BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,261,945	A→G	R52R (CGT→CGC)	ychB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,261,945	0	A	G	100.0%	372.7 / NA	120	R52R (CGT→CGC)	ychB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (63/57); total (63/57)

Only 100 of 124 total aligned reads displayed.

CCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATC  >  NC_000913/1261856‑1262034

ccGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGa                                                                                        >  1:828318/1‑93 (MQ=255)

 cGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGaa                                                                                       <  1:569694/93‑1 (MQ=255)

  gCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAat                                                                                      >  1:256154/1‑93 (MQ=255)

    tGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAatat                                                                                    >  1:2537669/1‑93 (MQ=255)

     gTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATc                                                                                   >  2:2730391/1‑93 (MQ=255)

     gTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATc                                                                                   >  1:924423/1‑93 (MQ=255)

      tCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATcc                                                                                  >  1:1318479/1‑93 (MQ=255)

      tCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATcc                                                                                  >  2:3363451/1‑93 (MQ=255)

       cTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATccc                                                                                 <  1:1186985/93‑1 (MQ=255)

         gCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCa                                                                               <  2:4179684/93‑1 (MQ=255)

         gCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCa                                                                               <  2:4440683/93‑1 (MQ=255)

            gCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCg                                                                            >  2:1400797/1‑93 (MQ=255)

            gCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCg                                                                            >  2:2235775/1‑93 (MQ=255)

            gCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCg                                                                            >  1:1909803/1‑93 (MQ=255)

            gCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCg                                                                            >  1:2119345/1‑93 (MQ=255)

             cAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGt                                                                           >  1:2366975/1‑93 (MQ=255)

              aGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTc                                                                          <  1:2252383/93‑1 (MQ=255)

               gTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCa                                                                         >  1:122253/1‑93 (MQ=255)

                     atcaAGAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGc                                                                   <  1:1634830/93‑1 (MQ=255)

                     atcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGc                                                                   <  2:760645/93‑1 (MQ=255)

                     atcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGc                                                                   >  1:2439293/1‑93 (MQ=255)

                      tcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCt                                                                  >  1:3605153/1‑93 (MQ=255)

                       caacaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTc                                                                 >  1:3624594/1‑93 (MQ=255)

                       caacaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTc                                                                 <  1:1789077/93‑1 (MQ=255)

                        aacaaTCGCGCTTCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCa                                                                >  1:1477147/1‑93 (MQ=255)

                             tCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCt                                                           <  2:3541278/93‑1 (MQ=255)

                               gcgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGa                                                         <  1:485483/93‑1 (MQ=255)

                               gcgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGa                                                         >  2:572906/1‑93 (MQ=255)

                               gcgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGa                                                         <  1:3711099/93‑1 (MQ=255)

                                cgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGAt                                                        <  2:4074385/93‑1 (MQ=255)

                                cgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGAt                                                        >  2:260474/1‑93 (MQ=255)

                                cgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGAt                                                        <  2:2292771/93‑1 (MQ=255)

                                 gcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATg                                                       <  2:4122309/93‑1 (MQ=255)

                                 gcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATg                                                       >  1:4308783/1‑93 (MQ=255)

                                  cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg                                                      >  1:4242666/1‑93 (MQ=255)

                                  cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg                                                      <  1:2129644/93‑1 (MQ=255)

                                     cgcgAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGgtgt                                                   <  1:3192076/93‑1 (MQ=255)

                                       cgAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCg                                                 <  1:4555902/93‑1 (MQ=255)

                                         aaCGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGcc                                               >  1:3534239/1‑93 (MQ=255)

                                         aaCGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGcc                                               <  2:404668/93‑1 (MQ=255)

                                         aaCGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGcc                                               >  1:3993864/1‑93 (MQ=255)

                                           cGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGt                                             <  2:2357244/93‑1 (MQ=255)

                                           cGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGt                                             >  1:2564732/1‑93 (MQ=255)

                                            gATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTa                                            >  1:4160748/1‑93 (MQ=255)

                                             aTCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTaa                                           >  2:2982662/1‑93 (MQ=255)

                                             aTCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTaa                                           <  1:1454002/93‑1 (MQ=255)

                                             aTCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTaa                                           <  1:117237/93‑1 (MQ=255)

                                              tCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAAt                                          >  1:2226837/1‑93 (MQ=255)

                                              tCAGGTTATCTTCATGTTCCACGACTTCAACGGGCGTTAAAAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAAt                                          >  2:3123660/1‑93 (MQ=255)

                                               cAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATc                                         >  1:2363536/1‑93 (MQ=255)

                                                aGGTTATCTTCATGTTCCATGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCa                                        >  2:4554479/1‑93 (MQ=255)

                                                aGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCa                                        >  2:4046379/1‑93 (MQ=255)

                                                 ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCaa                                       <  2:4684281/93‑1 (MQ=255)

                                                 ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCaa                                       <  1:3465249/93‑1 (MQ=255)

                                                 ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCaa                                       >  2:4534590/1‑93 (MQ=255)

                                                 ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCaa                                       <  1:2658010/93‑1 (MQ=255)

                                                 ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATAGTGTCGCCGTAATCaa                                       >  2:4351520/1‑93 (MQ=255)

                                                   ttATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGa                                     >  1:7765/1‑93 (MQ=255)

                                                    tATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGaa                                    <  1:481342/93‑1 (MQ=255)

                                                    tATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGaa                                    <  1:2896618/93‑1 (MQ=255)

                                                     aTCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCGAGaaa                                   >  1:3044569/1‑93 (MQ=255)

                                                     aTCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGaaa                                   <  2:4336418/93‑1 (MQ=255)

                                                      tCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAc                                  >  2:3594155/1‑93 (MQ=255)

                                                      tCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATAACCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAc                                  >  1:2513414/1‑93 (MQ=255)

                                                        ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg                                <  1:3964995/93‑1 (MQ=255)

                                                          cATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaa                              >  2:723913/1‑93 (MQ=255)

                                                           aTGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaaa                             >  2:1459484/1‑93 (MQ=255)

                                                           aTGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaaa                             >  1:1622758/1‑93 (MQ=255)

                                                            tGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAAc                            >  1:1471652/1‑93 (MQ=255)

                                                            tGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAAc                            >  1:1471653/1‑93 (MQ=255)

                                                             gTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACa                           <  2:1594117/93‑1 (MQ=255)

                                                             gTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACa                           >  1:3636012/1‑93 (MQ=255)

                                                              ttCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAg                          <  1:1581373/93‑1 (MQ=255)

                                                              ttCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAg                          <  2:2565039/93‑1 (MQ=255)

                                                               tCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGc                         >  2:710431/1‑93 (MQ=255)

                                                                ccACGCCTTCAACGGGCGTTAAGAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCg                        <  1:3347417/93‑1 (MQ=255)

                                                                ccACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCg                        <  1:4311862/93‑1 (MQ=255)

                                                                 cACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGt                       >  2:2292056/1‑93 (MQ=255)

                                                                  aCGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGtt                      <  1:4523334/93‑1 (MQ=255)

                                                                  aCGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGtt                      >  2:2660210/1‑93 (MQ=255)

                                                                  aCGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGtt                      >  1:2068387/1‑93 (MQ=255)

                                                                  aCGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACCGAAACAGCGtt                      >  2:3056014/1‑93 (MQ=255)

                                                                  aCGCCGTCAACGGGCGTTAACAGGCCAATATCCCCATCGTCACGAAGCTCGATGTTTATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGtt                      <  2:4634481/93‑1 (MQ=255)

                                                                    gCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTg                    >  1:1570424/1‑93 (MQ=255)

                                                                     ccTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGc                   >  2:3914703/1‑93 (MQ=255)

                                                                      cTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCa                  <  1:645092/93‑1 (MQ=255)

                                                                      cTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCa                  <  1:1269008/93‑1 (MQ=255)

                                                                        tCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGc                <  1:4563257/93‑1 (MQ=255)

                                                                        tCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGc                <  1:1987089/93‑1 (MQ=255)

                                                                         cAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCg               >  2:4223115/1‑93 (MQ=255)

                                                                          aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgt              >  2:4060041/1‑93 (MQ=255)

                                                                          aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgt              <  1:577784/93‑1 (MQ=255)

                                                                          aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgt              <  2:3567131/93‑1 (MQ=255)

                                                                              ggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTgg          >  2:1700724/1‑93 (MQ=255)

                                                                               gCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGt         <  2:3491968/93‑1 (MQ=255)

                                                                                 gTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTaa       <  1:4527469/93‑1 (MQ=255)

                                                                                  ttAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAc      >  1:898292/1‑93 (MQ=255)

                                                                                     aCAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCAt   <  2:4073027/93‑1 (MQ=255)

                                                                                     aCAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCAt   <  2:3823496/93‑1 (MQ=255)

                                                                                      cAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATc  <  1:2713931/93‑1 (MQ=255)

CCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATC  >  NC_000913/1261856‑1262034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`