BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,338,553	A→G	H96R (CAC→CGC)	yciS →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,338,553	0	A	G	99.0%	309.1 / ‑4.4	101	H96R (CAC→CGC)	yciS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (45/55); total (46/55)
Fisher's exact test for biased strand distribution p-value = 4.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.58e-01

Only 100 of 107 total aligned reads displayed.

GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCC  >  NC_000913/1338463‑1338642

gAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCt                                                                                         >  2:1161636/1‑93 (MQ=255)

 aGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTc                                                                                        <  1:3029383/93‑1 (MQ=255)

  gTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCg                                                                                       >  2:1233805/1‑93 (MQ=255)

  gTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCg                                                                                       >  2:3201586/1‑93 (MQ=255)

   ttCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGt                                                                                      >  2:5934/1‑93 (MQ=255)

    tCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTc                                                                                     >  2:2147761/1‑93 (MQ=255)

    tCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTc                                                                                     >  1:828630/1‑93 (MQ=255)

    tCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTc                                                                                     <  2:3432584/93‑1 (MQ=255)

     cGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCa                                                                                    <  1:1487502/93‑1 (MQ=255)

      gtgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAg                                                                                   <  2:2192337/93‑1 (MQ=255)

       tgtgTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGTAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgc                                                                                  <  1:451590/93‑1 (MQ=255)

       tgtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgc                                                                                  >  2:4131994/1‑93 (MQ=255)

        gtTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcg                                                                                 <  1:3863125/93‑1 (MQ=255)

         tttCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcgg                                                                                <  2:1607498/93‑1 (MQ=255)

         tttCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAgcgg                                                                                >  2:4024070/1‑93 (MQ=255)

            cccTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGa                                                                             >  1:4149832/1‑93 (MQ=255)

             ccTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGaa                                                                            <  2:3606868/93‑1 (MQ=255)

              cTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAg                                                                           >  1:1776879/1‑93 (MQ=255)

                ggCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGa                                                                         <  2:4266085/93‑1 (MQ=255)

                 gagcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGaa                                                                        <  1:856573/91‑1 (MQ=255)

                  cgcgcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAAt                                                                       <  2:3383493/93‑1 (MQ=255)

                    cgcgcTGAACGTAAAATAAAGCGACGGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATaa                                                                     <  2:2453183/93‑1 (MQ=255)

                     gcgcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAAc                                                                    >  1:1744012/1‑93 (MQ=255)

                      cgcTGAACGTAAAATAAAGCCACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACt                                                                   <  2:2430552/93‑1 (MQ=255)

                       gcTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCCCCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACtt                                                                  <  1:1362648/93‑1 (MQ=255)

                        cTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACttt                                                                 >  2:3269378/1‑93 (MQ=255)

                        cTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACttt                                                                 <  2:1830818/93‑1 (MQ=255)

                         tGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTc                                                                <  1:4302263/93‑1 (MQ=255)

                         tGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTc                                                                <  2:2079526/93‑1 (MQ=255)

                          gAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCt                                                               <  2:2994600/93‑1 (MQ=255)

                          gAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCt                                                               >  2:3486358/1‑93 (MQ=255)

                            aCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAt                                                             <  1:2673753/93‑1 (MQ=255)

                            aCGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTAt                                                             <  1:194079/93‑1 (MQ=255)

                              gTAAAATAAAGCGACTGGAAAACCAGCTTTCTCCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGc                                                           <  1:2126420/93‑1 (MQ=255)

                              gTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGc                                                           >  1:3062900/1‑93 (MQ=255)

                              gTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGc                                                           >  2:4143067/1‑93 (MQ=255)

                                aaaaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTg                                                         >  2:707573/1‑93 (MQ=255)

                                 aaaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTgg                                                        <  1:4298919/93‑1 (MQ=255)

                                 aaaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTgg                                                        >  2:67231/1‑93 (MQ=255)

                                  aaTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGa                                                       >  2:4169896/1‑93 (MQ=255)

                                   aTAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAg                                                      >  2:3603389/1‑93 (MQ=255)

                                    tAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgt                                                     <  1:4021863/93‑1 (MQ=255)

                                     aaaGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgtt                                                    <  2:2106155/93‑1 (MQ=255)

                                     aaaGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgtt                                                    <  1:238935/93‑1 (MQ=255)

                                     aaaGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgtt                                                    >  2:3035724/1‑93 (MQ=255)

                                       aGCGACTGGAAAGCCAGCTGTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgt                                                  <  1:2550757/93‑1 (MQ=255)

                                          gACTGTAAAACCAGCTTTCACCCGCGACGGACGTGGCTGTACTGCCGCGCTCGTCAGCTGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               <  1:2031475/93‑1 (MQ=255)

                                          gACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               >  2:3523059/1‑93 (MQ=255)

                                          gACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgt                                               >  2:4171123/1‑93 (MQ=255)

                                          gACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgctgttgt                                               >  2:4043306/1‑93 (MQ=255)

                                           aCTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAgttgttgtt                                              >  1:4221858/1‑93 (MQ=255)

                                            cTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGttt                                             >  2:3279749/1‑93 (MQ=255)

                                            cTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGttt                                             >  1:605316/1‑93 (MQ=255)

                                                  aaCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtt                                       >  1:2130824/1‑93 (MQ=255)

                                                  aaCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtt                                       <  1:7652/93‑1 (MQ=255)

                                                  aaCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtt                                       >  1:2296564/1‑93 (MQ=255)

                                                   aCCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCttt                                      <  2:2478013/93‑1 (MQ=255)

                                                    cgaGCTGTCACCCGCGACTGACGTTGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtttt                                     <  2:2147059/91‑1 (MQ=255)

                                                    ccAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCtttt                                     >  1:1967014/1‑93 (MQ=255)

                                                     cAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTg                                    >  2:1638943/1‑93 (MQ=255)

                                                      aGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGc                                   >  2:2149437/1‑93 (MQ=255)

                                                      aGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGc                                   <  1:3760828/93‑1 (MQ=255)

                                                      aGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGc                                   >  2:4531154/1‑93 (MQ=255)

                                                        cTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCt                                 >  2:1250892/1‑93 (MQ=255)

                                                         tttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGGCTg                                >  1:2585087/1‑93 (MQ=255)

                                                          ttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGt                               <  1:1506674/93‑1 (MQ=255)

                                                          ttCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGt                               >  2:3081711/1‑93 (MQ=255)

                                                           tCACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTa                              <  1:4045584/93‑1 (MQ=255)

                                                            cACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAg                             <  1:2652646/93‑1 (MQ=255)

                                                            cACCCGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAg                             >  1:1133623/1‑93 (MQ=255)

                                                              cccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGcc                           <  1:1290167/93‑1 (MQ=255)

                                                              cccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGcc                           >  2:153310/1‑93 (MQ=255)

                                                               ccGCGACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCg                          >  1:774209/1‑93 (MQ=255)

                                                                cgcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGc                         <  2:4034350/93‑1 (MQ=255)

                                                                 gcgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCt                        >  1:1974508/1‑93 (MQ=255)

                                                                  cgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTg                       <  1:1059286/93‑1 (MQ=255)

                                                                  cgACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTg                       >  1:4080027/1‑93 (MQ=255)

                                                                   gACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGc                      <  2:1924599/93‑1 (MQ=255)

                                                                   gACTGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGc                      <  2:1176532/93‑1 (MQ=255)

                                                                      tGACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTa                   <  2:4234925/93‑1 (MQ=255)

                                                                       gACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTAt                  <  2:112042/93‑1 (MQ=255)

                                                                       gACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTAt                  <  1:723906/93‑1 (MQ=255)

                                                                       gACGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTAt                  <  1:1216533/93‑1 (MQ=255)

                                                                       gACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTAt                  >  1:4117345/1‑93 (MQ=255)

                                                                        aCGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATg                 <  2:4629296/93‑1 (MQ=255)

                                                                        aCGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATg                 <  1:726947/93‑1 (MQ=255)

                                                                        aCGTGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATg                 <  1:221919/93‑1 (MQ=255)

                                                                           tGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCt              >  1:2639738/1‑93 (MQ=255)

                                                                           tGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCt              >  1:1732023/1‑93 (MQ=255)

                                                                           tGGCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCt              >  2:2450341/1‑93 (MQ=255)

                                                                            ggCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTg             <  1:67452/93‑1 (MQ=255)

                                                                             gCTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTgg            <  1:4392223/93‑1 (MQ=255)

                                                                              cTGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGt           <  1:4205573/93‑1 (MQ=255)

                                                                               tGTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGta          <  2:1848325/93‑1 (MQ=255)

                                                                                gTAGTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGtat         <  1:3323703/93‑1 (MQ=255)

                                                                                   gTGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATg      >  1:652927/1‑93 (MQ=255)

                                                                                    tGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATgg     <  1:2917881/93‑1 (MQ=255)

                                                                                    tGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATgg     <  1:1136028/93‑1 (MQ=255)

                                                                                    tGCCGCGCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATgg     <  1:97016/93‑1 (MQ=255)

                                                                                       cgcgCTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGcc  <  2:30275/93‑1 (MQ=255)

GAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAACTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCC  >  NC_000913/1338463‑1338642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`