BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,243,418	T→C	V111V (GTA→GTG)	ycgR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,243,418	0	T	C	100.0%	304.6 / NA	97	V111V (GTA→GTG)	ycgR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/54); total (43/54)

Only 100 of 105 total aligned reads displayed.

GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507

gAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCAc                                                                                         <  1:2948212/93‑1 (MQ=255)

  aacgtaacgtACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACaa                                                                                       >  2:3622385/1‑93 (MQ=255)

  aacgtaacgtACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACaa                                                                                       >  2:1339032/1‑93 (MQ=255)

  aacgtaacgtACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACaa                                                                                       >  1:1613732/1‑93 (MQ=255)

   acgtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACaaa                                                                                      <  2:1763124/93‑1 (MQ=255)

     gtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAAGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGGTGCACCAAcc                                                                                    >  2:417734/1‑93 (MQ=255)

      taacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   >  1:1050622/1‑93 (MQ=255)

      taacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   <  2:3426620/93‑1 (MQ=255)

      taacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   <  1:1012858/93‑1 (MQ=255)

      taacgcaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   <  1:2351554/93‑1 (MQ=255)

       aacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCAt                                                                                  <  2:905172/93‑1 (MQ=255)

       aacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGGGGGGCGGAGATGCGGAAATATCGGGGTCGTTGCACAAACCAt                                                                                  >  2:4486674/1‑93 (MQ=255)

        acgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATa                                                                                 >  2:2274574/1‑93 (MQ=255)

        acgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATa                                                                                 >  2:3555461/1‑93 (MQ=255)

         cgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATaa                                                                                <  1:3033850/93‑1 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  1:1140082/1‑93 (MQ=255)

            aCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGt                                                                             <  2:4009676/93‑1 (MQ=255)

            aCTGTTATCCGCCAGTGTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGt                                                                             <  2:3233313/93‑1 (MQ=255)

             cTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTg                                                                            <  1:3020677/93‑1 (MQ=255)

             cTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTg                                                                            >  1:2501002/1‑93 (MQ=255)

             cTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTg                                                                            <  1:1410880/93‑1 (MQ=255)

              tGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTgg                                                                           >  1:1787965/1‑93 (MQ=255)

              tGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACAATAAGGTgg                                                                           >  1:1140636/1‑93 (MQ=255)

                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGGGTGGGGCGGAGGTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTgggt                                                                         >  2:1912465/1‑92 (MQ=255)

                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGa                                                                         >  1:155606/1‑93 (MQ=255)

                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGa                                                                         <  1:4048663/93‑1 (MQ=255)

                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGa                                                                         <  1:2655323/93‑1 (MQ=255)

                   tCCGCGATTTTGGTGTGGCAAAAATAAGGCGGATGAAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCCCAACCCATAAGGTGGGAGGc                                                                      <  2:3303885/93‑1 (MQ=255)

                   tCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGc                                                                      <  2:2023544/93‑1 (MQ=255)

                     cGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcgt                                                                    >  2:2079390/1‑92 (MQ=255)

                      gCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggt                                                                   <  1:291693/93‑1 (MQ=255)

                      gCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggt                                                                   >  2:2966565/1‑93 (MQ=255)

                       ccAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggta                                                                  >  2:236183/1‑93 (MQ=255)

                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtag                                                                 >  1:306764/1‑92 (MQ=255)

                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtac                                                                 >  2:1940734/1‑93 (MQ=255)

                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtac                                                                 <  2:4209112/93‑1 (MQ=255)

                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               >  2:2225806/1‑93 (MQ=255)

                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               <  1:557628/93‑1 (MQ=255)

                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               >  1:2756687/1‑93 (MQ=255)

                           tttGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCTTAAGGTGGGAGGcggtacggt                                                              >  2:74960/1‑93 (MQ=255)

                           cttGGTCTGGCAAAAATAAGGCGGGTGGCGGCGGACGGAGATCCGGGAAGATCGGGGTCGCTGCACAAACCATAAGGCGGGAGGcggtactgt                                                              >  2:2385044/2‑93 (MQ=255)

                             tGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaa                                                            <  1:1862470/93‑1 (MQ=255)

                              ggTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaat                                                           <  1:4127944/93‑1 (MQ=255)

                              ggTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGATGGGAGGCGGTACGGtaat                                                           <  2:751085/93‑1 (MQ=255)

                               gTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaata                                                          <  2:3438458/93‑1 (MQ=255)

                               gTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaata                                                          <  1:2990741/93‑1 (MQ=255)

                                tCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGCGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaataa                                                         >  2:185353/1‑93 (MQ=255)

                                tCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaataa                                                         <  2:602641/93‑1 (MQ=255)

                                 cTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCTCAAACCAT‑AGGTGGGAGGCGGTACGGTAATAAAt                                                       <  2:3205879/93‑1 (MQ=255)

                                 cTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATaaa                                                        <  1:1798862/93‑1 (MQ=255)

                                  tGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAAt                                                       >  2:2328148/1‑93 (MQ=255)

                                    gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGc                                                     >  1:1836294/1‑93 (MQ=255)

                                    gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGc                                                     <  1:353379/93‑1 (MQ=255)

                                    gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGc                                                     <  2:1878779/93‑1 (MQ=255)

                                         aaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGaa                                                <  2:4332718/93‑1 (MQ=255)

                                         aaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGaa                                                >  1:3233289/1‑93 (MQ=255)

                                           tAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGc                                              <  2:2535535/93‑1 (MQ=255)

                                           tAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGc                                              <  2:4616817/93‑1 (MQ=255)

                                            aaGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCt                                             <  2:1367121/93‑1 (MQ=255)

                                             aGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTg                                            >  2:956187/1‑93 (MQ=255)

                                              ggCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGc                                           >  2:1911429/1‑93 (MQ=255)

                                                 ggATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAg                                        <  2:334389/93‑1 (MQ=255)

                                                 ggATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAg                                        <  2:4084264/93‑1 (MQ=255)

                                                 ggATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAg                                        >  2:2577253/1‑93 (MQ=255)

                                                 ggATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAg                                        >  1:531209/1‑93 (MQ=255)

                                                  gctGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTGGCACAAACCATAAGGTGGGAGGCGGTACGGGAATAAATGCCGGCAGCTGCAAga                                       >  2:2054199/3‑92 (MQ=255)

                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  1:4092577/1‑93 (MQ=255)

                                                   aTGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTa                                      <  1:2302505/93‑1 (MQ=255)

                                                   aTGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTa                                      >  2:3812505/1‑93 (MQ=255)

                                                    tGGAGTGGCGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTAt                                     <  2:1163918/93‑1 (MQ=255)

                                                     ggAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTAtt                                    >  2:4474147/1‑93 (MQ=255)

                                                        gTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCAc                                 <  1:1341781/93‑1 (MQ=255)

                                                           gggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActct                              <  2:4026396/93‑1 (MQ=255)

                                                           gggCGGAGATGCGGAAATATCGGCGTCGTGGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActct                              <  1:1650447/93‑1 (MQ=255)

                                                            ggCGGAGATGCGGAAATATCGGCGTCGTTGCACAACCCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctg                             <  2:2581607/93‑1 (MQ=255)

                                                            ggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctg                             <  1:825613/93‑1 (MQ=255)

                                                             gCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgc                            <  2:4523425/93‑1 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  1:1198441/1‑93 (MQ=255)

                                                                 agaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa                        <  2:273232/93‑1 (MQ=255)

                                                                 agaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa                        >  1:850666/1‑93 (MQ=255)

                                                                  gaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAg                       >  1:4423936/1‑93 (MQ=255)

                                                                    tGCGGAAATATCGGCGTCGTTGCACAACCCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgtt                     <  1:184490/93‑1 (MQ=255)

                                                                      gggAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgt                   <  1:1056135/92‑1 (MQ=255)

                                                                      cGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgt                   <  1:4442164/93‑1 (MQ=255)

                                                                       ggAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgtt                  >  2:3664727/1‑93 (MQ=255)

                                                                         aaaTATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCa                <  1:4163221/93‑1 (MQ=255)

                                                                           atatCGGCGTCGTTGCACAAACCATAAGATGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAAc              <  2:3891612/93‑1 (MQ=255)

                                                                             atCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg            >  2:4665584/1‑93 (MQ=255)

                                                                             atCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg            <  1:4054743/93‑1 (MQ=255)

                                                                                ggCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaa         >  2:3558889/1‑93 (MQ=255)

                                                                                 gCGTCGTTGCACAAGCCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaaa        <  2:1395284/93‑1 (MQ=255)

                                                                                 gCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaaa        <  1:959983/93‑1 (MQ=255)

                                                                                  cgtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCCCTCTGCTGTAGTTGTTCAACAGTAAAc       <  2:1368029/93‑1 (MQ=255)

                                                                                   gtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      >  1:3417328/1‑93 (MQ=255)

                                                                                   gtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      >  1:1693141/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  1:3411214/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  1:1103816/1‑93 (MQ=255)

                                                                                      gtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGa   <  1:2966482/93‑1 (MQ=255)

                                                                                      gtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGa   >  2:1924029/1‑93 (MQ=255)

                                                                                       ttGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAc  <  2:3290653/93‑1 (MQ=255)

GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`