BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,279,780	T→C	W232R (TGG→CGG)	narG →	nitrate reductase 1 alpha subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,279,780	0	T	C	100.0%	346.4 / NA	111	W232R (TGG→CGG)	narG	nitrate reductase 1 alpha subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/45); total (66/45)

Only 100 of 116 total aligned reads displayed.

TCGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCTGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGACGCGT  >  NC_000913/1279690‑1279869

tCGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCgg                                                                                         >  2:3929938/1‑93 (MQ=255)

tCGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCgg                                                                                         <  1:4001829/93‑1 (MQ=255)

 cGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCggg                                                                                        <  1:2731443/93‑1 (MQ=255)

   ggTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGc                                                                                      <  1:1284713/93‑1 (MQ=255)

   ggTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGc                                                                                      >  1:370119/1‑93 (MQ=255)

   ggTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGc                                                                                      >  2:3295713/1‑93 (MQ=255)

   ggTGCACGCTATCTCTCGCTCATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGc                                                                                      <  1:3127884/93‑1 (MQ=255)

     tGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGa                                                                                    >  2:498783/1‑93 (MQ=255)

        aCGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCa                                                                                 >  2:4140421/1‑93 (MQ=255)

         cGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCaa                                                                                <  2:2292949/93‑1 (MQ=255)

          gCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGCCTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCaaa                                                                               <  2:3475717/93‑1 (MQ=255)

            tATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACt                                                                             >  2:310903/1‑93 (MQ=255)

            tATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACt                                                                             <  1:3070296/93‑1 (MQ=255)

             aTCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTg                                                                            >  1:4417768/1‑93 (MQ=255)

              tctctcGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGa                                                                           <  2:2646185/93‑1 (MQ=255)

              tctctcGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGa                                                                           <  1:4406875/93‑1 (MQ=255)

              tctctcGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGa                                                                           <  2:3757902/93‑1 (MQ=255)

               ctctcGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGAc                                                                          >  1:2893748/1‑93 (MQ=255)

               ctctcGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGAc                                                                          <  2:3719287/93‑1 (MQ=255)

                   cGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTATCCGCAAACCCGGGGCGAGCAAACTGACGTAc                                                                      >  1:3367655/1‑93 (MQ=255)

                      tGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGACTCCTGCGTCTCCGCAAACCCGGGGCGCGCCAACGGACGTACCgg                                                                   >  2:1769325/1‑93 (MQ=255)

                       gATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACTCGGGGCGAGCAAACTGACGTACCGGa                                                                  >  1:2751853/1‑93 (MQ=255)

                       gATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGa                                                                  >  2:2594823/1‑93 (MQ=255)

                          tGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAAtt                                                               >  2:2514248/1‑92 (MQ=255)

                          tGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATc                                                               <  2:2446656/93‑1 (MQ=255)

                           ggCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATct                                                              <  2:1358515/93‑1 (MQ=255)

                             cGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATctgc                                                            >  2:4191296/1‑93 (MQ=255)

                              ggTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATctgct                                                           <  2:3642901/93‑1 (MQ=255)

                               gTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATctgctg                                                          >  1:1188493/1‑93 (MQ=255)

                                tACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGa                                                         <  1:1917182/93‑1 (MQ=255)

                                tACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGa                                                         >  1:1903420/1‑93 (MQ=255)

                                tACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGa                                                         >  1:3791137/1‑93 (MQ=255)

                                 aCTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGAc                                                        <  2:1373663/93‑1 (MQ=255)

                                 aCTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGAc                                                        >  1:228785/1‑93 (MQ=255)

                                  cTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACt                                                       >  1:709115/1‑93 (MQ=255)

                                  cTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACt                                                       >  1:787147/1‑93 (MQ=255)

                                   ttGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTg                                                      >  1:2199677/1‑93 (MQ=255)

                                    tGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTgg                                                     <  2:828848/93‑1 (MQ=255)

                                      cTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTa                                                   >  2:515079/1‑93 (MQ=255)

                                       ttAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTAc                                                  >  2:3558450/1‑93 (MQ=255)

                                       ttAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTAc                                                  >  1:956089/1‑93 (MQ=255)

                                       ttAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTAc                                                  <  2:2350001/93‑1 (MQ=255)

                                         aaGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGGCTGGTACaa                                                >  1:458343/1‑93 (MQ=255)

                                         aaGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACaa                                                >  2:1909163/1‑93 (MQ=255)

                                          aGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAAc                                               <  1:4368820/93‑1 (MQ=255)

                                          aGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAAc                                               >  1:1440071/1‑93 (MQ=255)

                                          aGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAAc                                               <  1:1926135/93‑1 (MQ=255)

                                          aGCTTATACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAAc                                               >  2:4050383/1‑93 (MQ=255)

                                              tCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCa                                           <  2:2707256/93‑1 (MQ=255)

                                              tCTACGACTGGCACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTTAGTGGTACAACTCCa                                           >  1:1781552/1‑93 (MQ=25)

                                                tACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGc                                         <  2:135042/93‑1 (MQ=255)

                                                tACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGc                                         <  1:4084689/93‑1 (MQ=255)

                                                   gACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAc                                      >  2:1743076/1‑93 (MQ=255)

                                                   gACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAc                                      <  1:677978/93‑1 (MQ=255)

                                                   gACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAc                                      >  1:2835511/1‑93 (MQ=255)

                                                    gcTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAca                                     <  1:1063479/92‑1 (MQ=255)

                                                    aCTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAca                                     <  1:1147315/93‑1 (MQ=255)

                                                    aCTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAca                                     >  1:3120664/1‑93 (MQ=255)

                                                     cTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcat                                    >  2:2263679/1‑93 (MQ=255)

                                                     cTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcat                                    <  1:3419214/93‑1 (MQ=255)

                                                      tGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcatc                                   >  1:3225759/1‑93 (MQ=255)

                                                       ggTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcatca                                  <  1:2723489/93‑1 (MQ=255)

                                                       ggTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcatca                                  >  1:2815773/1‑93 (MQ=255)

                                                       ggTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcatca                                  >  2:3507848/1‑93 (MQ=255)

                                                        gTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcatcat                                 >  2:3178644/1‑93 (MQ=255)

                                                        gTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTAcatcat                                 >  2:3016346/1‑93 (MQ=255)

                                                         tACTGCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAACCTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTTCatcatc                                >  2:393882/1‑93 (MQ=255)

                                                             gCGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCt                            <  1:1373414/93‑1 (MQ=255)

                                                              cGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTg                           >  1:2305219/1‑93 (MQ=255)

                                                              cGACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGAAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTg                           >  1:4636953/1‑93 (MQ=255)

                                                               gACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGCCGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTgg                          <  1:947389/93‑1 (MQ=255)

                                                               gACTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTgg                          >  1:2016712/1‑93 (MQ=255)

                                                                gcTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTggg                         <  1:358548/92‑1 (MQ=255)

                                                                 cTTGCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTgggg                        <  2:2344589/93‑1 (MQ=255)

                                                                  tcgCCTCCTGCGCCTCCTCAAACCCGGGCCGAGCAAACTGACGTAGCGGAATCTGCTGGCTGGTACATCTCCAGCTACATCATCGCCTggggg                       <  2:4160698/91‑1 (MQ=18)

                                                                    gCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTc                     >  2:3992377/1‑93 (MQ=255)

                                                                    gCCTCCTGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTc                     >  1:536354/1‑93 (MQ=255)

                                                                       tcctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCaaa                  >  2:3454696/1‑93 (MQ=255)

                                                                       tcctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCaaa                  <  2:2208816/93‑1 (MQ=255)

                                                                       tcctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCaaa                  >  2:1576862/1‑93 (MQ=255)

                                                                       tcctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCaaa                  <  1:2436720/93‑1 (MQ=255)

                                                                        cctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAAc                 <  2:1287467/93‑1 (MQ=255)

                                                                         ctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACg                >  2:4469736/1‑93 (MQ=255)

                                                                         ctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACg                >  1:2717069/1‑93 (MQ=255)

                                                                         ctGCGTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACg                <  1:1751577/93‑1 (MQ=255)

                                                                            cGTCTCCGCAAACCCGTGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGc             <  2:1340903/93‑1 (MQ=255)

                                                                             gTCTCCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGcc            <  2:1939862/93‑1 (MQ=255)

                                                                               ctcctcAAGCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGc          <  2:760096/93‑1 (MQ=255)

                                                                                tcCGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCa         <  2:3030701/93‑1 (MQ=255)

                                                                                  cGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGa       <  2:1426657/93‑1 (MQ=255)

                                                                                  cGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGa       <  1:2360093/93‑1 (MQ=255)

                                                                                  cGCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGa       <  2:3283929/93‑1 (MQ=255)

                                                                                   gCAAACCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGAc      >  1:2030700/1‑93 (MQ=255)

                                                                                     aaaCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGAcgc    >  1:697324/1‑93 (MQ=255)

                                                                                      aaCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGAcgcg   >  2:470530/1‑93 (MQ=255)

                                                                                      aaCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGAcgcg   >  1:3984990/1‑93 (MQ=255)

                                                                                      aaCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGAcgcg   >  1:1634497/1‑93 (MQ=255)

                                                                                      aaCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGAcgcg   >  2:1672466/1‑93 (MQ=255)

                                                                                       aCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCGGCAGAcgcga  >  2:3227416/1‑92 (MQ=255)

                                                                                       aCCCGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGACGCGt  <  2:785471/93‑1 (MQ=255)

TCGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCTGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGACGCGT  >  NC_000913/1279690‑1279869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`