Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,449,800 T→C T623A (ACC→GCC)  maoC ← putative aldehyde dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,449,8000TC98.2% 334.4 / ‑4.6 110T623A (ACC→GCC) maoCputative aldehyde dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (51/57);  total (52/58)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 110 total aligned reads displayed.

AGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC  >  NC_000913/1449711‑1449889
                                                                                         |                                                                                         
aGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATc                                                                                        <  1:631706/93‑1 (MQ=255)
aGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATc                                                                                        <  2:2989104/93‑1 (MQ=255)
aGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATc                                                                                        >  1:516113/1‑93 (MQ=255)
 gCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCg                                                                                       >  2:4424371/1‑93 (MQ=255)
 gCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCg                                                                                       >  2:1840135/1‑93 (MQ=255)
  cccATTGCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGc                                                                                      >  1:2763519/1‑93 (MQ=255)
   ccATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGcc                                                                                     <  2:726827/93‑1 (MQ=255)
     aTTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTg                                                                                   <  2:1548228/93‑1 (MQ=255)
      ttCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTgg                                                                                  >  1:2739160/1‑93 (MQ=255)
       tCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGc                                                                                 <  2:3798517/93‑1 (MQ=255)
        ccaccaCACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCt                                                                                >  2:377045/1‑93 (MQ=255)
          accacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCttt                                                                              <  1:4024919/93‑1 (MQ=255)
          accacACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCttt                                                                              >  1:2166554/1‑93 (MQ=255)
            cacaCCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTAAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTAc                                                                            <  1:1686484/93‑1 (MQ=255)
             acacCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACg                                                                           <  2:2275616/93‑1 (MQ=255)
               acCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTATggg                                                                         >  2:3826864/1‑93 (MQ=255)
               acCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACggg                                                                         >  2:2213127/1‑93 (MQ=255)
               acCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACggg                                                                         >  1:4264599/1‑93 (MQ=255)
                ccTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGt                                                                        >  1:541203/1‑93 (MQ=255)
                 cTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGtt                                                                       >  1:3066672/1‑93 (MQ=255)
                 cTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGtt                                                                       <  1:1079546/93‑1 (MQ=255)
                  tGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGGACCTGGATGGCATCGCCTGGCTTTACGGGTTc                                                                      >  2:2877430/1‑93 (MQ=255)
                  tGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTc                                                                      <  1:2340900/93‑1 (MQ=255)
                  tGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTc                                                                      >  2:2559377/1‑93 (MQ=255)
                   gTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCg                                                                     <  1:747422/93‑1 (MQ=255)
                     tGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGAt                                                                   <  2:795557/93‑1 (MQ=255)
                      tgTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATa                                                                  <  1:430811/92‑1 (MQ=255)
                      ggTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATa                                                                  <  2:3671516/93‑1 (MQ=255)
                      ggTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATa                                                                  <  2:1689783/93‑1 (MQ=255)
                       gTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaa                                                                 >  2:684570/1‑93 (MQ=255)
                       gTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaa                                                                 >  2:1995194/1‑93 (MQ=255)
                         ttttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATaaaa                                                               <  2:1838288/93‑1 (MQ=255)
                          tttCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAAc                                                              >  1:1570046/1‑93 (MQ=255)
                             cttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCa                                                           >  2:3686067/1‑93 (MQ=255)
                              ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGcca                                                          >  2:1726286/1‑91 (MQ=255)
                              ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCaa                                                          <  2:4232645/93‑1 (MQ=255)
                              ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCaa                                                          >  2:3563174/1‑93 (MQ=255)
                              ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCaa                                                          <  2:2118046/93‑1 (MQ=255)
                              ttctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCaa                                                          >  1:3052311/1‑93 (MQ=255)
                               tctGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAg                                                         <  2:3657925/93‑1 (MQ=255)
                                 tGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCt                                                       <  1:3410785/93‑1 (MQ=255)
                                 tGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCt                                                       <  1:3071985/93‑1 (MQ=255)
                                  gcgcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCtt                                                      >  2:514160/1‑93 (MQ=255)
                                    gcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTc                                                    <  1:722303/93‑1 (MQ=255)
                                    gcTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTc                                                    <  1:3466712/93‑1 (MQ=255)
                                     cTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTcc                                                   <  1:4348912/93‑1 (MQ=255)
                                      tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa                                                  <  1:1675363/93‑1 (MQ=255)
                                      tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa                                                  >  1:2483327/1‑93 (MQ=255)
                                      tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa                                                  <  2:2300822/93‑1 (MQ=255)
                                      tACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCa                                                  >  1:4574813/1‑93 (MQ=255)
                                        cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc                                                >  2:2360792/1‑93 (MQ=255)
                                        cGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGc                                                >  1:118247/1‑93 (MQ=255)
                                          cTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGccc                                              <  1:3308310/93‑1 (MQ=255)
                                           tGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGCTGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCg                                             >  1:3626715/1‑93 (MQ=255)
                                           tGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCg                                             <  2:2349896/93‑1 (MQ=255)
                                            gTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGt                                            >  1:2285943/1‑93 (MQ=255)
                                             ttttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa                                           >  1:1829374/1‑93 (MQ=255)
                                             ttttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa                                           <  1:764412/93‑1 (MQ=255)
                                             ttttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTa                                           >  1:3288759/1‑93 (MQ=255)
                                               ttttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGt                                         <  2:1022418/93‑1 (MQ=255)
                                                tttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGtt                                        >  2:2586445/1‑93 (MQ=255)
                                                 ttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTa                                       <  2:1991012/93‑1 (MQ=255)
                                                 ttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTa                                       <  2:1971978/93‑1 (MQ=255)
                                                 ttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTa                                       <  1:2017493/93‑1 (MQ=255)
                                                 ttCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTa                                       <  1:4285072/93‑1 (MQ=255)
                                                  tCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAg                                      <  2:3492078/93‑1 (MQ=255)
                                                  tCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAg                                      <  2:1667366/93‑1 (MQ=255)
                                                   cAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGc                                     <  1:2644094/93‑1 (MQ=255)
                                                    aGCGTCTTGCGCTTACAGGTGAGACGCACCTTGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCa                                    >  1:1095729/1‑93 (MQ=255)
                                                    aGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCa                                    >  1:3095835/1‑93 (MQ=255)
                                                         cTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgac                               <  2:4157406/93‑1 (MQ=255)
                                                         cTTGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgac                               <  2:1180392/93‑1 (MQ=255)
                                                          ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacg                              >  2:4117797/1‑92 (MQ=255)
                                                          ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacc                              <  2:3331081/93‑1 (MQ=255)
                                                          ttGCGCTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgacc                              >  2:2232336/1‑93 (MQ=255)
                                                             cgcTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccgga                           >  2:2900049/1‑93 (MQ=255)
                                                              gcTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggac                          <  2:3011143/93‑1 (MQ=255)
                                                               cTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggacc                         <  2:4129048/93‑1 (MQ=255)
                                                               cTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggacc                         <  1:1632015/93‑1 (MQ=255)
                                                               cTTACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATgaccggacc                         >  2:1725167/1‑93 (MQ=255)
                                                                 tACAGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGa                       <  1:2308051/93‑1 (MQ=255)
                                                                    aGGTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGacac                    >  1:993479/1‑93 (MQ=255)
                                                                     ggTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAcc                   >  2:2751746/1‑93 (MQ=255)
                                                                     ggTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAcc                   >  1:3104429/1‑93 (MQ=255)
                                                                     ggTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAcc                   <  1:3983985/93‑1 (MQ=255)
                                                                     ggTGAGACGCACCTGGATGCTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACAcc                   <  1:3128026/93‑1 (MQ=255)
                                                                      gTGAGACGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCg                  <  2:1824815/93‑1 (MQ=255)
                                                                         agaCGCACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCa               <  1:2947059/93‑1 (MQ=255)
                                                                              cACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGAc          <  1:170858/93‑1 (MQ=255)
                                                                              cACCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGAc          <  2:3422536/93‑1 (MQ=255)
                                                                               aCCTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACa         >  1:3700276/1‑93 (MQ=255)
                                                                                ccTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACaa        >  1:3853268/1‑93 (MQ=255)
                                                                                 cTGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACaaa       >  2:3538860/1‑93 (MQ=255)
                                                                                  tGGATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAAc      >  1:927328/1‑93 (MQ=255)
                                                                                   ggATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACa     <  2:1644137/93‑1 (MQ=255)
                                                                                   ggATGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACa     >  2:1810179/1‑93 (MQ=255)
                                                                                     aTGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGa   >  1:3976743/1‑93 (MQ=255)
                                                                                     aTGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGa   >  2:2812320/1‑93 (MQ=255)
                                                                                      tGGCATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAc  >  2:2758365/1‑93 (MQ=255)
                                                                                      tGGCATCGCCTGGCTGTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAc  <  2:4503671/93‑1 (MQ=255)
                                                                                         |                                                                                         
AGCCCATTCCACCACACCTGTTGGTTTTTCTTCTGCGCTACGCTGTTTTTTCAGCGTCTTGCGCTTACAGGTGAGACGCACCTGGATGGTATCGCCTGGCTTTACGGGTTCGATAAAACGCAAGCTTTCCAGCCCGTAGTTAGCAATGACCGGACCGACACCGGCATCGACAAACAGAC  >  NC_000913/1449711‑1449889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: