BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,400,388	A→G	S298P (TCC→CCC)	b1337 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,400,388	0	A	G	100.0%	342.8 / NA	108	S298P (TCC→CCC)	b1337	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/52); total (56/52)

Only 100 of 111 total aligned reads displayed.

CAGTTCTTCGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGAACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATATGCT  >  NC_000913/1400299‑1400477

cAGTTCTTCGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACa                                                                                        <  2:3852474/93‑1 (MQ=255)

 aGTTCTTCGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAg                                                                                       >  2:3240659/1‑93 (MQ=255)

  gTTCTTCGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAgg                                                                                      >  1:4588221/1‑93 (MQ=255)

  gTTCTTCGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAgg                                                                                      <  2:2231971/93‑1 (MQ=255)

  gTTCTTCGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAgg                                                                                      <  1:3148142/93‑1 (MQ=255)

    tcttcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGTCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCt                                                                                    <  2:2321897/93‑1 (MQ=255)

    tcttcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCt                                                                                    >  2:4247752/1‑93 (MQ=255)

      ttcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCttt                                                                                  >  1:3088018/1‑93 (MQ=255)

      ttcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCttt                                                                                  >  1:1351625/1‑93 (MQ=255)

      ttcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCttt                                                                                  <  1:2387167/93‑1 (MQ=255)

      ttcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCttt                                                                                  <  1:1937436/93‑1 (MQ=255)

      ttcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGAGCGATTCGGGAGATAACTGGGACAGGCttt                                                                                  >  1:1298580/1‑93 (MQ=255)

      ttcGGAGTTCCATTCCGGGGTACCAAAAGGGAATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCttt                                                                                  <  1:3019850/93‑1 (MQ=255)

       tcGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTg                                                                                 <  2:1193933/93‑1 (MQ=255)

        cGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGt                                                                                <  1:4334298/93‑1 (MQ=255)

         ggAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTc                                                                               <  2:3392396/93‑1 (MQ=255)

         ggAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTc                                                                               >  2:2896667/1‑93 (MQ=255)

         ggAGTTCCATTCCGGGGAACCAAAATGGGATAGGTCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATCACTGGGACAGGCTTTGtg                                                                               >  2:1064620/1‑92 (MQ=255)

           aGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGa                                                                             <  1:3144021/93‑1 (MQ=255)

           aGTTCCATGCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGa                                                                             <  1:4075047/93‑1 (MQ=255)

            gTTCCATTCCGTGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATACCTGGGACAGGCTTTGTCGaa                                                                            <  2:4478902/93‑1 (MQ=255)

            gTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGGACATGGCATTTTCTAAGGTGCGGTTCGGGAGATAACTGGGACAGGCTTTGTCGaa                                                                            >  1:265478/1‑93 (MQ=255)

             ttCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAg                                                                           <  2:697399/93‑1 (MQ=255)

             ttCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAg                                                                           <  2:1550657/93‑1 (MQ=255)

             ttCCATTCCGGGGTACCAAAATGGCATAGGTCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAg                                                                           <  2:4484191/93‑1 (MQ=255)

              ttcATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGc                                                                          >  2:2957850/3‑93 (MQ=255)

               ccATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCg                                                                         >  1:1100648/1‑93 (MQ=255)

               ccATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCg                                                                         >  2:3988775/1‑93 (MQ=255)

                 aTTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGc                                                                       >  1:1902581/1‑93 (MQ=255)

                 aTTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGAGGc                                                                       >  2:1223537/1‑93 (MQ=255)

                     cGGTGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTc                                                                   <  1:339956/93‑1 (MQ=255)

                     cGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTc                                                                   <  1:2208738/93‑1 (MQ=255)

                     cGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTc                                                                   >  1:2028195/1‑93 (MQ=255)

                     cGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGCGACAGGCTTTGTCGAAGCGGCATTc                                                                   >  2:1675912/1‑93 (MQ=255)

                        ggTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAAc                                                                <  2:1284298/93‑1 (MQ=255)

                           aCCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGt                                                             >  2:4685291/1‑93 (MQ=255)

                           aCCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGt                                                             <  1:3682216/93‑1 (MQ=255)

                               aaaTGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGtt                                                         <  2:4370671/93‑1 (MQ=255)

                                aaTGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGttt                                                        >  1:136960/1‑93 (MQ=255)

                                 aTGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTc                                                       >  2:1728274/1‑93 (MQ=255)

                                 aTGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTc                                                       >  2:1210336/1‑93 (MQ=255)

                                 aTGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCCTTGTCGAAGCGGCATTCAACCGTGGTTTc                                                       >  2:427497/1‑93 (MQ=255)

                                  tGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCg                                                      <  1:4215986/93‑1 (MQ=255)

                                  tGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCg                                                      >  2:2744368/1‑93 (MQ=255)

                                   gggATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCgg                                                     <  2:900454/93‑1 (MQ=255)

                                     gATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCCACCGTGGTTTCGGtc                                                   >  2:3646196/1‑93 (MQ=255)

                                      aTAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGtca                                                  <  1:50101/93‑1 (MQ=255)

                                      aTAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGtca                                                  >  2:3531060/1‑93 (MQ=255)

                                        aGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGtcatc                                                >  1:2149698/1‑93 (MQ=255)

                                        aGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGtcatc                                                <  1:4090102/93‑1 (MQ=255)

                                          ggCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCaa                                              <  2:2513182/93‑1 (MQ=255)

                                          ggCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCaa                                              <  1:227647/93‑1 (MQ=255)

                                          ggCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCaa                                              <  1:1079299/93‑1 (MQ=255)

                                           gCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAAt                                             >  2:1709932/1‑93 (MQ=255)

                                             cTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGc                                           <  1:150400/93‑1 (MQ=255)

                                             cTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGc                                           <  2:4364898/93‑1 (MQ=255)

                                             cTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGc                                           <  2:1653229/93‑1 (MQ=255)

                                               ggTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCg                                         >  2:3332544/1‑93 (MQ=255)

                                               ggTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCg                                         >  1:1554756/1‑93 (MQ=255)

                                                gTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGc                                        >  1:231211/1‑93 (MQ=255)

                                                gTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGc                                        >  2:1870647/1‑93 (MQ=255)

                                                 tACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCa                                       >  1:932942/1‑93 (MQ=255)

                                                  aCATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCAc                                      >  2:2308197/1‑93 (MQ=255)

                                                    aTGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCt                                    >  1:2723991/1‑93 (MQ=255)

                                                    aTGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCt                                    >  2:1263345/1‑93 (MQ=255)

                                                      ggCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTc                                  <  2:4121861/93‑1 (MQ=255)

                                                      ggCATTGTCTAAGGGGCGATTCGGGAGATAACTGGGACAGGCTGTGTCGAAGCGGCATTCAACCGGGGTTGCGGTCATCAATGCCGCGCCTTc                                  <  2:2703523/93‑1 (MQ=255)

                                                       gCATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCg                                 >  2:706755/1‑93 (MQ=255)

                                                        cATTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCgg                                <  1:2141132/93‑1 (MQ=255)

                                                         aTTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGc                               <  1:998869/93‑1 (MQ=255)

                                                         aTTTTCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGc                               >  1:4670954/1‑93 (MQ=255)

                                                          ttttCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCg                              >  1:4455593/1‑93 (MQ=255)

                                                          ttttCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCg                              >  1:3805019/1‑93 (MQ=255)

                                                          ttttCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCg                              >  1:3830360/1‑93 (MQ=255)

                                                            ttCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGAt                            <  1:4600667/93‑1 (MQ=255)

                                                             tCTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGAtt                           >  1:1881965/1‑93 (MQ=255)

                                                              cTAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGAttt                          <  1:4308366/93‑1 (MQ=255)

                                                               tAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGAtttt                         >  1:1544441/1‑93 (MQ=255)

                                                               tAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGAtttt                         <  1:3785417/93‑1 (MQ=255)

                                                               tAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGAtttt                         <  2:3566421/93‑1 (MQ=255)

                                                               tAAGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGAtttt                         >  1:591078/1‑93 (MQ=255)

                                                                 aGGTGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTgg                       <  2:751282/93‑1 (MQ=255)

                                                                 aGGTGCGAGTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTgg                       <  2:3425365/93‑1 (MQ=255)

                                                                    tGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGa                    >  2:385197/1‑93 (MQ=255)

                                                                    tGCGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGa                    >  1:1396948/1‑93 (MQ=255)

                                                                      cGATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGAcc                  <  1:4324479/93‑1 (MQ=255)

                                                                       gATTCGGGAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGCCATCAATGCCGCACCTTCGGCGATTTTGGCGAcac                 >  1:4590501/1‑91 (MQ=255)

                                                                         ttCGGGAGATAACTGGGACATTCTTGGCCGAAGCGGCATTCAATTGTGGTTGCTGTCATCATTGCCGCACCTTCGTTGATTTTGGCTACCCGa               >  2:4686193/1‑93 (MQ=255)

                                                                             ggAGATAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCAt           >  2:1524963/1‑93 (MQ=255)

                                                                              gagaTAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATa          <  2:2149849/93‑1 (MQ=255)

                                                                                gaTAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATaaa        >  1:2501289/1‑93 (MQ=255)

                                                                                 aTAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAat       >  1:459502/1‑93 (MQ=255)

                                                                                  tAACTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAata      <  2:669832/93‑1 (MQ=255)

                                                                                   aaCTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAatat     >  2:4172399/1‑93 (MQ=255)

                                                                                    aCTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATAtg    <  1:245943/93‑1 (MQ=255)

                                                                                    aCTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATAtg    >  2:622401/1‑93 (MQ=255)

                                                                                    aCTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATAtg    <  2:120563/93‑1 (MQ=255)

                                                                                    aCTGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATAtg    >  1:1048153/1‑93 (MQ=255)

                                                                                     cTGGTACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATAtgc   <  2:808025/93‑1 (MQ=255)

                                                                                      tGGGACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATAtgct  <  1:3309840/93‑1 (MQ=255)

CAGTTCTTCGGAGTTCCATTCCGGGGTACCAAAATGGGATAGGGCCTGGTACATGGCATTTTCTAAGGTGCGATTCGGGAGATAACTGGAACAGGCTTTGTCGAAGCGGCATTCAACCGTGGTTTCGGTCATCAATGCCGCACCTTCGGCGATTTTGGCGACCCGATCATAAATATGCT  >  NC_000913/1400299‑1400477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`