Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,247,747 T→C T198T (ACA→ACG)  ycgC ← putative PTS system enzyme I/IIA/HPr

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,247,7470TC100.0% 422.0 / NA 133T198T (ACA→ACG) ycgCputative PTS system enzyme I/IIA/HPr
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (72/61);  total (72/61)

Only 100 of 136 total aligned reads displayed.

GCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATG  >  NC_000913/1247658‑1247833
                                                                                         |                                                                                      
gCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGcgtg                                                                                     >  1:4603148/1‑93 (MQ=255)
 ccTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGa                                                                                    >  1:4489196/1‑93 (MQ=255)
 ccTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGa                                                                                    <  1:3071385/93‑1 (MQ=255)
   tctTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACg                                                                                  >  1:1478969/1‑93 (MQ=255)
      tCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCAt                                                                               >  1:1571633/1‑93 (MQ=255)
      tCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCAt                                                                               >  2:3116283/1‑93 (MQ=255)
      tCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCAt                                                                               <  1:3700055/93‑1 (MQ=255)
        aGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCAttt                                                                             >  1:4028061/1‑93 (MQ=255)
        aGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCAttt                                                                             <  2:2571778/93‑1 (MQ=255)
          cTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGc                                                                           >  2:2184598/1‑93 (MQ=255)
          cTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGc                                                                           >  2:2966541/1‑93 (MQ=255)
            tCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCg                                                                         >  1:399659/1‑93 (MQ=255)
               ggCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGttt                                                                      <  1:3117926/93‑1 (MQ=255)
                gCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGtttt                                                                     <  2:1901271/93‑1 (MQ=255)
                gCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGtttt                                                                     >  2:3853425/1‑93 (MQ=255)
                gCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGtttt                                                                     <  1:1931241/93‑1 (MQ=255)
                  ccTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGtttttt                                                                   <  2:828385/93‑1 (MQ=255)
                   cTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGttttttt                                                                  <  1:751180/93‑1 (MQ=255)
                   cTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGttttttt                                                                  <  1:3071032/93‑1 (MQ=255)
                     ttCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTcc                                                                >  2:1552366/1‑93 (MQ=255)
                      tCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCa                                                               >  2:4278685/1‑93 (MQ=255)
                      tCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCa                                                               >  2:1011781/1‑93 (MQ=255)
                       cGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCaa                                                              >  2:2303913/1‑92 (MQ=255)
                       cGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAg                                                              <  1:3702723/93‑1 (MQ=255)
                          aaTCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCaa                                                           <  1:2272711/93‑1 (MQ=255)
                          aaTCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCaa                                                           >  2:4212913/1‑93 (MQ=255)
                          aaTCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCaa                                                           >  2:43283/1‑93 (MQ=255)
                           aTCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAAc                                                          <  1:845434/93‑1 (MQ=255)
                           aTCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAAc                                                          <  1:260853/93‑1 (MQ=255)
                           aTCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGAAAc                                                          >  2:644787/1‑93 (MQ=255)
                            tCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACa                                                         >  1:2780315/1‑93 (MQ=255)
                             cAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACat                                                        <  2:3161566/93‑1 (MQ=255)
                             cAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACat                                                        <  1:1617939/93‑1 (MQ=255)
                              aGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACata                                                       <  1:2092950/93‑1 (MQ=255)
                              aGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACata                                                       >  1:4464716/1‑93 (MQ=255)
                               ggCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACatat                                                      <  2:1377833/93‑1 (MQ=255)
                               ggCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACatat                                                      <  2:2795834/93‑1 (MQ=255)
                                gcgcAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATc                                                     >  1:4328844/1‑93 (MQ=255)
                                 cgcAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCg                                                    <  1:4587312/93‑1 (MQ=255)
                                    aGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCa                                                 >  1:1012577/1‑93 (MQ=255)
                                    aGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCa                                                 >  2:63779/1‑93 (MQ=255)
                                     gCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCAt                                                >  1:1743059/1‑93 (MQ=255)
                                     gCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCAt                                                <  2:3335881/93‑1 (MQ=255)
                                     gCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCAt                                                <  2:2844471/93‑1 (MQ=255)
                                     gCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCAt                                                >  1:3247437/1‑93 (MQ=255)
                                      cGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCAtt                                               <  1:1333732/93‑1 (MQ=255)
                                       gTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTa                                              >  1:4044818/1‑93 (MQ=255)
                                       gTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGGTAATACTCTCTGGCGTGACGCATTTGCCGCTTTTTTCCAGCAACATATCGGCATTa                                              >  1:469615/1‑93 (MQ=255)
                                        tATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTaa                                             >  1:2097760/1‑93 (MQ=255)
                                        tATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTaa                                             >  1:3517657/1‑93 (MQ=255)
                                         aTCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTaaa                                            <  2:203168/93‑1 (MQ=255)
                                         aTCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTaaa                                            >  1:1800148/1‑93 (MQ=255)
                                         aTCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTaaa                                            >  1:3572507/1‑93 (MQ=255)
                                          tCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAAt                                           >  1:1456136/1‑93 (MQ=255)
                                           cGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATg                                          >  2:4072644/1‑93 (MQ=255)
                                            gTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGt                                         <  1:4444073/93‑1 (MQ=255)
                                             ttATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTc                                        >  1:106388/1‑93 (MQ=255)
                                              tataGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCg                                       >  2:1296273/1‑93 (MQ=255)
                                               ataGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGa                                      <  2:426099/93‑1 (MQ=255)
                                                taGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTCTTTCCAGCAACATATCGGCATTAAATGTCGAt                                     >  1:4196679/1‑93 (MQ=255)
                                                 aGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATa                                    >  2:3192519/1‑93 (MQ=255)
                                                 aGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATa                                    >  1:261280/1‑93 (MQ=255)
                                                  gCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATaa                                   >  2:1957738/1‑93 (MQ=255)
                                                   cGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAg                                  <  1:3727646/93‑1 (MQ=255)
                                                    gAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAgg                                 >  2:3070998/1‑93 (MQ=255)
                                                    gAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAgg                                 >  1:4092027/1‑93 (MQ=255)
                                                    gAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAgg                                 <  1:4520630/93‑1 (MQ=255)
                                                      aCTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGta                               <  2:840045/93‑1 (MQ=255)
                                                       cTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGtat                              >  2:4096707/1‑93 (MQ=255)
                                                       cTTGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGtat                              <  1:21888/93‑1 (MQ=255)
                                                        ttGTAGTAACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGtata                             >  2:3386212/1‑93 (MQ=255)
                                                          gtagtaACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATaaa                           <  1:2494936/93‑1 (MQ=255)
                                                            agtaACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAAcc                         >  2:4420391/1‑93 (MQ=255)
                                                             gtaACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCa                        >  1:1008869/1‑93 (MQ=255)
                                                              taACGCAATCTGGTTAATCCTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAg                       <  2:4423979/93‑1 (MQ=255)
                                                              taACGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAg                       >  2:3240137/1‑93 (MQ=255)
                                                               aaCGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGc                      <  1:3234591/93‑1 (MQ=255)
                                                               aaCGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGc                      >  1:4357415/1‑93 (MQ=255)
                                                                aCGCAATCTGGTTAATACTCTCTGGCGTGACGGATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGcc                     <  1:1845442/93‑1 (MQ=255)
                                                                aCGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGGATAAACCAGcc                     >  2:1135172/1‑93 (MQ=255)
                                                                 cGCAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCg                    <  2:3514832/93‑1 (MQ=255)
                                                                   cAATCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCggg                  >  1:418643/1‑93 (MQ=255)
                                                                    aaTCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGa                 >  1:2823983/1‑93 (MQ=255)
                                                                    aaTCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGa                 <  2:2098568/93‑1 (MQ=255)
                                                                     aTCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCTAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAg                <  1:4289350/93‑1 (MQ=255)
                                                                     aTCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAg                >  2:4304117/1‑93 (MQ=255)
                                                                      tCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAgg               >  1:4154010/1‑93 (MQ=255)
                                                                      tCTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAgg               >  1:3892828/1‑93 (MQ=255)
                                                                       cTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGTAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGc              >  2:2436070/1‑93 (MQ=255)
                                                                       cTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGc              <  1:1701963/93‑1 (MQ=255)
                                                                       cTGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGc              <  1:2661083/93‑1 (MQ=255)
                                                                        tGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGcc             >  1:3223890/1‑93 (MQ=255)
                                                                        tGGTTAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGCATAAACCAGCCGGGAGGcc             >  2:2430809/1‑93 (MQ=255)
                                                                           ttAATACTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGa          <  2:2735934/93‑1 (MQ=255)
                                                                                aCTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTAc     <  1:1590554/93‑1 (MQ=255)
                                                                                aCTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTAc     <  1:2396156/93‑1 (MQ=255)
                                                                                aCTCTCTGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTAc     >  2:509846/1‑93 (MQ=255)
                                                                                 ctctctGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACa    >  2:4191078/1‑93 (MQ=255)
                                                                                 ctctctGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACa    >  1:3495466/1‑93 (MQ=255)
                                                                                  tctctGGCGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTACATGTCGATAAGGTATAAACCAGCCGCGAGGCCGGACGTACAt   >  2:3219516/1‑93 (MQ=255)
                                                                                         |                                                                                      
GCCTCTTCAGCTTCTGGCCCTTTCGCAATCAGGCGCAGCGTATCGTTATAGCGAACTTGTAGTAACGCAATCTGGTTAATACTCTCTGGTGTGACGCATTTGCCGTTTTTTTCCAGCAACATATCGGCATTAAATGTCGATAAGGTATAAACCAGCCGGGAGGCCGGACGTACATG  >  NC_000913/1247658‑1247833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑