BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,237,963	C→T	S390S (TCC→TCT)	dadA →	D‑amino acid dehydrogenase subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,237,963	0	C	T	100.0%	479.1 / NA	133	S390S (TCC→TCT)	dadA	D‑amino acid dehydrogenase subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (59/74); total (59/74)

Only 100 of 139 total aligned reads displayed.

CGGCACGCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTAC  >  NC_000913/1237873‑1238052

cGGCACGCCGGTTGTCGGGCGGACACGCTTTAAAAATCTGTGGCTGAATAACGGTCACGGCACGCTCGGGTGGCAGGTGGATTGCGGTTCTgg                                                                                         >  2:189691/1‑93 (MQ=255)

 ggCACGCCGTTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGt                                                                                        <  2:1077282/93‑1 (MQ=255)

   cACGCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCa                                                                                      <  2:2142845/93‑1 (MQ=255)

    aCGCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAg                                                                                     >  1:2246691/1‑93 (MQ=255)

    aCGCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAg                                                                                     <  2:1597803/93‑1 (MQ=255)

      gCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTCGCCGTTCTGGTCAgtt                                                                                   >  2:2303225/1‑93 (MQ=255)

       ccGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAgttg                                                                                  <  1:1188745/93‑1 (MQ=255)

         ggTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAgttgtt                                                                                <  2:1562274/93‑1 (MQ=255)

           ttGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAAGACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTaa                                                                              <  2:490815/93‑1 (MQ=255)

            tGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAg                                                                             >  2:2524999/1‑93 (MQ=255)

            tGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAg                                                                             <  2:1408397/93‑1 (MQ=255)

              tCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCg                                                                           <  1:3324463/93‑1 (MQ=255)

               cGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGa                                                                          <  1:4680758/93‑1 (MQ=255)

                gggCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGAt                                                                         <  2:2582534/93‑1 (MQ=255)

                 ggCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATc                                                                        >  1:3757306/1‑93 (MQ=255)

                 ggCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATc                                                                        >  1:2319299/1‑93 (MQ=255)

                    gTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGc                                                                     <  1:507450/93‑1 (MQ=255)

                      acacGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGctc                                                                   <  2:3282771/93‑1 (MQ=255)

                      acacGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGctc                                                                   >  2:1023325/1‑93 (MQ=255)

                       cacGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGctct                                                                  >  2:3491901/1‑93 (MQ=255)

                       cacGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTCCGGGTCTGGTCCGGTGGTCAGCGATCTGctcc                                                                  >  2:431749/1‑92 (MQ=255)

                        acGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGctctc                                                                 <  1:4191413/93‑1 (MQ=255)

                        acGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGctctc                                                                 <  2:1135793/93‑1 (MQ=255)

                         cGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGctctct                                                                <  2:1953045/93‑1 (MQ=255)

                         cGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGctctct                                                                <  2:3592809/93‑1 (MQ=255)

                          gCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTg                                                               >  1:2893589/1‑93 (MQ=255)

                          gCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTg                                                               >  1:3291690/1‑93 (MQ=255)

                           cTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTgg                                                              <  2:77923/93‑1 (MQ=255)

                           cTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTgg                                                              <  1:2382367/93‑1 (MQ=255)

                            tttAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGt                                                             >  1:3744184/1‑93 (MQ=255)

                            tttAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGt                                                             >  1:462123/1‑93 (MQ=255)

                            tttAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGt                                                             >  1:3147708/1‑93 (MQ=255)

                             ttAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTc                                                            >  1:4094774/1‑93 (MQ=255)

                                   aTCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCTGTTCTGGTCCGTTGTTATGCGATCTTCTCTCTGGTCGCACGc                                                      >  2:3481264/1‑93 (MQ=255)

                                   aTCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGc                                                      >  1:394386/1‑93 (MQ=255)

                                   aTCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGc                                                      <  2:4203487/93‑1 (MQ=255)

                                   aTCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGc                                                      <  2:1725644/93‑1 (MQ=255)

                                   aTCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGc                                                      >  2:191727/1‑93 (MQ=255)

                                   aTCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGc                                                      >  1:3528508/1‑93 (MQ=255)

                                   aTCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGc                                                      >  2:2287605/1‑93 (MQ=255)

                                    tCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGcc                                                     <  1:2940760/93‑1 (MQ=255)

                                     cTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTCGTCGCACGCCa                                                    >  1:3869043/1‑93 (MQ=255)

                                      tgtgGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAg                                                   >  2:198314/1‑93 (MQ=255)

                                      tgtgGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAg                                                   <  2:1288607/93‑1 (MQ=255)

                                         ggCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGa                                                >  2:4457094/1‑93 (MQ=255)

                                         ggCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCGCTCTGGTCGCACgcgagcga                                                >  2:1359371/1‑93 (MQ=255)

                                            tGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATcc                                             >  2:3399952/1‑93 (MQ=255)

                                            tGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATcc                                             >  1:601266/1‑93 (MQ=255)

                                            tGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATcc                                             >  2:1396995/1‑93 (MQ=255)

                                                tACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCata                                         <  2:2130220/93‑1 (MQ=255)

                                                tACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCata                                         >  1:1789127/1‑93 (MQ=255)

                                                 tccGGGCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCatat                                        <  1:1497491/92‑1 (MQ=255)

                                                 aCCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCTATCTGCTCTCTGGTCGCACGCCAGCGATCCCatat                                        <  1:2591873/93‑1 (MQ=255)

                                                  ccGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATg                                       <  2:995976/93‑1 (MQ=255)

                                                   cGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGa                                      <  1:1107585/93‑1 (MQ=255)

                                                   cGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGa                                      >  2:1548494/1‑93 (MQ=255)

                                                   cGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGa                                      <  2:2076296/93‑1 (MQ=255)

                                                    ggTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAg                                     >  2:2013777/1‑93 (MQ=255)

                                                     gTCACGGCACGCTCGGCTGGACGATGGCTTGTGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAgg                                    <  2:956337/93‑1 (MQ=255)

                                                     gTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAgg                                    >  1:3286767/1‑93 (MQ=255)

                                                      tCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCTTATGAGGa                                   <  2:4565475/93‑1 (MQ=255)

                                                      tCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGa                                   >  2:361974/1‑93 (MQ=255)

                                                        aCGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATc                                 >  2:1663624/1‑93 (MQ=255)

                                                        aCGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATc                                 >  1:282851/1‑93 (MQ=255)

                                                        aCGGCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATc                                 >  1:3249705/1‑93 (MQ=255)

                                                          ggCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTa                               <  2:3314530/93‑1 (MQ=255)

                                                          ggCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGAGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTa                               >  2:434350/1‑93 (MQ=255)

                                                           gCACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTaa                              <  2:2711787/93‑1 (MQ=255)

                                                            cACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAg                             <  2:1202301/93‑1 (MQ=255)

                                                            cACGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAg                             >  1:632818/1‑93 (MQ=255)

                                                             aCGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGc                            <  1:3192330/93‑1 (MQ=255)

                                                             aCGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGc                            >  2:180542/1‑93 (MQ=255)

                                                              cGCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCg                           >  1:3619185/1‑93 (MQ=255)

                                                               gCTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGt                          <  2:1317183/93‑1 (MQ=255)

                                                                cTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTa                         <  1:1531011/93‑1 (MQ=255)

                                                                cTCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTa                         <  2:2775096/93‑1 (MQ=255)

                                                                 tCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAg                        >  2:4412190/1‑93 (MQ=255)

                                                                 tCGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAg                        <  1:1144183/93‑1 (MQ=255)

                                                                  cGGCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAgc                       <  1:695667/93‑1 (MQ=255)

                                                                   ggCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAgcg                      <  1:4417691/93‑1 (MQ=255)

                                                                    gCTGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAgcgc                     <  2:2496660/93‑1 (MQ=255)

                                                                      tGGACGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAgcgcgc                   >  1:1674794/1‑93 (MQ=255)

                                                                         aCGATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTAc                <  1:3979486/93‑1 (MQ=255)

                                                                           gATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAg              >  1:207059/1‑93 (MQ=255)

                                                                           gATGGCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAg              <  2:3942569/93‑1 (MQ=255)

                                                                              ggCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGAGTAGCGCGCTACAGCCg           >  2:3579704/1‑93 (MQ=255)

                                                                               gCTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGt          <  1:4510742/93‑1 (MQ=255)

                                                                                cTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTg         <  1:2264229/93‑1 (MQ=255)

                                                                                cTTGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTg         <  2:1822790/93‑1 (MQ=255)

                                                                                 ttGCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTgg        >  1:831325/1‑93 (MQ=255)

                                                                                   gCGTTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGAt      <  2:797171/93‑1 (MQ=255)

                                                                                   gCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGAt      <  1:2559493/93‑1 (MQ=255)

                                                                                   gCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGAt      <  1:4600108/93‑1 (MQ=255)

                                                                                   gCGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGAt      >  1:4579812/1‑93 (MQ=255)

                                                                                    cGGTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGAtt     <  1:614721/93‑1 (MQ=255)

                                                                                     ggTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGAttt    <  1:690078/93‑1 (MQ=255)

                                                                                      gTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTa   <  1:1363342/93‑1 (MQ=255)

                                                                                      gTTCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTa   <  1:4130429/93‑1 (MQ=255)

                                                                                       ttCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTAc  >  1:492740/1‑93 (MQ=255)

                                                                                       ttCTGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTAc  >  2:2309112/1‑93 (MQ=255)

CGGCACGCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTAC  >  NC_000913/1237873‑1238052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`