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATActc     <  1:551474/93‑1 (MQ=255)

                                                                                    gacgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATActct    >  2:2924442/1‑93 (MQ=255)

                                                                                     acgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCtt   <  2:3121387/93‑1 (MQ=255)

                                                                                      cgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTc  <  2:3558290/93‑1 (MQ=255)

                                                                                      cgggTAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTc  <  1:1605158/93‑1 (MQ=255)

ACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTC  >  NC_000913/1235671‑1235849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`