BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,376,771	C→T	G288G (GGC→GGT)	ycjT →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,376,771	0	C	T	99.2%	410.1 / NA	119	G288G (GGC→GGT)	ycjT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (56/61); total (58/61)
Fisher's exact test for biased strand distribution p-value = 4.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 127 total aligned reads displayed.

GTGCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGC  >  NC_000913/1376681‑1376860

gtgCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAAtggtgg                                                                                         <  2:3462140/93‑1 (MQ=255)

 tgCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATggtggc                                                                                        <  1:3178526/93‑1 (MQ=255)

 tgCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATggtggc                                                                                        <  1:3510839/93‑1 (MQ=255)

   cgcgcAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGa                                                                                      <  1:2764960/93‑1 (MQ=255)

    gcgcAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGaa                                                                                     >  1:4186159/1‑93 (MQ=255)

         gcagAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCa                                                                                >  2:3513393/1‑93 (MQ=255)

         gcagAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCa                                                                                >  2:2764429/1‑93 (MQ=255)

            gagTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGa                                                                             <  1:969806/93‑1 (MQ=255)

            gagTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGa                                                                             >  2:2611495/1‑93 (MQ=255)

              gTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATc                                                                           <  1:4667056/93‑1 (MQ=255)

              gTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATc                                                                           <  1:476376/93‑1 (MQ=255)

               ttACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCa                                                                          <  2:1640363/93‑1 (MQ=255)

                tACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAg                                                                         >  2:320668/1‑93 (MQ=255)

                 aCGGCCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGc                                                                        <  1:4371153/93‑1 (MQ=255)

                  cGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCa                                                                       <  2:1139371/93‑1 (MQ=255)

                   gACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCaa                                                                      <  2:4055975/93‑1 (MQ=255)

                   gACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCaa                                                                      <  2:3804654/93‑1 (MQ=255)

                    aCCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAg                                                                     >  2:2172310/1‑93 (MQ=255)

                      cAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGACGCGCACGATCAGAAAGCg                                                                   >  1:3001751/1‑93 (MQ=255)

                      cAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCg                                                                   >  2:1163595/1‑93 (MQ=255)

                       aaCTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGt                                                                  >  1:1110203/1‑93 (MQ=255)

                       aaCTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGt                                                                  <  1:521338/93‑1 (MQ=255)

                       aaCTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGt                                                                  <  1:4291950/93‑1 (MQ=255)

                       aaCTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGt                                                                  <  1:1580942/93‑1 (MQ=255)

                        aCTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGtt                                                                 <  2:2774016/93‑1 (MQ=255)

                         cttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTa                                                                <  2:1499502/93‑1 (MQ=255)

                         cttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTa                                                                <  2:3065160/93‑1 (MQ=255)

                         cttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTa                                                                >  2:3174785/1‑93 (MQ=255)

                         cttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTa                                                                <  2:1118394/93‑1 (MQ=255)

                         cttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTa                                                                >  2:1958459/1‑93 (MQ=255)

                          ttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAg                                                               <  2:2992396/93‑1 (MQ=255)

                          ttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAg                                                               >  1:1053395/1‑93 (MQ=255)

                          ttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAg                                                               <  2:1678271/93‑1 (MQ=255)

                           tcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGa                                                              <  2:643091/93‑1 (MQ=255)

                            cttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGAt                                                             >  2:3585707/1‑93 (MQ=255)

                             ttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGAtt                                                            >  2:2310493/1‑93 (MQ=255)

                             ttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGAtt                                                            >  2:838221/1‑93 (MQ=255)

                             ttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGAtt                                                            >  2:2776022/1‑93 (MQ=255)

                              tGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTa                                                           >  2:2653566/1‑93 (MQ=255)

                               gcagcaTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTAt                                                          >  1:3112165/1‑93 (MQ=255)

                               gcagcaTCAACAGAAAACTGGAGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTAt                                                          >  1:283500/1‑93 (MQ=255)

                                  gcaTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgcg                                                       >  1:3289024/1‑93 (MQ=255)

                                  gcaTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgcg                                                       >  2:4334968/1‑93 (MQ=255)

                                   caTCAACAGAAAACTGGCGGCAATGGTGTCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgcgc                                                      <  2:4091634/93‑1 (MQ=255)

                                    aTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCt                                                     >  2:4481326/1‑93 (MQ=255)

                                    aTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCt                                                     <  2:1754363/93‑1 (MQ=255)

                                    aTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCt                                                     >  1:4156840/1‑93 (MQ=255)

                                     tCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCtt                                                    <  1:4404008/93‑1 (MQ=255)

                                     tCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCtt                                                    >  2:234719/1‑93 (MQ=255)

                                      cAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCttt                                                   <  1:2563590/93‑1 (MQ=255)

                                      cAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCttt                                                   <  2:2418778/93‑1 (MQ=255)

                                       aaCAGAAAGCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTa                                                  <  2:1238785/93‑1 (MQ=255)

                                       aaCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTa                                                  <  2:285026/93‑1 (MQ=255)

                                        aCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTat                                                 >  1:1237328/1‑93 (MQ=255)

                                        aCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTat                                                 >  1:576080/1‑93 (MQ=255)

                                        aCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTat                                                 >  1:3164433/1‑93 (MQ=255)

                                          aGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatca                                               >  2:123575/1‑93 (MQ=255)

                                          aGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatca                                               <  1:4470910/93‑1 (MQ=255)

                                          aGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatca                                               <  1:312132/93‑1 (MQ=255)

                                          aGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatca                                               <  1:4048670/93‑1 (MQ=255)

                                           gAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatcat                                              >  2:4286590/1‑93 (MQ=255)

                                            aaaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatcatc                                             <  2:812483/93‑1 (MQ=255)

                                            aaaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTCTatcatc                                             <  2:4456871/93‑1 (MQ=255)

                                             aaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCt                                            <  2:512292/93‑1 (MQ=255)

                                              aaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTg                                           >  2:1294442/1‑93 (MQ=255)

                                                 tGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTgcgc                                        >  2:1550951/1‑93 (MQ=255)

                                                      tCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCTGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGcatcat                                   >  1:4364083/1‑93 (MQ=255)

                                                       cAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATg                                  >  1:3406207/1‑93 (MQ=255)

                                                        aaTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGa                                 >  1:1194276/1‑93 (MQ=255)

                                                        aaTGGTGGCAGAAACGTCGTATCACGGTAAATGGAGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCAtgatga                                 >  1:1406218/1‑93 (MQ=255)

                                                         aTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGAc                                <  1:1768346/93‑1 (MQ=255)

                                                         aTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGAc                                <  2:1870912/93‑1 (MQ=255)

                                                           ggtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGc                              <  1:1163038/93‑1 (MQ=255)

                                                           ggtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGc                              >  2:1764832/1‑93 (MQ=255)

                                                           ggtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGc                              <  2:2401298/93‑1 (MQ=255)

                                                            gtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGcc                             >  2:1007589/1‑93 (MQ=255)

                                                            gtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGcc                             <  1:4617839/93‑1 (MQ=255)

                                                                 aGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGccc                        <  2:3656755/93‑1 (MQ=255)

                                                                  gAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCa                       >  1:2661898/1‑93 (MQ=255)

                                                                  gAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCa                       <  2:3860029/93‑1 (MQ=255)

                                                                  gAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCa                       >  2:2644800/1‑93 (MQ=255)

                                                                  gAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCa                       >  1:1587976/1‑93 (MQ=255)

                                                                   aaaCGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCac                      <  1:4214664/93‑1 (MQ=255)

                                                                   aaaCGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCac                      <  1:3706914/93‑1 (MQ=255)

                                                                    aaCGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacg                     >  2:4377671/1‑93 (MQ=255)

                                                                     aCGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacga                    >  2:1211889/1‑93 (MQ=255)

                                                                     aCGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacga                    <  1:4042830/93‑1 (MQ=255)

                                                                       gtcgtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacgacg                  >  1:2709238/1‑93 (MQ=255)

                                                                         cgtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacgacggg                <  2:2447975/93‑3 (MQ=255)

                                                                         cgtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAg                <  2:3411851/93‑1 (MQ=255)

                                                                          gtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGGgc               >  1:1975580/1‑93 (MQ=255)

                                                                          gtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAgc               <  1:2077339/93‑1 (MQ=255)

                                                                          gtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAgc               >  1:3313565/1‑93 (MQ=255)

                                                                          gtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAgc               <  2:2487950/93‑1 (MQ=255)

                                                                          gtATCACGGTAAATGGTGGCGAAGCGCACGAGCAGCAAGCGTTAGATTAGGCGCTTTATCATCTGCGCATGATGACGCCTGCCGacgacgcgg               >  2:26555/1‑90 (MQ=255)

                                                                             tCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgca            <  1:2028760/93‑1 (MQ=255)

                                                                              cACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgcag           >  1:2901391/1‑93 (MQ=255)

                                                                                cGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgcagca         <  2:569167/93‑1 (MQ=255)

                                                                                  gTAAATGGNGNCGAAGCGCACGATNANCANGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgcagcagc       <  2:904451/93‑1 (MQ=255)

                                                                                     aaTGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCAtt    <  2:4005968/93‑1 (MQ=255)

GTGCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGC  >  NC_000913/1376681‑1376860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`