BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,291,867	A→G	R93R (CGT→CGC)	hns ←	DNA‑binding protein HLP‑II

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,291,867	0	A	G	100.0%	354.7 / NA	113	R93R (CGT→CGC)	hns	DNA‑binding protein HLP‑II
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (57/56); total (57/56)

Only 100 of 119 total aligned reads displayed.

CATTGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGACGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCAT  >  NC_000913/1291777‑1291956

cATTGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCg                                                                                         >  2:3062387/1‑93 (MQ=255)

 aTTGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGgcgc                                                                                        >  1:465464/1‑93 (MQ=255)

  ttGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCt                                                                                       <  1:174605/93‑1 (MQ=255)

   tGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTg                                                                                      <  1:1503275/93‑1 (MQ=255)

    gCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGa                                                                                     >  2:392980/1‑93 (MQ=255)

    gCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGa                                                                                     <  2:2530165/93‑1 (MQ=255)

    gCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGa                                                                                     >  2:1309577/1‑93 (MQ=255)

       tttttGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGTGCGCTGAGCa                                                                                  >  1:2563933/1‑93 (MQ=255)

       tttttGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCa                                                                                  <  2:4680150/93‑1 (MQ=255)

           tGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGtt                                                                              <  1:4539019/93‑1 (MQ=255)

             aTTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTa                                                                            <  1:4666051/93‑1 (MQ=255)

             aTTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTa                                                                            <  2:4338439/93‑1 (MQ=255)

              ttACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAg                                                                           >  2:1183205/1‑93 (MQ=255)

              ttACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAg                                                                           <  1:3213852/93‑1 (MQ=255)

               tACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGc                                                                          <  1:2999084/93‑1 (MQ=255)

               tACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGc                                                                          <  2:3013092/93‑1 (MQ=255)

               tACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGc                                                                          <  2:4076811/93‑1 (MQ=255)

                aCAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCt                                                                         <  1:2574653/93‑1 (MQ=255)

                   gCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTg                                                                      >  1:1471450/1‑93 (MQ=255)

                   gCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTg                                                                      >  1:4613105/1‑93 (MQ=255)

                     tGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGt                                                                    <  2:3226914/93‑1 (MQ=255)

                     tGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGt                                                                    >  1:4042679/1‑93 (MQ=255)

                     tGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGt                                                                    <  1:1149290/93‑1 (MQ=255)

                       gAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGc                                                                  >  2:866126/1‑93 (MQ=255)

                        aGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGcc                                                                 <  1:1997416/93‑1 (MQ=255)

                         gTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCa                                                                <  1:2954730/93‑1 (MQ=255)

                         gTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCa                                                                >  1:1192426/1‑93 (MQ=255)

                         gTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCa                                                                >  2:4300844/1‑93 (MQ=255)

                          tACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAg                                                               <  2:833256/93‑1 (MQ=255)

                           aCGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGa                                                              <  2:4404667/93‑1 (MQ=255)

                           aCGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGa                                                              <  2:4404668/93‑1 (MQ=255)

                            cGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGAt                                                             <  2:19292/93‑1 (MQ=255)

                              gCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGAttt                                                           >  2:2252831/1‑93 (MQ=255)

                              gCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGAttt                                                           >  1:3355800/1‑93 (MQ=255)

                                 ttGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAAc                                                        >  2:2262673/1‑93 (MQ=255)

                                  tGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACg                                                       >  1:2836678/1‑93 (MQ=255)

                                    gCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGgc                                                     <  1:627421/93‑1 (MQ=255)

                                     ccAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGgca                                                    >  1:1315196/1‑93 (MQ=255)

                                       aGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGgcagc                                                  >  1:4221139/1‑93 (MQ=255)

                                        gTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGgcagca                                                 >  2:4509274/1‑93 (MQ=255)

                                         tCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCaa                                                >  2:3334780/1‑93 (MQ=255)

                                          ccAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAg                                               >  1:708180/1‑93 (MQ=255)

                                            aGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGc                                             >  1:1502794/1‑93 (MQ=255)

                                             ggTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCt                                            >  2:115342/1‑93 (MQ=255)

                                             ggTTTTAGTTTCGCCGTTTTCGTCAACGCAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCt                                            >  2:4636721/1‑93 (MQ=255)

                                              gTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTa                                           <  2:1566193/93‑1 (MQ=255)

                                              gTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTa                                           <  1:108959/93‑1 (MQ=255)

                                               ttttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAt                                          >  1:840020/1‑93 (MQ=255)

                                                tttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAtt                                         <  2:1066823/93‑1 (MQ=255)

                                                tttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAtt                                         >  2:120320/1‑93 (MQ=255)

                                                tttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTAtt                                         <  2:2750900/93‑1 (MQ=255)

                                                 ttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTc                                        <  2:892025/93‑1 (MQ=255)

                                                 ttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTc                                        <  1:1211807/93‑1 (MQ=255)

                                                 ttAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTc                                        >  2:1703984/1‑93 (MQ=255)

                                                  tAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTca                                       <  2:3404671/93‑1 (MQ=255)

                                                    gTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTcagc                                     >  1:857574/1‑93 (MQ=255)

                                                     tttCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTcagca                                    <  2:2088722/93‑1 (MQ=255)

                                                     tttCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTcagca                                    <  2:1559920/93‑1 (MQ=255)

                                                      ttCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTcagcag                                   <  2:336091/93‑1 (MQ=255)

                                                      ttCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTcagcag                                   <  1:1704353/93‑1 (MQ=255)

                                                       tCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgt                                  >  1:3425819/1‑93 (MQ=255)

                                                        cGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgtt                                 <  2:1985871/93‑1 (MQ=255)

                                                         gCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttc                                <  1:2321383/93‑1 (MQ=255)

                                                         gCCGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttc                                >  2:732824/1‑93 (MQ=255)

                                                          ccGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcg                               >  2:3850918/1‑93 (MQ=255)

                                                           cGTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgt                              >  1:2100301/1‑93 (MQ=255)

                                                            gTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgtt                             <  1:552747/93‑1 (MQ=255)

                                                            gTTTTCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgtt                             >  2:582885/1‑93 (MQ=255)

                                                             ttttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgttc                            >  2:3216080/1‑93 (MQ=255)

                                                             ttttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgttc                            <  1:1051732/93‑1 (MQ=255)

                                                             ttttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAgttcgttc                            >  2:1781320/1‑93 (MQ=255)

                                                              tttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGttcgttcg                           >  1:3468280/1‑93 (MQ=255)

                                                              tttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGttcgttcg                           >  2:4340955/1‑93 (MQ=255)

                                                              tttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGttcgttcg                           <  2:3834663/93‑1 (MQ=255)

                                                               ttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCgg                          >  2:1938185/1‑93 (MQ=255)

                                                               ttCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCgg                          <  1:1983474/93‑1 (MQ=255)

                                                                tCGTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCggg                         <  2:3081817/93‑1 (MQ=255)

                                                                  gTCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTc                       >  1:3898427/1‑93 (MQ=255)

                                                                   tCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCa                      >  1:1943862/1‑93 (MQ=255)

                                                                   tCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCa                      >  2:1567217/1‑93 (MQ=255)

                                                                   tCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCa                      >  1:783305/1‑93 (MQ=255)

                                                                   tCAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCa                      >  1:2573861/1‑93 (MQ=255)

                                                                    cAACGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCaa                     <  1:4451315/93‑1 (MQ=255)

                                                                     aaCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAAt                    <  2:2438322/93‑1 (MQ=255)

                                                                      aCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGGTATTCAGCAGTTCGTTCGGGTCAATa                   >  1:1929266/1‑93 (MQ=255)

                                                                      aCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATa                   <  2:4135570/93‑1 (MQ=255)

                                                                      aCGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATa                   <  1:2670633/93‑1 (MQ=255)

                                                                       cGTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATAc                  <  1:1942016/93‑1 (MQ=255)

                                                                        gTAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATAcc                 >  2:851890/1‑93 (MQ=255)

                                                                         tAGCTATATTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCg                >  2:204143/1‑93 (MQ=255)

                                                                               tatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAggg          >  2:1897994/1‑91 (MQ=255)

                                                                               tatTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCg          >  1:4324926/1‑93 (MQ=255)

                                                                                atTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGa         >  1:553870/1‑93 (MQ=255)

                                                                                atTTTGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGa         <  2:4132403/93‑1 (MQ=255)

                                                                                 ttttGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCATCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGAt        >  1:2686074/1‑93 (MQ=255)

                                                                                  tttGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATc       <  1:601727/93‑1 (MQ=255)

                                                                                   ttGCCGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCa      <  1:3353634/93‑1 (MQ=255)

                                                                                    tGCCGGTCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAATGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAg     <  1:2195198/93‑1 (MQ=255)

                                                                                       cGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCAt  <  2:2871335/93‑1 (MQ=255)

                                                                                       cGGGCGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGGCAATACCGTCAGCGATCAGCAt  >  2:4483573/1‑93 (MQ=255)

CATTGCTTTTTTGATTACAGCTGGAGTACGGCCTTGGCCAGTCCAGGTTTTAGTTTCGCCGTTTTCGTCAACGTAGCTATATTTTGCCGGACGCTGAGCACGTTTAGCTTTGGTGCCAGATTTAACGGCAGCAAGGCTATTCAGCAGTTCGTTCGGGTCAATACCGTCAGCGATCAGCAT  >  NC_000913/1291777‑1291956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`