BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,311,690	A→G	intergenic (‑3/‑354)	yciC ← / → yciD	hypothetical protein/putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,311,690	0	A	G	100.0%	370.2 / NA	118	intergenic (‑3/‑354)	yciC/yciD	hypothetical protein/putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (54/64); total (54/64)

Only 100 of 120 total aligned reads displayed.

TAGCAACGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCACTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATGGAAAA  >  NC_000913/1311601‑1311779

tAGCAACGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGctc                                                                                        >  2:2798234/1‑93 (MQ=255)

tAGCAACGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGctc                                                                                        >  2:1037618/1‑93 (MQ=255)

   cAACGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTcc                                                                                     <  1:1419660/93‑1 (MQ=255)

   cAACGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTcc                                                                                     <  1:3863007/93‑1 (MQ=255)

    aaCGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCt                                                                                    <  1:1059105/93‑1 (MQ=255)

    aaCGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCt                                                                                    >  1:4283713/1‑93 (MQ=255)

     aCGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCtt                                                                                   >  2:2689041/1‑93 (MQ=255)

       gATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGa                                                                                 >  2:2634150/1‑93 (MQ=255)

       gATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGa                                                                                 >  1:4547042/1‑93 (MQ=255)

        aTACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAg                                                                                >  2:748370/1‑93 (MQ=255)

        aTACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAg                                                                                <  2:721409/93‑1 (MQ=255)

        aTACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAg                                                                                <  2:3137141/93‑1 (MQ=255)

        aTACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAg                                                                                >  2:4339612/1‑93 (MQ=255)

         tACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGt                                                                               >  2:3518235/1‑93 (MQ=255)

         tACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGt                                                                               >  2:3007071/1‑93 (MQ=255)

          aCCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGtt                                                                              <  2:4045060/93‑1 (MQ=255)

            cAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGtttt                                                                            <  1:2794453/93‑1 (MQ=255)

             aaCAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTa                                                                           >  1:999121/1‑93 (MQ=255)

             aaCAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGACACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTa                                                                           >  1:2506604/1‑93 (MQ=255)

              aCAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTAt                                                                          >  1:2233745/1‑93 (MQ=255)

              aCAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTAt                                                                          >  2:3399315/1‑93 (MQ=255)

              aCAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTAt                                                                          >  1:1821635/1‑93 (MQ=255)

               cAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATg                                                                         >  1:2595970/1‑93 (MQ=255)

                 gAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCa                                                                       <  1:2481231/93‑1 (MQ=255)

                 gAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCa                                                                       >  2:88801/1‑93 (MQ=255)

                 gAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCa                                                                       >  1:4002040/1‑93 (MQ=255)

                   aTGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAgg                                                                     <  2:4401103/93‑1 (MQ=255)

                    tGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGgt                                                                    >  2:3274171/1‑93 (MQ=255)

                    tGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGgt                                                                    >  1:4409673/1‑93 (MQ=255)

                    tGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGgt                                                                    <  2:3062938/93‑1 (MQ=255)

                     ggTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGgtg                                                                   >  2:3599164/1‑93 (MQ=255)

                     ggTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGgtg                                                                   <  2:633449/93‑1 (MQ=255)

                       tCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGtt                                                                 <  2:3965603/93‑1 (MQ=255)

                        cATAAATTGATTACGGAAGAAATTTGCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTa                                                                <  1:3183694/93‑1 (MQ=255)

                         aTAAATTGATTACGTAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTaa                                                               <  1:2913132/93‑1 (MQ=255)

                         aTAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTaa                                                               >  2:3097903/1‑93 (MQ=255)

                          tAAATTGATAACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAAt                                                              <  2:4163450/93‑1 (MQ=255)

                           aaaTTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAAtt                                                             >  2:3399741/1‑93 (MQ=255)

                            aaTTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTa                                                            <  2:1540318/93‑1 (MQ=255)

                            aaTTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTa                                                            <  2:121491/93‑1 (MQ=255)

                            aaTTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTa                                                            >  1:3196720/1‑93 (MQ=255)

                             aTTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAg                                                           >  2:2804550/1‑93 (MQ=255)

                              ttGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGc                                                          >  1:678363/1‑93 (MQ=255)

                              ttGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGc                                                          <  1:4368166/93‑1 (MQ=255)

                                gATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCgg                                                        <  2:1025519/93‑1 (MQ=255)

                                gATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCgg                                                        <  1:2165377/93‑1 (MQ=255)

                                gATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCgg                                                        >  1:3988608/1‑93 (MQ=255)

                                gATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCgg                                                        >  2:2069360/1‑93 (MQ=255)

                                     cGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAAt                                                   <  1:4514886/93‑1 (MQ=255)

                                     cGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAAt                                                   <  2:3425354/93‑1 (MQ=255)

                                     cGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAAt                                                   >  1:250610/1‑93 (MQ=255)

                                      ggAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAAtt                                                  <  1:4628304/93‑1 (MQ=255)

                                       gaagaaATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTg                                                 >  2:4663746/1‑93 (MQ=255)

                                       gaagaaATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTg                                                 <  1:4240001/93‑1 (MQ=255)

                                        aagaaATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGt                                                >  1:600372/1‑93 (MQ=255)

                                         agaaATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTa                                               >  1:3720401/1‑93 (MQ=255)

                                         agaaATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTa                                               <  2:217616/93‑1 (MQ=255)

                                          gaaATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTAc                                              <  1:225597/93‑1 (MQ=255)

                                          gaaATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTAc                                              >  2:3452072/1‑93 (MQ=255)

                                            aaTTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTAccc                                            <  2:2792450/93‑1 (MQ=255)

                                            aaTTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTAccc                                            <  1:1099367/93‑1 (MQ=255)

                                            aaTTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTAccc                                            >  1:776725/1‑93 (MQ=255)

                                             aTTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCt                                           <  2:476013/93‑1 (MQ=255)

                                              tttCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTg                                          >  1:2821551/1‑93 (MQ=255)

                                              tttCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTg                                          <  1:2924764/93‑1 (MQ=255)

                                                   ggTGTCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTaa                                     <  2:2877662/93‑1 (MQ=255)

                                                       tCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCt                                 <  1:1965085/93‑1 (MQ=255)

                                                       tCACGGTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCt                                 <  2:1279912/93‑1 (MQ=255)

                                                           ggTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCggg                             <  2:4655219/93‑1 (MQ=255)

                                                           ggTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCggg                             >  1:4486847/1‑93 (MQ=255)

                                                           ggTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCggg                             <  1:4664712/93‑1 (MQ=255)

                                                            gTATACGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGt                            <  1:3014933/93‑1 (MQ=255)

                                                             tataCGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTg                           >  1:155363/1‑93 (MQ=255)

                                                               taCGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGgc                         <  1:1428856/93‑1 (MQ=255)

                                                               taCGGACTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGgc                         >  2:2256954/1‑93 (MQ=255)

                                                                    aCTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCAt                    >  1:4093107/1‑93 (MQ=255)

                                                                     cTGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATc                   <  2:1988058/93‑1 (MQ=255)

                                                                      tGCGCCGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCa                  <  1:3284669/93‑1 (MQ=255)

                                                                          ccGTTATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTc              <  2:2145031/93‑1 (MQ=255)

                                                                          ccGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTc              <  2:2061125/93‑1 (MQ=255)

                                                                           cGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCt             <  2:4187537/93‑1 (MQ=255)

                                                                           cGTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCt             <  2:1196118/93‑1 (MQ=255)

                                                                            gTGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCtt            >  2:1960357/1‑93 (MQ=255)

                                                                             tGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTg           <  2:3124273/93‑1 (MQ=255)

                                                                             tGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTg           >  2:3475175/1‑93 (MQ=255)

                                                                             tGATAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTg           >  1:3487215/1‑93 (MQ=255)

                                                                               aTAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTa         <  2:3738169/93‑1 (MQ=255)

                                                                               aTAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTa         >  1:3977090/1‑93 (MQ=255)

                                                                               aTAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTa         <  1:4663794/93‑1 (MQ=255)

                                                                               aTAGACATGCGCTCTCCTTGAGTTTCATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTa         <  1:4529264/93‑1 (MQ=255)

                                                                                tAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTAt        <  1:4499770/93‑1 (MQ=255)

                                                                                tAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTAt        >  2:2954244/1‑93 (MQ=255)

                                                                                tAGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTAt        <  2:3324221/93‑1 (MQ=255)

                                                                                 aGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATg       <  2:2020830/93‑1 (MQ=255)

                                                                                 aGACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATg       <  1:2422706/93‑1 (MQ=255)

                                                                                  gACATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATgg      >  1:962011/1‑93 (MQ=255)

                                                                                   aCATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATGGa     >  1:3364782/1‑93 (MQ=255)

                                                                                    cATGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATGGaa    >  2:3530784/1‑93 (MQ=255)

                                                                                     aTGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGAGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATGGaaa   <  2:708470/93‑1 (MQ=255)

                                                                                      tGCGCTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATGGaaaa  <  2:1657197/93‑1 (MQ=255)

TAGCAACGATACCAACAGAATGGTCATAAATTGATTACGGAAGAAATTTCCGGTGTCACGGTATACGGACTGCGCCGTGATAGACATGCACTCTCCTTGAGTTTTATGCAGGTGTTAATTAGCGGGCAATTGTACCCTGGTTAAGCCTCGGGTGGCAGCATCAGGTCTTGTATGGAAAA  >  NC_000913/1311601‑1311779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`