BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,356,924	C→T	P96P (CCG→CCA)	ycjJ ←	putative amino acid/amine transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,356,924	0	C	T	100.0%	406.8 / NA	114	P96P (CCG→CCA)	ycjJ	putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (66/48); total (66/48)

Only 100 of 116 total aligned reads displayed.

GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013

ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         >  2:2546552/1‑93 (MQ=255)

 gagagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTggg                                                                                        >  1:3883774/1‑93 (MQ=255)

 gagagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTggg                                                                                        >  2:525521/1‑93 (MQ=255)

   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      >  1:3080561/1‑93 (MQ=255)

   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      >  1:700290/1‑93 (MQ=255)

     gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa                                                                                    >  2:2654307/1‑93 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   >  2:473692/1‑93 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   <  1:2715983/93‑1 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   <  2:1090280/93‑1 (MQ=255)

       tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc                                                                                  <  2:1894733/93‑1 (MQ=255)

        agatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCg                                                                                 >  1:2717584/1‑93 (MQ=255)

         gatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGa                                                                                <  2:2196482/93‑1 (MQ=255)

          atTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGat                                                                               >  1:3254509/1‑92 (MQ=255)

           ttttCGCCAACAAGACGTTTATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGatt                                                                              >  2:3280914/1‑91 (MQ=255)

           ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt                                                                              <  2:738399/93‑1 (MQ=255)

           ttttCCCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGGCGTGTGGGTTAATCGACt                                                                              <  1:3723726/93‑1 (MQ=255)

             ttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACttt                                                                            <  1:977492/93‑1 (MQ=255)

             ttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACttt                                                                            <  2:242171/93‑1 (MQ=255)

                gCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTgc                                                                         <  2:2853870/93‑1 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  2:1416205/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  2:4243662/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  1:1250751/1‑93 (MQ=255)

                    acaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGt                                                                     >  1:183437/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   <  2:3693679/93‑1 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  1:2990422/1‑93 (MQ=255)

                        gACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGt                                                                 >  2:2732996/1‑93 (MQ=255)

                          cGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAGTCGACTTTTGCGCGTAGGtat                                                               <  2:1530289/93‑1 (MQ=255)

                          cGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtat                                                               >  2:2692727/1‑93 (MQ=255)

                          cGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtat                                                               <  1:1049831/93‑1 (MQ=255)

                          cGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtat                                                               <  1:86953/93‑1 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              <  1:1228833/93‑1 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              >  1:678888/1‑93 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              <  1:2161162/93‑1 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              >  2:3123920/1‑93 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              >  1:2693597/1‑93 (MQ=255)

                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             >  2:1719299/1‑93 (MQ=255)

                             tAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAgg                                                            <  1:3886487/93‑1 (MQ=255)

                              aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc                                                           >  1:4283630/1‑93 (MQ=255)

                              aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc                                                           >  1:1343306/1‑93 (MQ=255)

                              aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc                                                           <  1:2706008/93‑1 (MQ=255)

                              aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc                                                           <  2:1839102/93‑1 (MQ=255)

                                tcatcGGCAAAAAGAGATAATCCAGCAGAGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGCAGGTATAGGccc                                                         >  2:1399675/1‑92 (MQ=255)

                                 catcGGCAAAAAGAGATAATCCAGCAGTGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGa                                                        <  1:3638780/93‑1 (MQ=255)

                                 catcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGa                                                        >  2:3216335/1‑93 (MQ=255)

                                  atcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGaa                                                       >  2:1783236/1‑93 (MQ=255)

                                  atcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGaa                                                       >  1:731111/1‑93 (MQ=255)

                                        aaaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCTGcc                                                 >  2:2147653/1‑93 (MQ=255)

                                        aaaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGcc                                                 >  1:286753/1‑93 (MQ=255)

                                        aaaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGcc                                                 >  1:1856626/1‑93 (MQ=255)

                                         aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt                                                >  1:3070594/1‑93 (MQ=255)

                                          aaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTc                                               >  2:1985551/1‑93 (MQ=255)

                                          aaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTc                                               <  2:3126742/93‑1 (MQ=255)

                                          aaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTc                                               >  2:2416382/1‑93 (MQ=255)

                                           aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc                                              >  1:1643309/1‑93 (MQ=255)

                                           aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc                                              >  1:3126417/1‑93 (MQ=255)

                                              agaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGa                                           >  1:2541550/1‑93 (MQ=255)

                                               gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGaa                                          >  2:772602/1‑93 (MQ=255)

                                               gaTAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGAATAGGCCGAACCGGCCTCCGGaa                                          >  2:3687998/1‑93 (MQ=255)

                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        >  1:4387402/1‑93 (MQ=255)

                                                   aTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTg                                      >  2:328474/1‑93 (MQ=255)

                                                   aTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTg                                      >  2:2530213/1‑93 (MQ=255)

                                                    tCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTgg                                     <  2:2170462/93‑1 (MQ=255)

                                                    tCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTgg                                     <  1:1644828/93‑1 (MQ=255)

                                                    accAGCAGCGATGACCAGCCGACCATAAAGCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTgg                                     <  2:4083896/92‑1 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc                                    <  2:3395320/93‑1 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc                                    >  2:4175559/1‑93 (MQ=255)

                                                       agcagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGa                                  >  2:1326087/1‑93 (MQ=255)

                                                       agcagcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGa                                  <  1:3043103/93‑1 (MQ=255)

                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              <  1:1620112/93‑1 (MQ=255)

                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  1:2260668/1‑93 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           >  2:4214865/1‑93 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           >  2:2195827/1‑93 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           >  2:1806256/1‑93 (MQ=255)

                                                                gACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTg                         >  1:236058/1‑93 (MQ=255)

                                                                   cAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCg                      >  1:2104080/1‑93 (MQ=255)

                                                                         aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg                >  1:2738798/1‑93 (MQ=255)

                                                                         aCCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg                >  2:3117611/1‑93 (MQ=255)

                                                                          ccATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGa               >  2:4603301/1‑93 (MQ=255)

                                                                          ccATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGa               <  2:760554/93‑1 (MQ=255)

                                                                           cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              <  1:1415163/93‑1 (MQ=255)

                                                                           cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              <  1:2692932/93‑1 (MQ=255)

                                                                           cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              >  2:1625370/1‑93 (MQ=255)

                                                                           cATAAAGCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              <  1:1218447/93‑1 (MQ=255)

                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            <  1:2095709/93‑1 (MQ=255)

                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            >  2:707581/1‑93 (MQ=255)

                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            <  2:4558221/93‑1 (MQ=255)

                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            >  1:618965/1‑93 (MQ=255)

                                                                              aaaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGc           <  1:171449/93‑1 (MQ=255)

                                                                              aaaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGc           <  1:3580615/93‑1 (MQ=255)

                                                                               aaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCg          <  1:1060819/93‑1 (MQ=255)

                                                                               aaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCg          >  2:1212720/1‑93 (MQ=255)

                                                                               aaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCg          >  1:854879/1‑93 (MQ=255)

                                                                                aTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCgg         >  2:2383887/1‑93 (MQ=255)

                                                                                  ccGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTa       <  2:235829/93‑1 (MQ=255)

                                                                                    gACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTaaa     >  1:3890681/1‑93 (MQ=255)

                                                                                    gACGTGTGGGTTAATCGACTGTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTaaa     <  1:3130582/93‑1 (MQ=255)

                                                                                     aCGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAAc    <  1:4099472/93‑1 (MQ=255)

                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   <  1:308199/93‑1 (MQ=255)

                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   <  1:2877867/93‑1 (MQ=255)

                                                                                       gtgtGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAg  >  2:2487575/1‑93 (MQ=255)

GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`